RNA–Protein interactions for RNA: ENSMUST00000087253.10

Tro-201, Transcript of Tro protein, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Tro, Length 3,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tro-201ENSMUST00000087253 Trpm3Q5F4S9 1721 aa12.98□□□□□ -0.33
Tro-201ENSMUST00000087253 Cdk12Q14AX6 1484 aaKnown RBP12.98□□□□□ -0.33
Tro-201ENSMUST00000087253 Txndc2Q6P902 515 aa12.98□□□□□ -0.33
Tro-201ENSMUST00000087253 Erich6bQ9D4S6 220 aa12.98□□□□□ -0.33
Tro-201ENSMUST00000087253 Col18a1P39061 1774 aa12.98□□□□□ -0.33
Tro-201ENSMUST00000087253 Mcm10Q0VBD2 885 aa12.97□□□□□ -0.33
Tro-201ENSMUST00000087253 Usp16Q99LG0 825 aa12.97□□□□□ -0.33
Tro-201ENSMUST00000087253 Nsd3Q6P2L6 1439 aa12.97□□□□□ -0.33
Tro-201ENSMUST00000087253 Triml2E9PW10 424 aa12.97□□□□□ -0.33
Tro-201ENSMUST00000087253 Rrp12Q6P5B0 1295 aaKnown RBP12.97□□□□□ -0.33
Tro-201ENSMUST00000087253 Astn2Q80Z10 1352 aa12.97□□□□□ -0.33
Tro-201ENSMUST00000087253 PtmaP26350 111 aa12.96□□□□□ -0.33
Tro-201ENSMUST00000087253 Ciz1Q8VEH2 845 aa12.96□□□□□ -0.33
Tro-201ENSMUST00000087253 CatipB9EKE5 520 aa12.96□□□□□ -0.33
Tro-201ENSMUST00000087253 Vamp4O70480 141 aa12.96□□□□□ -0.33
Tro-201ENSMUST00000087253 Cetn4Q8K4K1 168 aa12.96□□□□□ -0.33
Tro-201ENSMUST00000087253 Siglec1Q62230 1695 aa12.96□□□□□ -0.34
Tro-201ENSMUST00000087253 Q4VA45 678 aa12.96□□□□□ -0.34
Tro-201ENSMUST00000087253 Bloc1s4Q8VED2 215 aa12.96□□□□□ -0.34
Tro-201ENSMUST00000087253 Klhdc4Q921I2 584 aa12.96□□□□□ -0.34
Tro-201ENSMUST00000087253 Pibf1E9Q6K3 756 aa12.95□□□□□ -0.34
Tro-201ENSMUST00000087253 Casq1O09165 405 aa12.95□□□□□ -0.34
Tro-201ENSMUST00000087253 Cabp2Q9JLK4 216 aa12.95□□□□□ -0.34
Tro-201ENSMUST00000087253 Gli3Q61602 1583 aa12.95□□□□□ -0.34
Tro-201ENSMUST00000087253 Ankrd44B2RXR6 993 aa12.95□□□□□ -0.34
Tro-201ENSMUST00000087253 PaskQ8CEE6 1383 aa12.94□□□□□ -0.34
Tro-201ENSMUST00000087253 Chmp4cQ9D7F7 232 aa12.94□□□□□ -0.34
Tro-201ENSMUST00000087253 Trim27Q62158 513 aa12.94□□□□□ -0.34
Tro-201ENSMUST00000087253 Ric3Q8BPM6 367 aa12.94□□□□□ -0.34
Tro-201ENSMUST00000087253 Smarca5Q91ZW3 1051 aaKnown RBP12.94□□□□□ -0.34
Tro-201ENSMUST00000087253 LifrP42703 1092 aa12.93□□□□□ -0.34
Tro-201ENSMUST00000087253 Wwc1Q5SXA9 1104 aa12.93□□□□□ -0.34
