RNA–Protein interactions for RNA: ENSMUST00000031971.12

Ssbp1-201, Transcript of Single-stranded DNA-binding protein, mitochondrial, mousemouse

TSL 1 (best) BASIC

Gene Ssbp1, Length 1,063 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp1-201ENSMUST00000031971 Gemin5Q8BX17 1502 aaKnown RBP11.17□□□□□ -0.62
Ssbp1-201ENSMUST00000031971 Rims2Q9EQZ7 1530 aa11.17□□□□□ -0.62
Ssbp1-201ENSMUST00000031971 Acin1Q9JIX8 1338 aaKnown RBP11.16□□□□□ -0.62
Ssbp1-201ENSMUST00000031971 Pip4k2bQ80XI4 416 aa11.16□□□□□ -0.62
Ssbp1-201ENSMUST00000031971 Rims1Q99NE5 1463 aa11.16□□□□□ -0.62
Ssbp1-201ENSMUST00000031971 Myo3aQ8K3H5 1613 aa11.16□□□□□ -0.62
Ssbp1-201ENSMUST00000031971 Txndc2Q6P902 515 aa11.15□□□□□ -0.62
Ssbp1-201ENSMUST00000031971 Fcf1Q9CTH6 198 aa11.15□□□□□ -0.62
Ssbp1-201ENSMUST00000031971 PplQ9R269 1755 aa11.15□□□□□ -0.62
Ssbp1-201ENSMUST00000031971 Arid4bA2CG63 1314 aaKnown RBP11.14□□□□□ -0.63
Ssbp1-201ENSMUST00000031971 Setd1aE9PYH6 1716 aa11.13□□□□□ -0.63
Ssbp1-201ENSMUST00000031971 Plxnc1Q9QZC2 1574 aa11.13□□□□□ -0.63
Ssbp1-201ENSMUST00000031971 Mroh3A0A1D5RM54 893 aa11.13□□□□□ -0.63
Ssbp1-201ENSMUST00000031971 Rapgefl1Q68EF8 662 aa11.13□□□□□ -0.63
Ssbp1-201ENSMUST00000031971 Thap11Q9JJD0 305 aa11.13□□□□□ -0.63
Ssbp1-201ENSMUST00000031971 Arhgef28P97433 1693 aa11.13□□□□□ -0.63
Ssbp1-201ENSMUST00000031971 Bcl2l13P59017 434 aa11.12□□□□□ -0.63
Ssbp1-201ENSMUST00000031971 Slc30a10Q3UVU3 470 aa11.12□□□□□ -0.63
Ssbp1-201ENSMUST00000031971 Zfp943Q6NZP4 507 aa11.12□□□□□ -0.63
Ssbp1-201ENSMUST00000031971 Slit3Q9WVB4 1523 aa11.12□□□□□ -0.63
Ssbp1-201ENSMUST00000031971 Zc3h13E9Q784 1729 aaKnown RBP11.12□□□□□ -0.63
Ssbp1-201ENSMUST00000031971 Iqgap1Q9JKF1 1657 aaKnown RBP11.11□□□□□ -0.63
Ssbp1-201ENSMUST00000031971 Cdk13Q69ZA1 1511 aaKnown RBP11.11□□□□□ -0.63
Ssbp1-201ENSMUST00000031971 Kiaa0391Q8JZY4 584 aaKnown RBP11.11□□□□□ -0.63
Ssbp1-201ENSMUST00000031971 Hhipl2Q9D2G9 717 aa11.11□□□□□ -0.63
Ssbp1-201ENSMUST00000031971 Tpcn1Q9EQJ0 817 aa11.11□□□□□ -0.63
Ssbp1-201ENSMUST00000031971 Mbd5B1AYB6 1498 aa11.11□□□□□ -0.63
Ssbp1-201ENSMUST00000031971 Ifit1bl1D3Z6F0 470 aa11.1□□□□□ -0.63
Ssbp1-201ENSMUST00000031971 Tor1aip2Q8BYU6 502 aa11.1□□□□□ -0.63
Ssbp1-201ENSMUST00000031971 Med1Q925J9 1575 aa11.1□□□□□ -0.63
