RNA–Protein interactions for RNA: ENSMUST00000016399.5

Tubb1-201, Transcript of Tubulin beta-1 chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tubb1, Length 1,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1-201ENSMUST00000016399 Ubr1O70481 1757 aa14.65□□□□□ -0.06
Tubb1-201ENSMUST00000016399 Fam50bQ9WTJ8 334 aa14.65□□□□□ -0.06
Tubb1-201ENSMUST00000016399 Jdp2P97875 163 aa14.64□□□□□ -0.07
Tubb1-201ENSMUST00000016399 Pcgf6Q99NA9 353 aa14.64□□□□□ -0.07
Tubb1-201ENSMUST00000016399 Gm21680A0A0G2JGR8 267 aa14.63□□□□□ -0.07
Tubb1-201ENSMUST00000016399 Gm10471E9Q1C7 252 aa14.63□□□□□ -0.07
Tubb1-201ENSMUST00000016399 Hoxd11P23813 323 aa14.63□□□□□ -0.07
Tubb1-201ENSMUST00000016399 Trim28Q62318 834 aa14.63□□□□□ -0.07
Tubb1-201ENSMUST00000016399 ErfeQ6PGN1 340 aa14.63□□□□□ -0.07
Tubb1-201ENSMUST00000016399 Kiaa0319lQ8K135 1048 aa14.63□□□□□ -0.07
Tubb1-201ENSMUST00000016399 Mrps5Q99N87 432 aaKnown RBP14.63□□□□□ -0.07
Tubb1-201ENSMUST00000016399 Scn7aB1AYL1 1681 aa14.62□□□□□ -0.07
Tubb1-201ENSMUST00000016399 Supt5hO55201 1082 aaKnown RBP14.6□□□□□ -0.07
Tubb1-201ENSMUST00000016399 TkfcQ8VC30 578 aa14.6□□□□□ -0.07
Tubb1-201ENSMUST00000016399 Rnaseh2aQ9CWY8 301 aa14.6□□□□□ -0.07
Tubb1-201ENSMUST00000016399 Rps6ka4Q9Z2B9 773 aa14.6□□□□□ -0.07
Tubb1-201ENSMUST00000016399 Col15a1O35206 1367 aa14.59□□□□□ -0.07
Tubb1-201ENSMUST00000016399 MeiocA2AG06 965 aa14.59□□□□□ -0.07
Tubb1-201ENSMUST00000016399 Hoxc9P09633 260 aa14.59□□□□□ -0.07
Tubb1-201ENSMUST00000016399 Ppp1r15aP17564 657 aa14.59□□□□□ -0.07
Tubb1-201ENSMUST00000016399 Klc3Q91W40 508 aa14.59□□□□□ -0.07
Tubb1-201ENSMUST00000016399 Col23a1Q8K4G2 532 aa14.58□□□□□ -0.07
Tubb1-201ENSMUST00000016399 Znrd1-asQ8R0E5 213 aa14.58□□□□□ -0.07
Tubb1-201ENSMUST00000016399 Speer4bQ9D9F7 267 aa14.58□□□□□ -0.07
Tubb1-201ENSMUST00000016399 Map2P20357 1828 aa14.58□□□□□ -0.07
Tubb1-201ENSMUST00000016399 Hmgb2P30681 210 aaKnown RBP14.58□□□□□ -0.08
Tubb1-201ENSMUST00000016399 Igsf1Q7TQA1 1317 aa14.57□□□□□ -0.08
Tubb1-201ENSMUST00000016399 Bicdl1A0JNT9 577 aa14.57□□□□□ -0.08
Tubb1-201ENSMUST00000016399 Wwc2Q6NXJ0 1187 aa14.57□□□□□ -0.08
Tubb1-201ENSMUST00000016399 Exoc6Q8R313 802 aa14.57□□□□□ -0.08
Tubb1-201ENSMUST00000016399 P2rx7Q9Z1M0 595 aa14.57□□□□□ -0.08
