RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Cgnl1Q6AW69 1298 aa19.83■□□□□ 0.77
Ckap4-201ENSMUST00000053871 Nlgn1Q99K10 843 aa19.83■□□□□ 0.76
Ckap4-201ENSMUST00000053871 Astn2Q80Z10 1352 aa19.83■□□□□ 0.76
Ckap4-201ENSMUST00000053871 RictorQ6QI06 1708 aa19.83■□□□□ 0.76
Ckap4-201ENSMUST00000053871 Spef2Q8C9J3 1734 aa19.83■□□□□ 0.76
Ckap4-201ENSMUST00000053871 Mcm4P49717 862 aa19.82■□□□□ 0.76
Ckap4-201ENSMUST00000053871 Q9D2X8 372 aa19.82■□□□□ 0.76
Ckap4-201ENSMUST00000053871 PzpQ61838 1495 aa19.82■□□□□ 0.76
Ckap4-201ENSMUST00000053871 FancaQ9JL70 1439 aa19.81■□□□□ 0.76
Ckap4-201ENSMUST00000053871 Rsph3aQ3UFY4 516 aa19.81■□□□□ 0.76
Ckap4-201ENSMUST00000053871 Ppip5k2Q6ZQB6 1129 aa19.8■□□□□ 0.76
Ckap4-201ENSMUST00000053871 Bcar3Q9QZK2 820 aa19.79■□□□□ 0.76
Ckap4-201ENSMUST00000053871 Gcc1Q9D4H2 778 aa19.79■□□□□ 0.76
Ckap4-201ENSMUST00000053871 Kif1aP33173 1695 aa19.79■□□□□ 0.76
Ckap4-201ENSMUST00000053871 Aldh8a1Q8BH00 487 aa19.79■□□□□ 0.76
Ckap4-201ENSMUST00000053871 Slc35g1Q8BY79 368 aa19.79■□□□□ 0.76
Ckap4-201ENSMUST00000053871 Cyp46a1Q9WVK8 500 aa19.79■□□□□ 0.76
Ckap4-201ENSMUST00000053871 Parp14Q2EMV9 1817 aa19.78■□□□□ 0.76
Ckap4-201ENSMUST00000053871 Tm6sf1P58749 370 aa19.78■□□□□ 0.76
Ckap4-201ENSMUST00000053871 Atg4a-psA0A0G2JFS9 396 aa19.78■□□□□ 0.76
Ckap4-201ENSMUST00000053871 Atg4aQ8C9S8 396 aa19.78■□□□□ 0.76
Ckap4-201ENSMUST00000053871 Pdia3P27773 505 aaKnown RBP19.77■□□□□ 0.76
Ckap4-201ENSMUST00000053871 CenppQ9CZ92 286 aa19.77■□□□□ 0.76
Ckap4-201ENSMUST00000053871 Frmpd2A0A140LI67 1392 aa19.77■□□□□ 0.76
Ckap4-201ENSMUST00000053871 Tmem94Q7TSH8 1360 aa19.77■□□□□ 0.76
Ckap4-201ENSMUST00000053871 Srgap3Q812A2 1099 aa19.77■□□□□ 0.76
Ckap4-201ENSMUST00000053871 Kif20bQ80WE4 1774 aaKnown RBP19.77■□□□□ 0.75
Ckap4-201ENSMUST00000053871 Ppp6r3Q922D4 844 aa19.77■□□□□ 0.75
Ckap4-201ENSMUST00000053871 Aldh1l2Q8K009 923 aa19.76■□□□□ 0.75
Ckap4-201ENSMUST00000053871 Ddit3P35639 168 aa19.75■□□□□ 0.75
Ckap4-201ENSMUST00000053871 Tnrc6bQ8BKI2 1810 aaKnown RBP19.74■□□□□ 0.75
Ckap4-201ENSMUST00000053871 Cps1Q8C196 1500 aa19.74■□□□□ 0.75
Ckap4-201ENSMUST00000053871 Il4rP16382 810 aa19.74■□□□□ 0.75
Ckap4-201ENSMUST00000053871 Chpf2Q3UU43 768 aa19.74■□□□□ 0.75
