RNA–Protein interactions for RNA: ENSMUST00000022328.13

Ldb3-202, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 2,468 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-202ENSMUST00000022328 Idi1P58044 227 aa13.74□□□□□ -0.21
Ldb3-202ENSMUST00000022328 Dnttip2Q8R2M2 758 aaKnown RBP13.74□□□□□ -0.21
Ldb3-202ENSMUST00000022328 Klhdc4Q921I2 584 aa13.74□□□□□ -0.21
Ldb3-202ENSMUST00000022328 Slit2Q9R1B9 1521 aa13.74□□□□□ -0.21
Ldb3-202ENSMUST00000022328 Kif20bQ80WE4 1774 aaKnown RBP13.74□□□□□ -0.21
Ldb3-202ENSMUST00000022328 Bcl9Q9D219 1425 aa13.73□□□□□ -0.21
Ldb3-202ENSMUST00000022328 TmpoQ61033 693 aaKnown RBP13.73□□□□□ -0.21
Ldb3-202ENSMUST00000022328 Dennd6aQ8BH65 605 aa13.72□□□□□ -0.21
Ldb3-202ENSMUST00000022328 Camta1A2A891 1682 aa13.72□□□□□ -0.21
Ldb3-202ENSMUST00000022328 Tet3Q8BG87 1668 aa13.72□□□□□ -0.21
Ldb3-202ENSMUST00000022328 Adgrb1Q3UHD1 1582 aa13.72□□□□□ -0.21
Ldb3-202ENSMUST00000022328 LifrP42703 1092 aa13.72□□□□□ -0.21
Ldb3-202ENSMUST00000022328 Cetn4Q8K4K1 168 aa13.72□□□□□ -0.21
Ldb3-202ENSMUST00000022328 KnstrnQ9D9Z1 312 aaKnown RBP13.72□□□□□ -0.21
Ldb3-202ENSMUST00000022328 Scn7aB1AYL1 1681 aa13.72□□□□□ -0.21
Ldb3-202ENSMUST00000022328 Chl1P70232 1209 aa13.71□□□□□ -0.21
Ldb3-202ENSMUST00000022328 Rad17Q6NXW6 688 aa13.71□□□□□ -0.21
Ldb3-202ENSMUST00000022328 Ric3Q8BPM6 367 aa13.71□□□□□ -0.21
Ldb3-202ENSMUST00000022328 Nlgn1Q99K10 843 aa13.71□□□□□ -0.21
Ldb3-202ENSMUST00000022328 Map2P20357 1828 aa13.71□□□□□ -0.21
Ldb3-202ENSMUST00000022328 Gm10563F6WIE4 79 aa13.71□□□□□ -0.21
Ldb3-202ENSMUST00000022328 Aldh1l2Q8K009 923 aa13.71□□□□□ -0.21
Ldb3-202ENSMUST00000022328 4930407I10RikD3Z5T8 1512 aa13.7□□□□□ -0.22
Ldb3-202ENSMUST00000022328 Kif24Q6NWW5 1356 aa13.7□□□□□ -0.22
Ldb3-202ENSMUST00000022328 FancaQ9JL70 1439 aa13.7□□□□□ -0.22
Ldb3-202ENSMUST00000022328 MpndQ3TV65 487 aa13.7□□□□□ -0.22
Ldb3-202ENSMUST00000022328 Cog6Q8R3I3 657 aa13.7□□□□□ -0.22
Ldb3-202ENSMUST00000022328 Mfap1aC0HKD8 439 aaKnown RBP13.69□□□□□ -0.22
Ldb3-202ENSMUST00000022328 Mfap1bC0HKD9 439 aaKnown RBP13.69□□□□□ -0.22
Ldb3-202ENSMUST00000022328 Tnpo1Q8BFY9 898 aaKnown RBP13.69□□□□□ -0.22
Ldb3-202ENSMUST00000022328 Ap3b2Q9JME5 1082 aa13.69□□□□□ -0.22
Ldb3-202ENSMUST00000022328 Frmpd2A0A140LI67 1392 aa13.69□□□□□ -0.22
