RNA–Protein interactions for RNA: ENSMUST00000069168.12

Cpsf6-201, Transcript of Cleavage and polyadenylation specificity factor subunit 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cpsf6, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6-201ENSMUST00000069168 Utp3Q9JI13 469 aaKnown RBP8.29□□□□□ -1.08
Cpsf6-201ENSMUST00000069168 Map7d2A2AG50 781 aa8.29□□□□□ -1.08
Cpsf6-201ENSMUST00000069168 Gm10093D3YYI8 482 aa8.29□□□□□ -1.08
Cpsf6-201ENSMUST00000069168 Hdac1O09106 482 aaKnown RBP8.29□□□□□ -1.08
Cpsf6-201ENSMUST00000069168 Hmox1P14901 289 aa8.29□□□□□ -1.08
Cpsf6-201ENSMUST00000069168 PalmQ9Z0P4 383 aa8.29□□□□□ -1.08
Cpsf6-201ENSMUST00000069168 Znf316Q6PGE4 1016 aa8.29□□□□□ -1.08
Cpsf6-201ENSMUST00000069168 Phactr2B1AVP0 632 aa8.29□□□□□ -1.08
Cpsf6-201ENSMUST00000069168 Brpf1B2RRD7 1212 aa8.29□□□□□ -1.08
Cpsf6-201ENSMUST00000069168 Alpk3Q924C5 1678 aa8.28□□□□□ -1.08
Cpsf6-201ENSMUST00000069168 Rnf20Q5DTM8 973 aa8.28□□□□□ -1.08
Cpsf6-201ENSMUST00000069168 Gsdma3Q5Y4Y6 464 aa8.28□□□□□ -1.08
Cpsf6-201ENSMUST00000069168 PogkQ80TC5 607 aa8.28□□□□□ -1.08
Cpsf6-201ENSMUST00000069168 Fbxo2Q80UW2 297 aa8.28□□□□□ -1.08
Cpsf6-201ENSMUST00000069168 Cdk19Q8BWD8 501 aa8.28□□□□□ -1.08
Cpsf6-201ENSMUST00000069168 Rtn4Q99P72 1162 aaKnown RBP8.28□□□□□ -1.08
Cpsf6-201ENSMUST00000069168 Tceal9Q9DD24 104 aa8.28□□□□□ -1.08
Cpsf6-201ENSMUST00000069168 Kif13aQ9EQW7 1749 aa8.28□□□□□ -1.08
Cpsf6-201ENSMUST00000069168 Gnai2P08752 355 aaKnown RBP8.28□□□□□ -1.08
Cpsf6-201ENSMUST00000069168 LifrP42703 1092 aa8.28□□□□□ -1.08
Cpsf6-201ENSMUST00000069168 Nphp1Q9QY53 687 aa8.28□□□□□ -1.08
Cpsf6-201ENSMUST00000069168 Srek1Q8BZX4 494 aaKnown RBP8.28□□□□□ -1.08
Cpsf6-201ENSMUST00000069168 Pibf1E9Q6K3 756 aa8.27□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Rassf8Q8CJ96 419 aa8.27□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 SrrtQ99MR6 875 aaKnown RBP8.27□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Tfip11Q9ERA6 838 aaKnown RBP8.27□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Ttc21aQ8C0S4 1314 aa8.27□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Taf3Q5HZG4 932 aa8.27□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Wdr63B2RY71 923 aa8.27□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Slc4a10Q5DTL9 1118 aa8.27□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 PhaxQ9JJT9 385 aaKnown RBP8.27□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Nwd1A6H603 1563 aa8.27□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Pik3r4Q8VD65 1358 aa8.27□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Tet3Q8BG87 1668 aa8.27□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Ankrd44B2RXR6 993 aa8.26□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Plekhm2Q80TQ5 1018 aa8.26□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Psma5Q9Z2U1 241 aaKnown RBP8.26□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Tnnt1O88346 262 aa8.26□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Cdkn1cP49919 348 aa8.26□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Med4Q9CQA5 270 aa8.26□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Atp7bQ64446 1462 aa8.26□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Ncapd2Q8K2Z4 1392 aa8.26□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Nop14Q8R3N1 860 aaKnown RBP8.26□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Senp3Q9EP97 568 aaKnown RBP8.26□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Synj2Q9D2G5 1434 aa8.26□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Ankrd50F7BE84 1390 aa8.26□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Brd1E9PZ26 1189 aaKnown RBP8.26□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Gse1Q3U3C9 1213 aa8.26□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 NpatQ8BMA5 1420 aa8.25□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Ap3b2Q9JME5 1082 aa8.25□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Sh3bgrQ9WUZ7 214 aa8.25□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Tbc1d9Q3UYK3 1264 aa8.25□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Pip4k2bQ80XI4 416 aa8.25□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Tubb6Q922F4 447 aa8.25□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 DmtnQ9WV69 405 aa8.25□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Q4VA45 678 aa8.25□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Zranb1Q7M760 708 aa8.25□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 NaspQ99MD9 773 aaKnown RBP8.25□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Naip7Q9JIB3 1402 aa8.25□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Tpd52l1O54818 204 aa8.25□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Prrc2bQ7TPM1 1486 aaKnown RBP8.25□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Ddx19aQ61655 478 aaKnown RBP8.25□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Cabp2Q9JLK4 216 aa8.25□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Dhx8A2A4P0 1244 aaKnown RBP8.24□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Gpatch11Q3UFS4 262 aa8.24□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Cavin2Q63918 418 aaKnown RBP8.24□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Q9D9H8 365 aa8.24□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 AU019823E9PUQ3 292 aa8.24□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 NcapgE9PWG6 1004 aa8.24□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Bag4Q8CI61 457 aa8.24□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Ubxn4Q8VCH8 506 aa8.24□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Aldh8a1Q8BH00 487 aa8.24□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Olfml1Q8BSH2 233 aa8.24□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Rbm10Q99KG3 930 aaKnown RBP8.24□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 CenppQ9CZ92 286 aa8.24□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Ddit3P35639 168 aa8.23□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Q3UPC7 1272 aa8.23□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Noc3lQ8VI84 807 aaKnown RBP8.23□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Spef2Q8C9J3 1734 aa8.23□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Catsper2A2ARP9 588 aa8.23□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Tpm3-rs7D3Z2H9 248 aa8.23□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Rnf214Q8BFU3 668 aaKnown RBP8.23□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Kcnn1Q9EQR3 537 aa8.23□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Ccer1Q9CQL2 403 aa8.23□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Cyb5rlB1AS42 316 aa8.23□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Ecm2Q5FW85 670 aa8.23□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Trim28Q62318 834 aa8.23□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Adamtsl3G3UXC7 1706 aa8.23□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Cc2d1aQ8K1A6 943 aa8.23□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Cabp4Q8VHC5 271 aa8.22□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Hoxb7P09024 217 aa8.22□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Ccdc47Q9D024 483 aaKnown RBP8.22□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Ptpdc1Q6NZK8 747 aa8.22□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Mrps27Q8BK72 415 aaKnown RBP8.22□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Bicd2Q921C5 820 aa8.22□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Rcan3Q9JKK0 239 aa8.21□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Eif3aP23116 1344 aaKnown RBP8.21□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Elp1Q7TT37 1333 aaKnown RBP8.21□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Kdm4cQ8VCD7 1054 aa8.21□□□□□ -1.09
Cpsf6-201ENSMUST00000069168 Plekhg1F6S200 1446 aa8.21□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 28.7 ms