Ckap4-201ENSMUST00000053871 Prune1Q8BIW1 454 aa19.74■□□□□ 0.75
Ckap4-201ENSMUST00000053871 Ppp1r42Q8R1Z4 357 aa19.74■□□□□ 0.75
Ckap4-201ENSMUST00000053871 Hmox1P14901 289 aa19.73■□□□□ 0.75
Ckap4-201ENSMUST00000053871 Nucb1Q02819 459 aaKnown RBP19.73■□□□□ 0.75
Ckap4-201ENSMUST00000053871 Cwc27Q3TKY6 469 aa19.73■□□□□ 0.75
Ckap4-201ENSMUST00000053871 SlkO54988 1233 aa19.72■□□□□ 0.75
Ckap4-201ENSMUST00000053871 Gnai2P08752 355 aaKnown RBP19.72■□□□□ 0.75
Ckap4-201ENSMUST00000053871 4930407I10RikD3Z5T8 1512 aa19.72■□□□□ 0.75
Ckap4-201ENSMUST00000053871 Casq1O09165 405 aa19.72■□□□□ 0.75
Ckap4-201ENSMUST00000053871 Hoxc9P09633 260 aa19.72■□□□□ 0.75
Ckap4-201ENSMUST00000053871 Hsp90b1P08113 802 aaKnown RBP19.72■□□□□ 0.75
Ckap4-201ENSMUST00000053871 Amotl2Q8K371 772 aa19.72■□□□□ 0.75
Ckap4-201ENSMUST00000053871 Mdc1Q5PSV9 1707 aa19.71■□□□□ 0.75
Ckap4-201ENSMUST00000053871 Sirt1Q923E4 737 aa19.71■□□□□ 0.75
Ckap4-201ENSMUST00000053871 Mcm2P97310 904 aa19.71■□□□□ 0.75
Ckap4-201ENSMUST00000053871 HypkQ9CR41 129 aa19.71■□□□□ 0.75
Ckap4-201ENSMUST00000053871 Bcl2l13P59017 434 aa19.7■□□□□ 0.74
Ckap4-201ENSMUST00000053871 1700010I14RikQ7TPG0 532 aa19.7■□□□□ 0.74
Ckap4-201ENSMUST00000053871 Nphp1Q9QY53 687 aa19.7■□□□□ 0.74
Ckap4-201ENSMUST00000053871 Anapc15-psA0A140T8L6 141 aa19.7■□□□□ 0.74
Ckap4-201ENSMUST00000053871 Bloc1s4Q8VED2 215 aa19.7■□□□□ 0.74
Ckap4-201ENSMUST00000053871 Cyp2d12Q8BVD2 504 aa19.69■□□□□ 0.74
Ckap4-201ENSMUST00000053871 EngaseQ8BX80 734 aa19.69■□□□□ 0.74
Ckap4-201ENSMUST00000053871 Cdk12Q14AX6 1484 aaKnown RBP19.68■□□□□ 0.74
Ckap4-201ENSMUST00000053871 Znf335A2A5K6 1337 aa19.68■□□□□ 0.74
Ckap4-201ENSMUST00000053871 Slit3Q9WVB4 1523 aa19.68■□□□□ 0.74
Ckap4-201ENSMUST00000053871 Rreb1Q3UH06 1700 aaKnown RBP19.68■□□□□ 0.74
Ckap4-201ENSMUST00000053871 Kdm4cQ8VCD7 1054 aa19.67■□□□□ 0.74
Ckap4-201ENSMUST00000053871 CemipQ8BI06 1361 aa19.67■□□□□ 0.74
Ckap4-201ENSMUST00000053871 Tshz3Q8CGV9 1081 aa19.67■□□□□ 0.74
Ckap4-201ENSMUST00000053871 Phactr2B1AVP0 632 aa19.66■□□□□ 0.74
Ckap4-201ENSMUST00000053871 Map3k13Q1HKZ5 959 aa19.66■□□□□ 0.74
Ckap4-201ENSMUST00000053871 Fkbp4P30416 458 aa19.65■□□□□ 0.74