Tro-201ENSMUST00000087253 Eif4g2Q62448 906 aaKnown RBP12.93□□□□□ -0.34
Tro-201ENSMUST00000087253 DmtnQ9WV69 405 aa12.93□□□□□ -0.34
Tro-201ENSMUST00000087253 Scaf1Q5U4C3 1256 aaKnown RBP12.93□□□□□ -0.34
Tro-201ENSMUST00000087253 PogkQ80TC5 607 aa12.93□□□□□ -0.34
Tro-201ENSMUST00000087253 GphnQ8BUV3 769 aaKnown RBP12.93□□□□□ -0.34
Tro-201ENSMUST00000087253 Bag4Q8CI61 457 aa12.93□□□□□ -0.34
Tro-201ENSMUST00000087253 FanclQ9CR14 375 aa12.93□□□□□ -0.34
Tro-201ENSMUST00000087253 Adgrb1Q3UHD1 1582 aa12.92□□□□□ -0.34
Tro-201ENSMUST00000087253 Gnai1B2RSH2 354 aa12.92□□□□□ -0.34
Tro-201ENSMUST00000087253 Rasa1E9PYG6 1038 aa12.92□□□□□ -0.34
Tro-201ENSMUST00000087253 Fchsd2Q3USJ8 740 aa12.92□□□□□ -0.34
Tro-201ENSMUST00000087253 Gnai3Q9DC51 354 aa12.92□□□□□ -0.34
Tro-201ENSMUST00000087253 Uhrf1bp1lA2RSJ4 1457 aa12.91□□□□□ -0.34
Tro-201ENSMUST00000087253 Ppp1r15aP17564 657 aa12.91□□□□□ -0.34
Tro-201ENSMUST00000087253 Q3UJC8 639 aa12.91□□□□□ -0.34
Tro-201ENSMUST00000087253 Chmp4bQ9D8B3 224 aaKnown RBP12.91□□□□□ -0.34
Tro-201ENSMUST00000087253 Ppip5k2Q6ZQB6 1129 aa12.9□□□□□ -0.34
Tro-201ENSMUST00000087253 Cc2d1aQ8K1A6 943 aa12.9□□□□□ -0.34
Tro-201ENSMUST00000087253 HnrnpmQ9D0E1 729 aaKnown RBP12.9□□□□□ -0.34
Tro-201ENSMUST00000087253 Nfat5Q9WV30 1534 aa12.9□□□□□ -0.34
Tro-201ENSMUST00000087253 Aifm3Q3TY86 605 aa12.9□□□□□ -0.34
Tro-201ENSMUST00000087253 Isy1Q69ZQ2 285 aaKnown RBP12.9□□□□□ -0.34
Tro-201ENSMUST00000087253 1700010I14RikQ7TPG0 532 aa12.9□□□□□ -0.34
Tro-201ENSMUST00000087253 Tmx3Q8BXZ1 456 aa12.9□□□□□ -0.34
Tro-201ENSMUST00000087253 Rbm10Q99KG3 930 aaKnown RBP12.9□□□□□ -0.34
Tro-201ENSMUST00000087253 Tns3Q5SSZ5 1440 aa12.89□□□□□ -0.35
Tro-201ENSMUST00000087253 Kdm4cQ8VCD7 1054 aa12.89□□□□□ -0.35
Tro-201ENSMUST00000087253 HnrnpuQ8VEK3 800 aaKnown RBP12.89□□□□□ -0.35
Tro-201ENSMUST00000087253 CalcaP70160 136 aa12.88□□□□□ -0.35
Tro-201ENSMUST00000087253 Ddrgk1Q80WW9 315 aa12.88□□□□□ -0.35
Tro-201ENSMUST00000087253 Dhx16G3X8X0 1044 aaKnown RBP12.87□□□□□ -0.35
Tro-201ENSMUST00000087253 Cgnl1Q6AW69 1298 aa12.87□□□□□ -0.35
Tro-201ENSMUST00000087253 Q9D2X8 372 aa12.87□□□□□ -0.35
Tro-201ENSMUST00000087253 Brwd3A2AHJ4 1799 aa12.87□□□□□ -0.35
Tro-201ENSMUST00000087253 Rad17Q6NXW6 688 aa12.86□□□□□ -0.35
Tro-201ENSMUST00000087253 Safb2Q80YR5 991 aaKnown RBP12.86□□□□□ -0.35
Tro-201ENSMUST00000087253 Scn4aQ9ER60 1841 aa12.86□□□□□ -0.35
Tro-201ENSMUST00000087253 Zkscan1Q8BGS3 561 aaKnown RBP12.86□□□□□ -0.35
Tro-201ENSMUST00000087253 CenppQ9CZ92 286 aa12.86□□□□□ -0.35
Tro-201ENSMUST00000087253 Arfgef2A2A5R2 1792 aa12.86□□□□□ -0.35
Tro-201ENSMUST00000087253 Pdia3P27773 505 aaKnown RBP12.85□□□□□ -0.35
Tro-201ENSMUST00000087253 EngaseQ8BX80 734 aa12.85□□□□□ -0.35
Tro-201ENSMUST00000087253 Ppp6r3Q922D4 844 aa12.85□□□□□ -0.35
Tro-201ENSMUST00000087253 Parp14Q2EMV9 1817 aa12.85□□□□□ -0.35
Tro-201ENSMUST00000087253 MpripP97434 1024 aa12.85□□□□□ -0.35
Tro-201ENSMUST00000087253 Rnf214Q8BFU3 668 aaKnown RBP12.85□□□□□ -0.35
Tro-201ENSMUST00000087253 Gdpd2Q9ESM6 539 aa12.85□□□□□ -0.35
Tro-201ENSMUST00000087253 Ltbp4Q8K4G1 1666 aa12.85□□□□□ -0.35
Tro-201ENSMUST00000087253 Ncapd2Q8K2Z4 1392 aa12.85□□□□□ -0.35
Tro-201ENSMUST00000087253 Pdia4P08003 638 aaKnown RBP12.84□□□□□ -0.35
Tro-201ENSMUST00000087253 Fam13aQ8BGI4 693 aa12.84□□□□□ -0.35
Tro-201ENSMUST00000087253 Rsph6aQ8CDR2 708 aa12.84□□□□□ -0.35
Tro-201ENSMUST00000087253 Ahnak2E9PYB0 1738 aaKnown RBP12.84□□□□□ -0.35
Tro-201ENSMUST00000087253 Abca15E9PWH4 1668 aa12.84□□□□□ -0.35
Tro-201ENSMUST00000087253 Rab11fip3Q8CHD8 1047 aa12.84□□□□□ -0.35
Tro-201ENSMUST00000087253 Tmem2Q5FWI3 1383 aa12.83□□□□□ -0.35
Tro-201ENSMUST00000087253 Nucb1Q02819 459 aaKnown RBP12.83□□□□□ -0.36
Tro-201ENSMUST00000087253 Gcc1Q9D4H2 778 aa12.83□□□□□ -0.36
Tro-201ENSMUST00000087253 Rbm27Q5SFM8 1060 aaKnown RBP12.83□□□□□ -0.36
Tro-201ENSMUST00000087253 Anapc15-psA0A140T8L6 141 aa12.83□□□□□ -0.36
Tro-201ENSMUST00000087253 Syce3B5KM66 88 aa12.83□□□□□ -0.36
Tro-201ENSMUST00000087253 Prkar2bP31324 416 aa12.83□□□□□ -0.36
Tro-201ENSMUST00000087253 Idi1P58044 227 aa12.83□□□□□ -0.36
Tro-201ENSMUST00000087253 VgfQ0VGU4 617 aa12.83□□□□□ -0.36
Tro-201ENSMUST00000087253 Aldh8a1Q8BH00 487 aa12.82□□□□□ -0.36
Tro-201ENSMUST00000087253 Nid2O88322 1403 aa12.82□□□□□ -0.36
Tro-201ENSMUST00000087253 Phactr2B1AVP0 632 aa12.81□□□□□ -0.36
Tro-201ENSMUST00000087253 Ggnbp2Q5SV77 696 aa12.81□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 123.8 ms