RNA–Protein interactions for RNA: ENSMUST00000081654.12

Col18a1-202, Transcript of Collagen alpha-1(XVIII) chain, mousemouse

TSL 1 (best) BASIC

Gene Col18a1, Length 5,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1-202ENSMUST00000081654 Tspyl2Q7TQI8 677 aa19.3■□□□□ 0.68
Col18a1-202ENSMUST00000081654 Disp1Q3TDN0 1521 aa19.3■□□□□ 0.68
Col18a1-202ENSMUST00000081654 Kiaa0753Q6A000 959 aa19.29■□□□□ 0.68
Col18a1-202ENSMUST00000081654 Ddx58Q6Q899 926 aa19.29■□□□□ 0.68
Col18a1-202ENSMUST00000081654 Brf1Q8CFK2 676 aa19.29■□□□□ 0.68
Col18a1-202ENSMUST00000081654 Zscan20B2KFW1 1030 aa19.29■□□□□ 0.68
Col18a1-202ENSMUST00000081654 Spty2d1Q68FG3 682 aa19.29■□□□□ 0.68
Col18a1-202ENSMUST00000081654 AidaQ8C4Q6 305 aa19.29■□□□□ 0.68
Col18a1-202ENSMUST00000081654 Ppp1r42Q8R1Z4 357 aa19.29■□□□□ 0.68
Col18a1-202ENSMUST00000081654 IkQ9Z1M8 557 aaKnown RBP19.29■□□□□ 0.68
Col18a1-202ENSMUST00000081654 Pip4k2aO70172 405 aa19.28■□□□□ 0.68
Col18a1-202ENSMUST00000081654 Klc3Q91W40 508 aa19.28■□□□□ 0.68
Col18a1-202ENSMUST00000081654 Pde4dQ01063 747 aa19.28■□□□□ 0.68
Col18a1-202ENSMUST00000081654 Fam193aQ8CGI1 1231 aaKnown RBP19.28■□□□□ 0.68
Col18a1-202ENSMUST00000081654 Dhx8A2A4P0 1244 aaKnown RBP19.28■□□□□ 0.68
Col18a1-202ENSMUST00000081654 Cyp26c1B2RXA7 518 aa19.27■□□□□ 0.68
Col18a1-202ENSMUST00000081654 Zrsr2Q62377 462 aaKnown RBP19.27■□□□□ 0.68
Col18a1-202ENSMUST00000081654 GpkowQ56A08 488 aa19.27■□□□□ 0.68
Col18a1-202ENSMUST00000081654 Bicdl1A0JNT9 577 aa19.27■□□□□ 0.68
Col18a1-202ENSMUST00000081654 Prpf4bQ61136 1007 aaKnown RBP19.27■□□□□ 0.68
Col18a1-202ENSMUST00000081654 Pms1Q8K119 917 aa19.27■□□□□ 0.68
Col18a1-202ENSMUST00000081654 EappQ5BU09 281 aa19.26■□□□□ 0.67
Col18a1-202ENSMUST00000081654 Acsbg1Q99PU5 721 aa19.26■□□□□ 0.67
Col18a1-202ENSMUST00000081654 TnmdQ9EP64 317 aa19.26■□□□□ 0.67
Col18a1-202ENSMUST00000081654 HmmrQ00547 794 aaKnown RBP19.26■□□□□ 0.67
Col18a1-202ENSMUST00000081654 Wasf1Q8R5H6 559 aa19.26■□□□□ 0.67
Col18a1-202ENSMUST00000081654 Slc5a4bQ91ZP4 660 aa19.26■□□□□ 0.67
Col18a1-202ENSMUST00000081654 Arid4aF8VPQ2 1261 aaKnown RBP19.25■□□□□ 0.67
Col18a1-202ENSMUST00000081654 Frmpd2A0A140LI67 1392 aa19.25■□□□□ 0.67
Col18a1-202ENSMUST00000081654 Rufy2Q8R4C2 606 aa19.25■□□□□ 0.67
Col18a1-202ENSMUST00000081654 Strn4P58404 760 aa19.25■□□□□ 0.67