Ssbp1-201ENSMUST00000031971 Tubgcp6G5E8P0 1769 aa11.09□□□□□ -0.63
Ssbp1-201ENSMUST00000031971 Nrxn3Q6P9K9 1571 aa11.09□□□□□ -0.63
Ssbp1-201ENSMUST00000031971 Gmpr2Q99L27 348 aa11.09□□□□□ -0.63
Ssbp1-201ENSMUST00000031971 Q9D9H8 365 aa11.09□□□□□ -0.63
Ssbp1-201ENSMUST00000031971 Thsd7aQ69ZU6 1645 aa11.09□□□□□ -0.63
Ssbp1-201ENSMUST00000031971 PalldQ9ET54 1408 aa11.09□□□□□ -0.63
Ssbp1-201ENSMUST00000031971 Gli3Q61602 1583 aa11.08□□□□□ -0.64
Ssbp1-201ENSMUST00000031971 Mug2P28666 1451 aa11.08□□□□□ -0.64
Ssbp1-201ENSMUST00000031971 AvpP35455 168 aa11.08□□□□□ -0.64
Ssbp1-201ENSMUST00000031971 Rapgef3Q8VCC8 918 aa11.08□□□□□ -0.64
Ssbp1-201ENSMUST00000031971 Ubap1lG3UW59 384 aa11.07□□□□□ -0.64
Ssbp1-201ENSMUST00000031971 Foxj1Q61660 421 aa11.07□□□□□ -0.64
Ssbp1-201ENSMUST00000031971 Shq1Q7TMX5 569 aa11.07□□□□□ -0.64
Ssbp1-201ENSMUST00000031971 Lmtk3Q5XJV6 1424 aa11.07□□□□□ -0.64
Ssbp1-201ENSMUST00000031971 MaddQ80U28 1577 aa11.07□□□□□ -0.64
Ssbp1-201ENSMUST00000031971 Uri1Q3TLD5 531 aa11.06□□□□□ -0.64
Ssbp1-201ENSMUST00000031971 Amigo3Q8C2S7 508 aa11.06□□□□□ -0.64
Ssbp1-201ENSMUST00000031971 Gpr37Q9QY42 600 aa11.06□□□□□ -0.64
Ssbp1-201ENSMUST00000031971 Gm7138L7N2C3 230 aa11.05□□□□□ -0.64
Ssbp1-201ENSMUST00000031971 Gm3238W4VSP7 230 aa11.05□□□□□ -0.64
Ssbp1-201ENSMUST00000031971 Cdk5rap2Q8K389 1822 aa11.05□□□□□ -0.64
Ssbp1-201ENSMUST00000031971 Polr3aB2RXC6 1390 aa11.04□□□□□ -0.64
Ssbp1-201ENSMUST00000031971 Cep170bQ80U49 1574 aa11.04□□□□□ -0.64
Ssbp1-201ENSMUST00000031971 Cpsf1Q9EPU4 1441 aaKnown RBP11.04□□□□□ -0.64
Ssbp1-201ENSMUST00000031971 Phox2bO35690 314 aa11.04□□□□□ -0.64
Ssbp1-201ENSMUST00000031971 Atp1b4Q99ME6 356 aa11.04□□□□□ -0.64
Ssbp1-201ENSMUST00000031971 Map2k5Q9WVS7 448 aa11.04□□□□□ -0.64
Ssbp1-201ENSMUST00000031971 Cep152A2AUM9 1736 aaKnown RBP11.04□□□□□ -0.64
Ssbp1-201ENSMUST00000031971 Fan1Q69ZT1 1020 aa11.03□□□□□ -0.64
Ssbp1-201ENSMUST00000031971 PzpQ61838 1495 aa11.03□□□□□ -0.64
Ssbp1-201ENSMUST00000031971 Lrrc7Q80TE7 1490 aa11.03□□□□□ -0.64
Ssbp1-201ENSMUST00000031971 NefmP08553 848 aa11.02□□□□□ -0.65
Ssbp1-201ENSMUST00000031971 Puf60Q3UEB3 564 aaKnown RBP11.02□□□□□ -0.65
Ssbp1-201ENSMUST00000031971 Pcdhb22Q91XZ8 794 aa11.02□□□□□ -0.65
Ssbp1-201ENSMUST00000031971 Arap3Q8R5G7 1538 aa11.02□□□□□ -0.65
Ssbp1-201ENSMUST00000031971 Mink1Q9JM52 1308 aa11.02□□□□□ -0.65