Tubb1-201ENSMUST00000016399 PnisrA2AJT4 805 aaKnown RBP14.56□□□□□ -0.08
Tubb1-201ENSMUST00000016399 Aplp2Q06335 707 aa14.56□□□□□ -0.08
Tubb1-201ENSMUST00000016399 Adgre1Q61549 931 aa14.56□□□□□ -0.08
Tubb1-201ENSMUST00000016399 Nlrp6Q91WS2 869 aa14.56□□□□□ -0.08
Tubb1-201ENSMUST00000016399 Prom2Q3UUY6 835 aa14.55□□□□□ -0.08
Tubb1-201ENSMUST00000016399 Rpgrip1lQ8CG73 1264 aa14.55□□□□□ -0.08
Tubb1-201ENSMUST00000016399 Zfp777B9EKF4 885 aa14.54□□□□□ -0.08
Tubb1-201ENSMUST00000016399 ApobrQ8VBT6 942 aa14.54□□□□□ -0.08
Tubb1-201ENSMUST00000016399 Q7TT23 1179 aa14.53□□□□□ -0.08
Tubb1-201ENSMUST00000016399 Rsph6aQ8CDR2 708 aa14.53□□□□□ -0.08
Tubb1-201ENSMUST00000016399 Zswim8Q3UHH1 1832 aaKnown RBP14.53□□□□□ -0.08
Tubb1-201ENSMUST00000016399 Arfgef2A2A5R2 1792 aa14.53□□□□□ -0.08
Tubb1-201ENSMUST00000016399 Atf7ipQ7TT18 1306 aa14.52□□□□□ -0.08
Tubb1-201ENSMUST00000016399 Eif4a2P10630 407 aa14.52□□□□□ -0.08
Tubb1-201ENSMUST00000016399 ArsiQ32KI9 573 aa14.52□□□□□ -0.08
Tubb1-201ENSMUST00000016399 Ccne1Q61457 408 aa14.52□□□□□ -0.08
Tubb1-201ENSMUST00000016399 Podxl2Q8CAE9 603 aa14.52□□□□□ -0.08
Tubb1-201ENSMUST00000016399 Spon1Q8VCC9 807 aa14.52□□□□□ -0.08
Tubb1-201ENSMUST00000016399 Slc12a5Q91V14 1138 aa14.52□□□□□ -0.08
Tubb1-201ENSMUST00000016399 Cyp2c69E9PXC3 491 aa14.51□□□□□ -0.09
Tubb1-201ENSMUST00000016399 Cyp2c40P56657 491 aa14.51□□□□□ -0.09
Tubb1-201ENSMUST00000016399 NppbP40753 121 aa14.5□□□□□ -0.09
Tubb1-201ENSMUST00000016399 Larp1Q6ZQ58 1072 aaKnown RBP14.5□□□□□ -0.09
Tubb1-201ENSMUST00000016399 GsdmaQ9EST1 446 aa14.5□□□□□ -0.09
Tubb1-201ENSMUST00000016399 Ahnak2E9PYB0 1738 aaKnown RBP14.5□□□□□ -0.09
Tubb1-201ENSMUST00000016399 FocadA2AKG8 1798 aa14.5□□□□□ -0.09
Tubb1-201ENSMUST00000016399 Sumf1Q8R0F3 372 aa14.49□□□□□ -0.09
Tubb1-201ENSMUST00000016399 Tsen2Q6P7W5 460 aa14.49□□□□□ -0.09
Tubb1-201ENSMUST00000016399 Eya1P97767 591 aa14.48□□□□□ -0.09
Tubb1-201ENSMUST00000016399 Ccnl1Q52KE7 532 aaKnown RBP14.48□□□□□ -0.09
Tubb1-201ENSMUST00000016399 Mrs2Q5NCE8 434 aa14.48□□□□□ -0.09
Tubb1-201ENSMUST00000016399 Kdm6aO70546 1401 aa14.47□□□□□ -0.09
Tubb1-201ENSMUST00000016399 Kiaa1107Q80TK0 1369 aa14.47□□□□□ -0.09
Tubb1-201ENSMUST00000016399 Akap2O54931 893 aa14.47□□□□□ -0.09
Tubb1-201ENSMUST00000016399 Zscan21Q07231 555 aa14.47□□□□□ -0.09