Col18a1-202ENSMUST00000081654 WizO88286 1684 aaKnown RBP19.25■□□□□ 0.67
Col18a1-202ENSMUST00000081654 PaskQ8CEE6 1383 aa19.25■□□□□ 0.67
Col18a1-202ENSMUST00000081654 CastP51125 788 aa19.25■□□□□ 0.67
Col18a1-202ENSMUST00000081654 Dnajc2P54103 621 aaKnown RBP19.25■□□□□ 0.67
Col18a1-202ENSMUST00000081654 Kif20aP97329 887 aa19.25■□□□□ 0.67
Col18a1-202ENSMUST00000081654 Trappc8E9PWG2 1437 aa19.25■□□□□ 0.67
Col18a1-202ENSMUST00000081654 Q3UPC7 1272 aa19.24■□□□□ 0.67
Col18a1-202ENSMUST00000081654 Nop14Q8R3N1 860 aaKnown RBP19.24■□□□□ 0.67
Col18a1-202ENSMUST00000081654 SelenooQ9DBC0 667 aa19.24■□□□□ 0.67
Col18a1-202ENSMUST00000081654 Sycp1Q62209 993 aa19.24■□□□□ 0.67
Col18a1-202ENSMUST00000081654 Fam13aQ8BGI4 693 aa19.24■□□□□ 0.67
Col18a1-202ENSMUST00000081654 Paf1Q8K2T8 535 aa19.24■□□□□ 0.67
Col18a1-202ENSMUST00000081654 Stim1P70302 685 aa19.24■□□□□ 0.67
Col18a1-202ENSMUST00000081654 Ercc6lQ8BHK9 1240 aa19.24■□□□□ 0.67
Col18a1-202ENSMUST00000081654 PxdnQ3UQ28 1475 aa19.24■□□□□ 0.67
Col18a1-202ENSMUST00000081654 Pla2r1Q62028 1487 aa19.24■□□□□ 0.67
Col18a1-202ENSMUST00000081654 Irf9Q61179 399 aa19.23■□□□□ 0.67
Col18a1-202ENSMUST00000081654 Tango6Q8C3S2 1079 aa19.23■□□□□ 0.67
Col18a1-202ENSMUST00000081654 Kif3cO35066 796 aa19.23■□□□□ 0.67
Col18a1-202ENSMUST00000081654 Rufy1Q8BIJ7 712 aa19.23■□□□□ 0.67
Col18a1-202ENSMUST00000081654 Tfip11Q9ERA6 838 aaKnown RBP19.23■□□□□ 0.67
Col18a1-202ENSMUST00000081654 Rbm27Q5SFM8 1060 aaKnown RBP19.23■□□□□ 0.67
Col18a1-202ENSMUST00000081654 Ccdc155Q80VJ8 648 aa19.23■□□□□ 0.67
Col18a1-202ENSMUST00000081654 Bag3Q9JLV1 577 aaKnown RBP19.23■□□□□ 0.67
Col18a1-202ENSMUST00000081654 3425401B19RikD3Z1D3 1412 aa19.23■□□□□ 0.67
Col18a1-202ENSMUST00000081654 Nap1l1P28656 391 aaKnown RBP19.23■□□□□ 0.67
Col18a1-202ENSMUST00000081654 Shroom2A2ALU4 1481 aa19.23■□□□□ 0.67
Col18a1-202ENSMUST00000081654 Smc5Q8CG46 1101 aaKnown RBP19.22■□□□□ 0.67
Col18a1-202ENSMUST00000081654 Smarca5Q91ZW3 1051 aaKnown RBP19.22■□□□□ 0.67
Col18a1-202ENSMUST00000081654 InsrP15208 1372 aa19.22■□□□□ 0.67
Col18a1-202ENSMUST00000081654 Soga3Q6NZL0 945 aa19.22■□□□□ 0.67
Col18a1-202ENSMUST00000081654 Ripk4Q9ERK0 786 aa19.22■□□□□ 0.67
Col18a1-202ENSMUST00000081654 A0A0U1RNP2 1173 aa19.21■□□□□ 0.67
Col18a1-202ENSMUST00000081654 Slc7a3P70423 618 aa19.21■□□□□ 0.67