Ldb3-202ENSMUST00000022328 Scaf1Q5U4C3 1256 aaKnown RBP13.69□□□□□ -0.22
Ldb3-202ENSMUST00000022328 Trim27Q62158 513 aa13.69□□□□□ -0.22
Ldb3-202ENSMUST00000022328 Ppp1r37Q8BKR5 712 aa13.69□□□□□ -0.22
Ldb3-202ENSMUST00000022328 GphnQ8BUV3 769 aaKnown RBP13.69□□□□□ -0.22
Ldb3-202ENSMUST00000022328 Eya1P97767 591 aa13.68□□□□□ -0.22
Ldb3-202ENSMUST00000022328 Ppp6r1Q7TSI3 856 aa13.68□□□□□ -0.22
Ldb3-202ENSMUST00000022328 Cabp4Q8VHC5 271 aa13.68□□□□□ -0.22
Ldb3-202ENSMUST00000022328 Ptpn23Q6PB44 1692 aa13.68□□□□□ -0.22
Ldb3-202ENSMUST00000022328 Rab11fip3Q8CHD8 1047 aa13.68□□□□□ -0.22
Ldb3-202ENSMUST00000022328 Parp14Q2EMV9 1817 aa13.67□□□□□ -0.22
Ldb3-202ENSMUST00000022328 Gm21190A0A0G2JGJ6 266 aa13.67□□□□□ -0.22
Ldb3-202ENSMUST00000022328 HnrnpuQ8VEK3 800 aaKnown RBP13.67□□□□□ -0.22
Ldb3-202ENSMUST00000022328 Kif2cQ922S8 721 aa13.67□□□□□ -0.22
Ldb3-202ENSMUST00000022328 CarsQ9ER72 831 aaKnown RBP13.67□□□□□ -0.22
Ldb3-202ENSMUST00000022328 Nckap5lQ6GQX2 1323 aa13.67□□□□□ -0.22
Ldb3-202ENSMUST00000022328 Trpm3Q5F4S9 1721 aa13.67□□□□□ -0.22
Ldb3-202ENSMUST00000022328 Wdr63B2RY71 923 aa13.66□□□□□ -0.22
Ldb3-202ENSMUST00000022328 PtprvP70289 1705 aa13.66□□□□□ -0.22
Ldb3-202ENSMUST00000022328 Rtf1A2AQ19 715 aaKnown RBP13.66□□□□□ -0.22
Ldb3-202ENSMUST00000022328 Cgnl1Q6AW69 1298 aa13.66□□□□□ -0.22
Ldb3-202ENSMUST00000022328 Tm6sf1P58749 370 aa13.65□□□□□ -0.22
Ldb3-202ENSMUST00000022328 Aifm3Q3TY86 605 aa13.65□□□□□ -0.22
Ldb3-202ENSMUST00000022328 Ggnbp2Q5SV77 696 aa13.65□□□□□ -0.22
Ldb3-202ENSMUST00000022328 Aldh8a1Q8BH00 487 aa13.65□□□□□ -0.22
Ldb3-202ENSMUST00000022328 Tmem94Q7TSH8 1360 aa13.65□□□□□ -0.22
Ldb3-202ENSMUST00000022328 Ano8Q6PB70 1060 aa13.65□□□□□ -0.22
Ldb3-202ENSMUST00000022328 Igsf1Q7TQA1 1317 aa13.64□□□□□ -0.23
Ldb3-202ENSMUST00000022328 1700019A02RikA0A087WPV9 146 aa13.64□□□□□ -0.23
Ldb3-202ENSMUST00000022328 ArxO35085 564 aa13.64□□□□□ -0.23
Ldb3-202ENSMUST00000022328 Hoxc9P09633 260 aa13.64□□□□□ -0.23
Ldb3-202ENSMUST00000022328 Aplp1Q03157 653 aa13.64□□□□□ -0.23
Ldb3-202ENSMUST00000022328 Prim1P20664 417 aa13.64□□□□□ -0.23
Ldb3-202ENSMUST00000022328 Antxr1Q9CZ52 562 aa13.64□□□□□ -0.23
Ldb3-202ENSMUST00000022328 Ccne1Q61457 408 aa13.63□□□□□ -0.23