Ssbp1-201ENSMUST00000031971 RalgapbQ8BQZ4 1484 aa11.01□□□□□ -0.65
Ssbp1-201ENSMUST00000031971 TonslQ6NZL6 1363 aa11.01□□□□□ -0.65
Ssbp1-201ENSMUST00000031971 Stk26Q99JT2 416 aa11□□□□□ -0.65
Ssbp1-201ENSMUST00000031971 Nxf1Q99JX7 618 aaKnown RBP11□□□□□ -0.65
Ssbp1-201ENSMUST00000031971 Sipa1l1Q8C0T5 1782 aa10.99□□□□□ -0.65
Ssbp1-201ENSMUST00000031971 FcrlaQ920A9 352 aa10.99□□□□□ -0.65
Ssbp1-201ENSMUST00000031971 HnrnpmQ9D0E1 729 aaKnown RBP10.99□□□□□ -0.65
Ssbp1-201ENSMUST00000031971 Slc52a2Q9D8F3 450 aa10.99□□□□□ -0.65
Ssbp1-201ENSMUST00000031971 Cps1Q8C196 1500 aa10.99□□□□□ -0.65
Ssbp1-201ENSMUST00000031971 Gm20521D3Z5F7 333 aa10.98□□□□□ -0.65
Ssbp1-201ENSMUST00000031971 Srpk2O54781 681 aaKnown RBP10.98□□□□□ -0.65
Ssbp1-201ENSMUST00000031971 Gm17324Q8C6J8 137 aa10.98□□□□□ -0.65
Ssbp1-201ENSMUST00000031971 Usp32F8VPZ3 1604 aa10.98□□□□□ -0.65
Ssbp1-201ENSMUST00000031971 Col18a1P39061 1774 aa10.98□□□□□ -0.65
Ssbp1-201ENSMUST00000031971 Wnt7aP24383 349 aa10.97□□□□□ -0.65
Ssbp1-201ENSMUST00000031971 Zbtb38Q3LR78 1197 aa10.97□□□□□ -0.65
Ssbp1-201ENSMUST00000031971 Pik3r4Q8VD65 1358 aa10.97□□□□□ -0.65
Ssbp1-201ENSMUST00000031971 Tns3Q5SSZ5 1440 aa10.97□□□□□ -0.65
Ssbp1-201ENSMUST00000031971 Dapk1Q80YE7 1442 aa10.97□□□□□ -0.65
Ssbp1-201ENSMUST00000031971 Ift172Q6VH22 1749 aa10.97□□□□□ -0.65
Ssbp1-201ENSMUST00000031971 Hoxb3P09026 433 aa10.96□□□□□ -0.65
Ssbp1-201ENSMUST00000031971 OatP29758 439 aa10.96□□□□□ -0.65
Ssbp1-201ENSMUST00000031971 Taok2Q6ZQ29 1240 aa10.96□□□□□ -0.65
Ssbp1-201ENSMUST00000031971 Lrp8Q924X6 996 aa10.96□□□□□ -0.65
Ssbp1-201ENSMUST00000031971 DnmbpQ6TXD4 1580 aa10.95□□□□□ -0.66
Ssbp1-201ENSMUST00000031971 Rundc1Q0VDN7 615 aa10.95□□□□□ -0.66
Ssbp1-201ENSMUST00000031971 Utp14aQ640M1 767 aaKnown RBP10.95□□□□□ -0.66
Ssbp1-201ENSMUST00000031971 Os9Q8K2C7 672 aa10.95□□□□□ -0.66
Ssbp1-201ENSMUST00000031971 Tmem94Q7TSH8 1360 aa10.94□□□□□ -0.66
Ssbp1-201ENSMUST00000031971 Aldh1a1P24549 501 aa10.94□□□□□ -0.66
Ssbp1-201ENSMUST00000031971 Hoxa10P31310 416 aa10.94□□□□□ -0.66
Ssbp1-201ENSMUST00000031971 Zbtb4Q5F293 982 aa10.94□□□□□ -0.66
Ssbp1-201ENSMUST00000031971 Usp40Q8BWR4 1235 aa10.94□□□□□ -0.66
Ssbp1-201ENSMUST00000031971 Adam33Q923W9 797 aa10.94□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 18.7 ms