Ckap4-201ENSMUST00000053871 Slc4a10Q5DTL9 1118 aa19.65■□□□□ 0.74
Ckap4-201ENSMUST00000053871 Ptpdc1Q6NZK8 747 aa19.65■□□□□ 0.74
Ckap4-201ENSMUST00000053871 Erc2Q6PH08 957 aa19.65■□□□□ 0.74
Ckap4-201ENSMUST00000053871 Phf23Q8BSN5 401 aa19.65■□□□□ 0.74
Ckap4-201ENSMUST00000053871 TatQ8QZR1 454 aa19.65■□□□□ 0.74
Ckap4-201ENSMUST00000053871 Foxp4Q9DBY0 795 aaKnown RBP19.64■□□□□ 0.73
Ckap4-201ENSMUST00000053871 Abcc10Q8R4P9 1501 aa19.64■□□□□ 0.73
Ckap4-201ENSMUST00000053871 Zfp777B9EKF4 885 aa19.64■□□□□ 0.73
Ckap4-201ENSMUST00000053871 RestQ8VIG1 1082 aa19.64■□□□□ 0.73
Ckap4-201ENSMUST00000053871 Exoc6bA6H5Z3 810 aa19.63■□□□□ 0.73
Ckap4-201ENSMUST00000053871 Rasa1E9PYG6 1038 aa19.63■□□□□ 0.73
Ckap4-201ENSMUST00000053871 Bag4Q8CI61 457 aa19.63■□□□□ 0.73
Ckap4-201ENSMUST00000053871 Chd2E9PZM4 1827 aaKnown RBP19.63■□□□□ 0.73
Ckap4-201ENSMUST00000053871 AU015836B2RUM3 263 aa19.62■□□□□ 0.73
Ckap4-201ENSMUST00000053871 Zkscan2G3X952 960 aa19.62■□□□□ 0.73
Ckap4-201ENSMUST00000053871 Gdpd2Q9ESM6 539 aa19.62■□□□□ 0.73
Ckap4-201ENSMUST00000053871 Camta1A2A891 1682 aa19.62■□□□□ 0.73
Ckap4-201ENSMUST00000053871 Fyb1O35601 819 aa19.61■□□□□ 0.73
Ckap4-201ENSMUST00000053871 Cyp27a1Q9DBG1 533 aa19.61■□□□□ 0.73
Ckap4-201ENSMUST00000053871 Disp3A3KFU9 1347 aa19.61■□□□□ 0.73
Ckap4-201ENSMUST00000053871 Zkscan16A2ALW2 728 aa19.61■□□□□ 0.73
Ckap4-201ENSMUST00000053871 Arhgef1Q61210 920 aaKnown RBP19.6■□□□□ 0.73
Ckap4-201ENSMUST00000053871 Stk3Q9JI10 497 aa19.6■□□□□ 0.73
Ckap4-201ENSMUST00000053871 Med1Q925J9 1575 aa19.6■□□□□ 0.73
Ckap4-201ENSMUST00000053871 Ncapd2Q8K2Z4 1392 aa19.6■□□□□ 0.73
Ckap4-201ENSMUST00000053871 Mmp8O70138 465 aa19.6■□□□□ 0.73
Ckap4-201ENSMUST00000053871 Zap70P43404 618 aa19.6■□□□□ 0.73
Ckap4-201ENSMUST00000053871 Pik3c2aQ61194 1686 aa19.59■□□□□ 0.73
Ckap4-201ENSMUST00000053871 Cfdp1O88271 295 aaKnown RBP19.59■□□□□ 0.73
Ckap4-201ENSMUST00000053871 Cyp2d11P24457 504 aa19.59■□□□□ 0.73
Ckap4-201ENSMUST00000053871 Zkscan1Q8BGS3 561 aaKnown RBP19.59■□□□□ 0.73
Ckap4-201ENSMUST00000053871 Atp8b2P98199 1209 aa19.59■□□□□ 0.73
Ckap4-201ENSMUST00000053871 N4bp2F8VQG7 1678 aaKnown RBP19.58■□□□□ 0.73
Retrieved 100 of 22,080 RNA–protein pairs in 22.9 ms