RNA–Protein interactions for RNA: ENSMUST00000047349.7

Usp28-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Usp28, Length 4,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28-201ENSMUST00000047349 Nek4Q9Z1J2 792 aa11.53□□□□□ -0.56
Usp28-201ENSMUST00000047349 D430041D05RikF6ZGR6 1678 aa11.53□□□□□ -0.56
Usp28-201ENSMUST00000047349 Igsf1Q7TQA1 1317 aa11.53□□□□□ -0.56
Usp28-201ENSMUST00000047349 1700010I14RikQ7TPG0 532 aa11.53□□□□□ -0.56
Usp28-201ENSMUST00000047349 Ccdc146E9Q9F7 977 aa11.52□□□□□ -0.56
Usp28-201ENSMUST00000047349 Q3TQI7 289 aaKnown RBP11.52□□□□□ -0.56
Usp28-201ENSMUST00000047349 Tbc1d9Q3UYK3 1264 aa11.52□□□□□ -0.56
Usp28-201ENSMUST00000047349 CenppQ9CZ92 286 aa11.52□□□□□ -0.56
Usp28-201ENSMUST00000047349 Gm10563F6WIE4 79 aa11.52□□□□□ -0.57
Usp28-201ENSMUST00000047349 Nlgn1Q99K10 843 aa11.52□□□□□ -0.57
Usp28-201ENSMUST00000047349 FancaQ9JL70 1439 aa11.51□□□□□ -0.57
Usp28-201ENSMUST00000047349 Ggnbp2Q5SV77 696 aa11.51□□□□□ -0.57
Usp28-201ENSMUST00000047349 Fam13aQ8BGI4 693 aa11.51□□□□□ -0.57
Usp28-201ENSMUST00000047349 Pik3c2aQ61194 1686 aa11.51□□□□□ -0.57
Usp28-201ENSMUST00000047349 C5P06684 1680 aa11.5□□□□□ -0.57
Usp28-201ENSMUST00000047349 Prkar2bP31324 416 aa11.5□□□□□ -0.57
Usp28-201ENSMUST00000047349 Idi1P58044 227 aa11.5□□□□□ -0.57
Usp28-201ENSMUST00000047349 Eya1P97767 591 aa11.5□□□□□ -0.57
Usp28-201ENSMUST00000047349 Kif2cQ922S8 721 aa11.5□□□□□ -0.57
Usp28-201ENSMUST00000047349 Ubr1O70481 1757 aa11.5□□□□□ -0.57
Usp28-201ENSMUST00000047349 Scn7aB1AYL1 1681 aa11.5□□□□□ -0.57
Usp28-201ENSMUST00000047349 Catsper2A2ARP9 588 aa11.5□□□□□ -0.57
Usp28-201ENSMUST00000047349 Pibf1E9Q6K3 756 aa11.5□□□□□ -0.57
Usp28-201ENSMUST00000047349 Als2Q920R0 1651 aa11.49□□□□□ -0.57
Usp28-201ENSMUST00000047349 Gnai2P08752 355 aaKnown RBP11.49□□□□□ -0.57
Usp28-201ENSMUST00000047349 Ano8Q6PB70 1060 aa11.49□□□□□ -0.57
Usp28-201ENSMUST00000047349 GorabQ8BRM2 368 aa11.49□□□□□ -0.57
Usp28-201ENSMUST00000047349 Gimap6Q8K349 305 aa11.49□□□□□ -0.57
Usp28-201ENSMUST00000047349 Kdm4cQ8VCD7 1054 aa11.49□□□□□ -0.57
Usp28-201ENSMUST00000047349 Cyp46a1Q9WVK8 500 aa11.49□□□□□ -0.57
Usp28-201ENSMUST00000047349 Adgrb1Q3UHD1 1582 aa11.48□□□□□ -0.57
Usp28-201ENSMUST00000047349 Trpm3Q5F4S9 1721 aa11.48□□□□□ -0.57