Col18a1-202ENSMUST00000081654 Lmbr1Q9JIT0 490 aa19.21■□□□□ 0.67
Col18a1-202ENSMUST00000081654 Pik3r4Q8VD65 1358 aa19.21■□□□□ 0.67
Col18a1-202ENSMUST00000081654 Cers3Q1A3B0 383 aa19.21■□□□□ 0.67
Col18a1-202ENSMUST00000081654 Chpf2Q3UU43 768 aa19.21■□□□□ 0.67
Col18a1-202ENSMUST00000081654 Commd10Q8JZY2 202 aa19.21■□□□□ 0.67
Col18a1-202ENSMUST00000081654 Naip7Q9JIB3 1402 aa19.21■□□□□ 0.67
Col18a1-202ENSMUST00000081654 Naip6Q9JIB6 1403 aa19.21■□□□□ 0.67
Col18a1-202ENSMUST00000081654 Tmem94Q7TSH8 1360 aa19.21■□□□□ 0.66
Col18a1-202ENSMUST00000081654 Tmem87bQ8BKU8 555 aa19.2■□□□□ 0.66
Col18a1-202ENSMUST00000081654 Med4Q9CQA5 270 aa19.2■□□□□ 0.66
Col18a1-202ENSMUST00000081654 Znf287Q9EQB9 759 aa19.2■□□□□ 0.66
Col18a1-202ENSMUST00000081654 Gimap5Q8BWF2 308 aa19.2■□□□□ 0.66
Col18a1-202ENSMUST00000081654 Exoc5Q3TPX4 708 aa19.2■□□□□ 0.66
Col18a1-202ENSMUST00000081654 Nup88Q8CEC0 753 aaKnown RBP19.2■□□□□ 0.66
Col18a1-202ENSMUST00000081654 Ttc5Q99LG4 440 aa19.2■□□□□ 0.66
Col18a1-202ENSMUST00000081654 Prex2Q3LAC4 1598 aa19.19■□□□□ 0.66
Col18a1-202ENSMUST00000081654 Ankle2Q6P1H6 964 aa19.19■□□□□ 0.66
Col18a1-202ENSMUST00000081654 Camsap2Q8C1B1 1461 aa19.19■□□□□ 0.66
Col18a1-202ENSMUST00000081654 Dzip1Q8BMD2 852 aa19.19■□□□□ 0.66
Col18a1-202ENSMUST00000081654 Wdr7Q920I9 1489 aa19.19■□□□□ 0.66
Col18a1-202ENSMUST00000081654 Samd9lQ69Z37 1561 aa19.19■□□□□ 0.66
Col18a1-202ENSMUST00000081654 Cfap58B2RW38 873 aa19.19■□□□□ 0.66
Col18a1-202ENSMUST00000081654 Cdkn1cP49919 348 aa19.19■□□□□ 0.66
Col18a1-202ENSMUST00000081654 Mctp1E9PV86 951 aa19.18■□□□□ 0.66
Col18a1-202ENSMUST00000081654 Myd88P22366 296 aa19.18■□□□□ 0.66
Col18a1-202ENSMUST00000081654 Ccdc96Q9CR92 584 aa19.18■□□□□ 0.66
Col18a1-202ENSMUST00000081654 Gnat3Q3V3I2 354 aa19.18■□□□□ 0.66
Col18a1-202ENSMUST00000081654 Mctp2Q5RJH2 878 aa19.18■□□□□ 0.66
Col18a1-202ENSMUST00000081654 Cep89Q9CZX2 791 aa19.18■□□□□ 0.66
Col18a1-202ENSMUST00000081654 Olfml1Q8BSH2 233 aa19.17■□□□□ 0.66
Col18a1-202ENSMUST00000081654 Gjb2Q00977 226 aa19.17■□□□□ 0.66
Col18a1-202ENSMUST00000081654 Mcm10Q0VBD2 885 aa19.17■□□□□ 0.66
Col18a1-202ENSMUST00000081654 Mns1Q61884 491 aa19.17■□□□□ 0.66
Col18a1-202ENSMUST00000081654 Ssh1Q76I79 1042 aa19.17■□□□□ 0.66
Col18a1-202ENSMUST00000081654 Ankrd44B2RXR6 993 aa19.16■□□□□ 0.66
Retrieved 100 of 22,080 RNA–protein pairs in 20.4 ms