Tubb1-201ENSMUST00000016399 4930572O03RikQ8C5Y0 211 aa14.47□□□□□ -0.09
Tubb1-201ENSMUST00000016399 SnrkQ8VDU5 748 aa14.47□□□□□ -0.09
Tubb1-201ENSMUST00000016399 Camkk2Q8C078 588 aa14.46□□□□□ -0.09
Tubb1-201ENSMUST00000016399 Adgrb1Q3UHD1 1582 aa14.46□□□□□ -0.1
Tubb1-201ENSMUST00000016399 Abca3Q8R420 1704 aa14.45□□□□□ -0.1
Tubb1-201ENSMUST00000016399 PalmQ9Z0P4 383 aa14.45□□□□□ -0.1
Tubb1-201ENSMUST00000016399 Cyp2c67Q569X9 491 aa14.44□□□□□ -0.1
Tubb1-201ENSMUST00000016399 U2af1Q9D883 239 aaKnown RBP14.44□□□□□ -0.1
Tubb1-201ENSMUST00000016399 Simc1E9Q6E9 1354 aa14.44□□□□□ -0.1
Tubb1-201ENSMUST00000016399 MpripP97434 1024 aa14.43□□□□□ -0.1
Tubb1-201ENSMUST00000016399 ThemisQ8BGW0 636 aa14.43□□□□□ -0.1
Tubb1-201ENSMUST00000016399 FktnQ8R507 461 aa14.43□□□□□ -0.1
Tubb1-201ENSMUST00000016399 Taf1dQ9D4V4 322 aa14.43□□□□□ -0.1
Tubb1-201ENSMUST00000016399 Shank3Q4ACU6 1730 aa14.43□□□□□ -0.1
Tubb1-201ENSMUST00000016399 Sned1Q70E20 1403 aa14.43□□□□□ -0.1
Tubb1-201ENSMUST00000016399 Gtpbp6Q3U6U5 514 aa14.42□□□□□ -0.1
Tubb1-201ENSMUST00000016399 Slc4a2P13808 1237 aaKnown RBP14.41□□□□□ -0.1
Tubb1-201ENSMUST00000016399 Ppp1r37Q8BKR5 712 aa14.41□□□□□ -0.1
Tubb1-201ENSMUST00000016399 Parp14Q2EMV9 1817 aa14.41□□□□□ -0.1
Tubb1-201ENSMUST00000016399 Gm21663A0A0G2JE01 267 aa14.41□□□□□ -0.1
Tubb1-201ENSMUST00000016399 Gm7361D3Z6R1 267 aa14.41□□□□□ -0.1
Tubb1-201ENSMUST00000016399 5031410I06RikE9Q4E0 267 aa14.41□□□□□ -0.1
Tubb1-201ENSMUST00000016399 Gm1979E9QAN3 267 aa14.41□□□□□ -0.1
Tubb1-201ENSMUST00000016399 Gm5862K7N5V5 267 aa14.41□□□□□ -0.1
Tubb1-201ENSMUST00000016399 Gm10220K7N660 267 aa14.41□□□□□ -0.1
Tubb1-201ENSMUST00000016399 Tgfb2P27090 414 aa14.41□□□□□ -0.1
Tubb1-201ENSMUST00000016399 Gsdma3Q5Y4Y6 464 aa14.41□□□□□ -0.1
Tubb1-201ENSMUST00000016399 TrhQ62361 256 aa14.41□□□□□ -0.1
Tubb1-201ENSMUST00000016399 VwdeQ6DFV8 926 aa14.41□□□□□ -0.1
Tubb1-201ENSMUST00000016399 NrdcQ8BHG1 1161 aa14.41□□□□□ -0.1
Tubb1-201ENSMUST00000016399 Rab11fip3Q8CHD8 1047 aa14.41□□□□□ -0.1
Tubb1-201ENSMUST00000016399 Gm13023A2A8N2 498 aa14.4□□□□□ -0.1
Tubb1-201ENSMUST00000016399 Cyp2c68K7N6C2 491 aa14.4□□□□□ -0.1
Tubb1-201ENSMUST00000016399 Smarcc1P97496 1104 aa14.4□□□□□ -0.1
Retrieved 100 of 22,080 RNA–protein pairs in 86.9 ms