Ldb3-202ENSMUST00000022328 Eif4g2Q62448 906 aaKnown RBP13.63□□□□□ -0.23
Ldb3-202ENSMUST00000022328 Spryd3E9Q9B3 442 aa13.63□□□□□ -0.23
Ldb3-202ENSMUST00000022328 Paxip1Q6NZQ4 1056 aa13.62□□□□□ -0.23
Ldb3-202ENSMUST00000022328 Gcc1Q9D4H2 778 aa13.62□□□□□ -0.23
Ldb3-202ENSMUST00000022328 C3P01027 1663 aa13.61□□□□□ -0.23
Ldb3-202ENSMUST00000022328 Msh6P54276 1358 aaKnown RBP13.61□□□□□ -0.23
Ldb3-202ENSMUST00000022328 Triml2E9PW10 424 aa13.61□□□□□ -0.23
Ldb3-202ENSMUST00000022328 Pibf1E9Q6K3 756 aa13.61□□□□□ -0.23
Ldb3-202ENSMUST00000022328 Snap23O09044 210 aa13.61□□□□□ -0.23
Ldb3-202ENSMUST00000022328 Gm10093D3YYI8 482 aa13.61□□□□□ -0.23
Ldb3-202ENSMUST00000022328 Hdac1O09106 482 aaKnown RBP13.61□□□□□ -0.23
Ldb3-202ENSMUST00000022328 Mcm2P97310 904 aa13.61□□□□□ -0.23
Ldb3-202ENSMUST00000022328 Fam13aQ8BGI4 693 aa13.61□□□□□ -0.23
Ldb3-202ENSMUST00000022328 Slc35g1Q8BY79 368 aa13.61□□□□□ -0.23
Ldb3-202ENSMUST00000022328 HypkQ9CR41 129 aa13.61□□□□□ -0.23
Ldb3-202ENSMUST00000022328 Foxp4Q9DBY0 795 aaKnown RBP13.61□□□□□ -0.23
Ldb3-202ENSMUST00000022328 Tbc1d9Q3UYK3 1264 aa13.6□□□□□ -0.23
Ldb3-202ENSMUST00000022328 Sv2bQ8BG39 683 aa13.6□□□□□ -0.23
Ldb3-202ENSMUST00000022328 Prkar2bP31324 416 aa13.59□□□□□ -0.23
Ldb3-202ENSMUST00000022328 Ncapd2Q8K2Z4 1392 aa13.59□□□□□ -0.23
Ldb3-202ENSMUST00000022328 Terf2O35144 541 aa13.58□□□□□ -0.23
Ldb3-202ENSMUST00000022328 Zbtb7aO88939 569 aaKnown RBP13.58□□□□□ -0.23
Ldb3-202ENSMUST00000022328 FanclQ9CR14 375 aa13.58□□□□□ -0.23
Ldb3-202ENSMUST00000022328 Tmem2Q5FWI3 1383 aa13.58□□□□□ -0.24
Ldb3-202ENSMUST00000022328 CenppQ9CZ92 286 aa13.58□□□□□ -0.24
Ldb3-202ENSMUST00000022328 Nek4Q9Z1J2 792 aa13.58□□□□□ -0.24
Ldb3-202ENSMUST00000022328 Rimbp3Q3V0F0 1606 aa13.58□□□□□ -0.24
Ldb3-202ENSMUST00000022328 Larp1bA0A0A6YXJ7 370 aaKnown RBP13.57□□□□□ -0.24
Ldb3-202ENSMUST00000022328 Mcm4P49717 862 aa13.57□□□□□ -0.24
Ldb3-202ENSMUST00000022328 Ncoa4Q5U4H9 625 aa13.57□□□□□ -0.24
Ldb3-202ENSMUST00000022328 Rrp12Q6P5B0 1295 aaKnown RBP13.57□□□□□ -0.24
Ldb3-202ENSMUST00000022328 Npm3Q9CPP0 175 aaKnown RBP13.57□□□□□ -0.24
Ldb3-202ENSMUST00000022328 Ahnak2E9PYB0 1738 aaKnown RBP13.57□□□□□ -0.24
Ldb3-202ENSMUST00000022328 Tns3Q5SSZ5 1440 aa13.57□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms