RNA–Protein interactions for RNA: ENSMUST00000038188.13

Limch1-201, Transcript of LIM and calponin homology domains-containing protein 1, mousemouse

TSL 1 (best) BASIC

Gene Limch1, Length 5,903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1-201ENSMUST00000038188 Rbm17Q8JZX4 405 aaKnown RBP12.85□□□□□ -0.35
Limch1-201ENSMUST00000038188 Pcmtd1P59913 357 aa12.85□□□□□ -0.35
Limch1-201ENSMUST00000038188 Brinp3Q499E0 766 aa12.85□□□□□ -0.35
Limch1-201ENSMUST00000038188 Plcd4Q8K3R3 807 aa12.85□□□□□ -0.35
Limch1-201ENSMUST00000038188 Sel1lQ9Z2G6 790 aa12.85□□□□□ -0.35
Limch1-201ENSMUST00000038188 Abca16E9PWJ7 1678 aa12.85□□□□□ -0.35
Limch1-201ENSMUST00000038188 TbcaP48428 108 aaKnown RBP12.85□□□□□ -0.35
Limch1-201ENSMUST00000038188 Ddx58Q6Q899 926 aa12.85□□□□□ -0.35
Limch1-201ENSMUST00000038188 Unc13aQ4KUS2 1712 aa12.85□□□□□ -0.35
Limch1-201ENSMUST00000038188 Olfr247E9PVJ7 320 aa12.84□□□□□ -0.35
Limch1-201ENSMUST00000038188 Cald1E9QA15 768 aaKnown RBP12.84□□□□□ -0.35
Limch1-201ENSMUST00000038188 Olfr819K7N727 320 aa12.84□□□□□ -0.35
Limch1-201ENSMUST00000038188 Akap2O54931 893 aa12.84□□□□□ -0.35
Limch1-201ENSMUST00000038188 Asxl1P59598 1514 aa12.84□□□□□ -0.35
Limch1-201ENSMUST00000038188 Gnai2P08752 355 aaKnown RBP12.84□□□□□ -0.35
Limch1-201ENSMUST00000038188 Gm1043A0A140LJC2 1431 aa12.84□□□□□ -0.35
Limch1-201ENSMUST00000038188 Pprc1Q6NZN1 1644 aa12.84□□□□□ -0.35
Limch1-201ENSMUST00000038188 Abca5Q8K448 1642 aa12.84□□□□□ -0.35
Limch1-201ENSMUST00000038188 Card10P58660 1021 aa12.84□□□□□ -0.35
Limch1-201ENSMUST00000038188 Sde2Q8K1J5 448 aaKnown RBP12.84□□□□□ -0.35
Limch1-201ENSMUST00000038188 Ppp4r3bQ922R5 820 aa12.84□□□□□ -0.35
Limch1-201ENSMUST00000038188 Efcab6Q6P1E8 1516 aa12.84□□□□□ -0.35
Limch1-201ENSMUST00000038188 Rbm28Q8CGC6 750 aaKnown RBP12.84□□□□□ -0.35
Limch1-201ENSMUST00000038188 Nup133Q8R0G9 1155 aa12.84□□□□□ -0.35
Limch1-201ENSMUST00000038188 Ccdc43Q9CR29 222 aaKnown RBP12.83□□□□□ -0.35
Limch1-201ENSMUST00000038188 FosbP13346 338 aa12.83□□□□□ -0.36
Limch1-201ENSMUST00000038188 Ccer1Q9CQL2 403 aa12.83□□□□□ -0.36
Limch1-201ENSMUST00000038188 Rprd2Q6NXI6 1469 aaKnown RBP12.83□□□□□ -0.36
Limch1-201ENSMUST00000038188 RarsQ9D0I9 660 aaKnown RBP12.83□□□□□ -0.36
Limch1-201ENSMUST00000038188 Irf9Q61179 399 aa12.83□□□□□ -0.36
Limch1-201ENSMUST00000038188 Ccdc96Q9CR92 584 aa12.83□□□□□ -0.36
Limch1-201ENSMUST00000038188 Smarce1O54941 411 aaKnown RBP12.83□□□□□ -0.36
Limch1-201ENSMUST00000038188 Cwc27Q3TKY6 469 aa12.83□□□□□ -0.36
Limch1-201ENSMUST00000038188 Rbm27Q5SFM8 1060 aaKnown RBP12.83□□□□□ -0.36
Limch1-201ENSMUST00000038188 Phf23Q8BSN5 401 aa12.83□□□□□ -0.36
Limch1-201ENSMUST00000038188 ParvgQ9ERD8 331 aa12.83□□□□□ -0.36
Limch1-201ENSMUST00000038188 Sh3tc1G3X9F6 1346 aa12.82□□□□□ -0.36
Limch1-201ENSMUST00000038188 Rnf17Q99MV7 1640 aa12.82□□□□□ -0.36
Limch1-201ENSMUST00000038188 Ncf1Q09014 390 aa12.82□□□□□ -0.36
Limch1-201ENSMUST00000038188 BccipQ9CWI3 316 aa12.82□□□□□ -0.36
Limch1-201ENSMUST00000038188 Kdm6bQ5NCY0 1641 aa12.82□□□□□ -0.36
Limch1-201ENSMUST00000038188 Ccdc171E9Q1U1 1324 aa12.82□□□□□ -0.36
Limch1-201ENSMUST00000038188 Arhgef11Q68FM7 1552 aa12.82□□□□□ -0.36
Limch1-201ENSMUST00000038188 Cwc25Q9DBF7 416 aa12.81□□□□□ -0.36
Limch1-201ENSMUST00000038188 Chpf2Q3UU43 768 aa12.81□□□□□ -0.36
Limch1-201ENSMUST00000038188 Prdm11A2AGX3 565 aa12.81□□□□□ -0.36
Limch1-201ENSMUST00000038188 Hoxc9P09633 260 aa12.81□□□□□ -0.36
Limch1-201ENSMUST00000038188 Atp6v1aP50516 617 aaKnown RBP12.81□□□□□ -0.36
Limch1-201ENSMUST00000038188 Prkg1P0C605 671 aa12.81□□□□□ -0.36
Limch1-201ENSMUST00000038188 Rnf20Q5DTM8 973 aa12.81□□□□□ -0.36
Limch1-201ENSMUST00000038188 Evc2Q8K1G2 1220 aa12.81□□□□□ -0.36
Limch1-201ENSMUST00000038188 PrxO55103 1391 aa12.81□□□□□ -0.36
Limch1-201ENSMUST00000038188 Prr29B1ARI9 187 aa12.81□□□□□ -0.36
Limch1-201ENSMUST00000038188 Ces1aE9PYP1 563 aa12.81□□□□□ -0.36
Limch1-201ENSMUST00000038188 Cyp2c67Q569X9 491 aa12.81□□□□□ -0.36
Limch1-201ENSMUST00000038188 Ankle2Q6P1H6 964 aa12.8□□□□□ -0.36
Limch1-201ENSMUST00000038188 Ppp6r1Q7TSI3 856 aa12.8□□□□□ -0.36
Limch1-201ENSMUST00000038188 Ankrd23Q812A3 306 aa12.8□□□□□ -0.36
Limch1-201ENSMUST00000038188 Dbndd1Q9CZ00 160 aa12.8□□□□□ -0.36
Limch1-201ENSMUST00000038188 Tns3Q5SSZ5 1440 aa12.8□□□□□ -0.36
Limch1-201ENSMUST00000038188 Rnaseh2aQ9CWY8 301 aa12.8□□□□□ -0.36
Limch1-201ENSMUST00000038188 Nckap5lQ6GQX2 1323 aa12.8□□□□□ -0.36
Limch1-201ENSMUST00000038188 Glt1d1A4FUP9 346 aa12.8□□□□□ -0.36
Limch1-201ENSMUST00000038188 Vps37dQ810I0 261 aa12.8□□□□□ -0.36
Limch1-201ENSMUST00000038188 Slc7a3P70423 618 aa12.8□□□□□ -0.36
Limch1-201ENSMUST00000038188 Ppp1r21Q3TDD9 780 aa12.8□□□□□ -0.36
Limch1-201ENSMUST00000038188 Riok1Q922Q2 567 aa12.8□□□□□ -0.36
Limch1-201ENSMUST00000038188 GalcP54818 684 aa12.79□□□□□ -0.36
Limch1-201ENSMUST00000038188 Esco1Q69Z69 843 aa12.79□□□□□ -0.36
Limch1-201ENSMUST00000038188 Fmn2Q9JL04 1578 aa12.79□□□□□ -0.36
Limch1-201ENSMUST00000038188 Ca8P28651 291 aa12.79□□□□□ -0.36
Limch1-201ENSMUST00000038188 Adgrb2Q8CGM1 1561 aa12.79□□□□□ -0.36
Limch1-201ENSMUST00000038188 Tmc1Q8R4P5 757 aa12.79□□□□□ -0.36
Limch1-201ENSMUST00000038188 Arhgef40Q3UPH7 1517 aa12.79□□□□□ -0.36
Limch1-201ENSMUST00000038188 Map3k2Q61083 619 aa12.78□□□□□ -0.36
Limch1-201ENSMUST00000038188 Lrrcc1Q69ZB0 1026 aa12.78□□□□□ -0.36
Limch1-201ENSMUST00000038188 Dok7Q18PE0 504 aa12.78□□□□□ -0.36
Limch1-201ENSMUST00000038188 Astn2Q80Z10 1352 aa12.78□□□□□ -0.36
Limch1-201ENSMUST00000038188 Cplx1P63040 134 aa12.78□□□□□ -0.36
Limch1-201ENSMUST00000038188 Lrrc7Q80TE7 1490 aa12.78□□□□□ -0.36
Limch1-201ENSMUST00000038188 Magea1O89006 320 aa12.77□□□□□ -0.36
Limch1-201ENSMUST00000038188 Magea5O89009 320 aa12.77□□□□□ -0.36
Limch1-201ENSMUST00000038188 Pank1Q8K4K6 548 aa12.77□□□□□ -0.36
Limch1-201ENSMUST00000038188 Magea2Q9R2A2 320 aa12.77□□□□□ -0.36
Limch1-201ENSMUST00000038188 Cyp46a1Q9WVK8 500 aa12.77□□□□□ -0.36
Limch1-201ENSMUST00000038188 Adamts12Q811B3 1600 aa12.77□□□□□ -0.36
Limch1-201ENSMUST00000038188 Epb41l3Q9WV92 929 aa12.77□□□□□ -0.36
Limch1-201ENSMUST00000038188 Ltv1Q6NSQ7 470 aaKnown RBP12.77□□□□□ -0.37
Limch1-201ENSMUST00000038188 Dnajc5gQ8C632 165 aa12.77□□□□□ -0.37
Limch1-201ENSMUST00000038188 Cd248Q91V98 765 aa12.77□□□□□ -0.37
Limch1-201ENSMUST00000038188 Cers3Q1A3B0 383 aa12.77□□□□□ -0.37
Limch1-201ENSMUST00000038188 Prkag2Q91WG5 566 aa12.77□□□□□ -0.37
Limch1-201ENSMUST00000038188 Pdcd6ipQ9WU78 869 aaKnown RBP12.77□□□□□ -0.37
Limch1-201ENSMUST00000038188 Tbc1d8Q9Z1A9 1134 aa12.77□□□□□ -0.37
Limch1-201ENSMUST00000038188 Galntl5Q9D4M9 431 aa12.77□□□□□ -0.37
Limch1-201ENSMUST00000038188 Cdhr2E9Q7P9 1308 aa12.76□□□□□ -0.37
Limch1-201ENSMUST00000038188 Odf2lQ9D478 642 aa12.76□□□□□ -0.37
Limch1-201ENSMUST00000038188 Ybx3Q9JKB3 361 aaKnown RBP12.76□□□□□ -0.37
Limch1-201ENSMUST00000038188 Nphp1Q9QY53 687 aa12.76□□□□□ -0.37
Limch1-201ENSMUST00000038188 MeiocA2AG06 965 aa12.76□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 42.9 ms