Usp28-201ENSMUST00000047349 Gtf3c3Q3TMP1 882 aa11.48□□□□□ -0.57
Usp28-201ENSMUST00000047349 Bcl9Q9D219 1425 aa11.48□□□□□ -0.57
Usp28-201ENSMUST00000047349 Hoxc9P09633 260 aa11.48□□□□□ -0.57
Usp28-201ENSMUST00000047349 Ccne1Q61457 408 aa11.47□□□□□ -0.57
Usp28-201ENSMUST00000047349 Antxr1Q9CZ52 562 aa11.47□□□□□ -0.57
Usp28-201ENSMUST00000047349 PtmsQ9D0J8 101 aaKnown RBP11.47□□□□□ -0.57
Usp28-201ENSMUST00000047349 Map2P20357 1828 aa11.47□□□□□ -0.57
Usp28-201ENSMUST00000047349 Plcb2A3KGF7 1181 aa11.47□□□□□ -0.57
Usp28-201ENSMUST00000047349 FanclQ9CR14 375 aa11.47□□□□□ -0.57
Usp28-201ENSMUST00000047349 Parp14Q2EMV9 1817 aa11.46□□□□□ -0.57
Usp28-201ENSMUST00000047349 Aifm3Q3TY86 605 aa11.46□□□□□ -0.57
Usp28-201ENSMUST00000047349 Ppip5k2Q6ZQB6 1129 aa11.46□□□□□ -0.57
Usp28-201ENSMUST00000047349 Casq1O09165 405 aa11.46□□□□□ -0.57
Usp28-201ENSMUST00000047349 Foxp4Q9DBY0 795 aaKnown RBP11.46□□□□□ -0.57
Usp28-201ENSMUST00000047349 Aplp1Q03157 653 aa11.46□□□□□ -0.58
Usp28-201ENSMUST00000047349 Isy1Q69ZQ2 285 aaKnown RBP11.46□□□□□ -0.58
Usp28-201ENSMUST00000047349 Tfip11Q9ERA6 838 aaKnown RBP11.46□□□□□ -0.58
Usp28-201ENSMUST00000047349 Zkscan2G3X952 960 aa11.45□□□□□ -0.58
Usp28-201ENSMUST00000047349 Phf23Q8BSN5 401 aa11.45□□□□□ -0.58
Usp28-201ENSMUST00000047349 Nphp1Q9QY53 687 aa11.45□□□□□ -0.58
Usp28-201ENSMUST00000047349 Elp1Q7TT37 1333 aaKnown RBP11.45□□□□□ -0.58
Usp28-201ENSMUST00000047349 Prim1P20664 417 aa11.45□□□□□ -0.58
Usp28-201ENSMUST00000047349 Rfx1P48377 963 aa11.45□□□□□ -0.58
Usp28-201ENSMUST00000047349 Dnajc5gQ8C632 165 aa11.45□□□□□ -0.58
Usp28-201ENSMUST00000047349 Tmem94Q7TSH8 1360 aa11.45□□□□□ -0.58
Usp28-201ENSMUST00000047349 Kdm6aO70546 1401 aa11.44□□□□□ -0.58
Usp28-201ENSMUST00000047349 Nucb1Q02819 459 aaKnown RBP11.44□□□□□ -0.58
Usp28-201ENSMUST00000047349 Kcnh5Q920E3 988 aa11.44□□□□□ -0.58
Usp28-201ENSMUST00000047349 Stk36Q69ZM6 1316 aa11.44□□□□□ -0.58
Usp28-201ENSMUST00000047349 Camta1A2A891 1682 aa11.44□□□□□ -0.58
Usp28-201ENSMUST00000047349 MccE9PWI3 1003 aa11.44□□□□□ -0.58
Usp28-201ENSMUST00000047349 Ssh1Q76I79 1042 aa11.44□□□□□ -0.58
Usp28-201ENSMUST00000047349 Amotl1Q9D4H4 968 aa11.44□□□□□ -0.58
Usp28-201ENSMUST00000047349 TatQ8QZR1 454 aa11.44□□□□□ -0.58
Usp28-201ENSMUST00000047349 Pdia3P27773 505 aaKnown RBP11.43□□□□□ -0.58
Usp28-201ENSMUST00000047349 Erc2Q6PH08 957 aa11.43□□□□□ -0.58
Usp28-201ENSMUST00000047349 Fyb1O35601 819 aa11.43□□□□□ -0.58
Usp28-201ENSMUST00000047349 Larp1bA0A0A6YXJ7 370 aaKnown RBP11.43□□□□□ -0.58
Usp28-201ENSMUST00000047349 Atf5O70191 283 aa11.43□□□□□ -0.58
Usp28-201ENSMUST00000047349 MyclP10166 368 aa11.43□□□□□ -0.58
Usp28-201ENSMUST00000047349 Ncoa4Q5U4H9 625 aa11.43□□□□□ -0.58
Usp28-201ENSMUST00000047349 Ppp6r3Q922D4 844 aa11.43□□□□□ -0.58
Usp28-201ENSMUST00000047349 Msh6P54276 1358 aaKnown RBP11.42□□□□□ -0.58
Usp28-201ENSMUST00000047349 Nckap5lQ6GQX2 1323 aa11.42□□□□□ -0.58
Usp28-201ENSMUST00000047349 Mcm4P49717 862 aa11.42□□□□□ -0.58
Usp28-201ENSMUST00000047349 Srgap3Q812A2 1099 aa11.42□□□□□ -0.58
Usp28-201ENSMUST00000047349 Rimbp3Q3V0F0 1606 aa11.42□□□□□ -0.58
Usp28-201ENSMUST00000047349 Noc3lQ8VI84 807 aaKnown RBP11.42□□□□□ -0.58
Usp28-201ENSMUST00000047349 Smarca5Q91ZW3 1051 aaKnown RBP11.42□□□□□ -0.58
Usp28-201ENSMUST00000047349 Q9D2X8 372 aa11.42□□□□□ -0.58
Usp28-201ENSMUST00000047349 Fam83gQ5SWY7 812 aa11.41□□□□□ -0.58
Usp28-201ENSMUST00000047349 Atg4a-psA0A0G2JFS9 396 aa11.41□□□□□ -0.58
Usp28-201ENSMUST00000047349 Fmnl2A2APV2 1086 aa11.41□□□□□ -0.58
Usp28-201ENSMUST00000047349 Atp8b2P98199 1209 aa11.41□□□□□ -0.58
Usp28-201ENSMUST00000047349 Atg4aQ8C9S8 396 aa11.41□□□□□ -0.58
Usp28-201ENSMUST00000047349 Tet3Q8BG87 1668 aa11.41□□□□□ -0.58
Usp28-201ENSMUST00000047349 Ppp1r42Q8R1Z4 357 aa11.41□□□□□ -0.58
Usp28-201ENSMUST00000047349 TimelessQ9R1X4 1197 aa11.41□□□□□ -0.58
Usp28-201ENSMUST00000047349 Abcc12Q80WJ6 1366 aa11.41□□□□□ -0.58
Usp28-201ENSMUST00000047349 PtprvP70289 1705 aa11.4□□□□□ -0.58
Usp28-201ENSMUST00000047349 Chpf2Q3UU43 768 aa11.4□□□□□ -0.58
Usp28-201ENSMUST00000047349 Cnksr1A2A9K7 700 aa11.4□□□□□ -0.59
Usp28-201ENSMUST00000047349 Zkscan1Q8BGS3 561 aaKnown RBP11.4□□□□□ -0.59
Usp28-201ENSMUST00000047349 Mrps27Q8BK72 415 aaKnown RBP11.4□□□□□ -0.59
Usp28-201ENSMUST00000047349 Tmem2Q5FWI3 1383 aa11.4□□□□□ -0.59
Usp28-201ENSMUST00000047349 Mmp8O70138 465 aa11.39□□□□□ -0.59
Usp28-201ENSMUST00000047349 Arfgef2A2A5R2 1792 aa11.39□□□□□ -0.59
Usp28-201ENSMUST00000047349 Dnttip2Q8R2M2 758 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms