RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeastyeast

Gene TGA1, Length 73 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TGA1tA(UGC)A PHO88P38264 188 aaPredicted RBP9.54□□□□□ -0.88
TGA1tA(UGC)A GPB2P39717 880 aa9.54□□□□□ -0.88
TGA1tA(UGC)A PSF2P40359 213 aa9.54□□□□□ -0.88
TGA1tA(UGC)A ATG1P53104 897 aa9.54□□□□□ -0.88
TGA1tA(UGC)A ULP1Q02724 621 aa9.54□□□□□ -0.88
TGA1tA(UGC)A MYO5Q04439 1219 aaKnown RBP9.54□□□□□ -0.88
TGA1tA(UGC)A SPN1Q06505 410 aaPredicted RBP9.54□□□□□ -0.88
TGA1tA(UGC)A SRS2P12954 1174 aa9.53□□□□□ -0.88
TGA1tA(UGC)A MAC1P35192 417 aa9.53□□□□□ -0.88
TGA1tA(UGC)A UBP9P39967 754 aa9.53□□□□□ -0.88
TGA1tA(UGC)A ALD6P54115 500 aaKnown RBP9.53□□□□□ -0.88
TGA1tA(UGC)A GCR2Q01722 534 aa9.53□□□□□ -0.88
TGA1tA(UGC)A ICL2Q12031 575 aa9.53□□□□□ -0.88
TGA1tA(UGC)A RAD18P10862 487 aa9.52□□□□□ -0.89
TGA1tA(UGC)A VMA2P16140 517 aaKnown RBP9.52□□□□□ -0.89
TGA1tA(UGC)A SRP54P20424 541 aaKnown RBP9.52□□□□□ -0.89
TGA1tA(UGC)A TGL1P34163 548 aa9.52□□□□□ -0.89
TGA1tA(UGC)A RER2P35196 286 aa9.52□□□□□ -0.89
TGA1tA(UGC)A MXR1P40029 184 aa9.52□□□□□ -0.89
TGA1tA(UGC)A HXT17P53631 564 aa9.52□□□□□ -0.89
TGA1tA(UGC)A FOL1P53848 824 aa9.52□□□□□ -0.89
TGA1tA(UGC)A NUC1P08466 329 aa9.51□□□□□ -0.89
TGA1tA(UGC)A ACE2P21192 770 aa9.51□□□□□ -0.89
TGA1tA(UGC)A PAH1P32567 862 aa9.51□□□□□ -0.89
TGA1tA(UGC)A UTR4P32626 227 aa9.51□□□□□ -0.89
TGA1tA(UGC)A CSM2P40465 213 aa9.51□□□□□ -0.89
TGA1tA(UGC)A ECM23Q02710 187 aa9.51□□□□□ -0.89
TGA1tA(UGC)A VPS30Q02948 557 aa9.51□□□□□ -0.89
TGA1tA(UGC)A TMA64Q04600 565 aaKnown RBP9.51□□□□□ -0.89
TGA1tA(UGC)A FPR4Q06205 392 aaPredicted RBP9.51□□□□□ -0.89
TGA1tA(UGC)A MAK31P23059 88 aa9.5□□□□□ -0.89
TGA1tA(UGC)A RPT6Q01939 405 aaKnown RBP9.5□□□□□ -0.89
TGA1tA(UGC)A DUS4Q06063 367 aa9.5□□□□□ -0.89
TGA1tA(UGC)A TFC6Q06339 672 aa9.5□□□□□ -0.89
TGA1tA(UGC)A PRE10P21242 288 aaKnown RBP RIP-Chip data9.49□□□□□ -0.89not detected
TGA1tA(UGC)A PEP3P27801 918 aa9.49□□□□□ -0.89
TGA1tA(UGC)A CIC1P38779 376 aaKnown RBP9.49□□□□□ -0.89
TGA1tA(UGC)A HXT13P39924 564 aa9.49□□□□□ -0.89
TGA1tA(UGC)A YGR125WP53273 1036 aa9.49□□□□□ -0.89
TGA1tA(UGC)A YPR117WQ06116 2489 aa9.48□□□□□ -0.89
TGA1tA(UGC)A AIM21P40563 679 aa9.48□□□□□ -0.89
TGA1tA(UGC)A VPS62P53285 467 aa9.48□□□□□ -0.89
TGA1tA(UGC)A SPH1Q06160 661 aa9.48□□□□□ -0.89
TGA1tA(UGC)A SUE1Q06524 206 aa9.48□□□□□ -0.89
TGA1tA(UGC)A CLF1Q12309 687 aaPredicted RBP9.48□□□□□ -0.89
TGA1tA(UGC)A PGA3Q12746 312 aaKnown RBP9.48□□□□□ -0.89
TGA1tA(UGC)A SAM1P10659 382 aaKnown RBP9.47□□□□□ -0.89
TGA1tA(UGC)A RPL8BP29453 256 aaKnown RBP9.47□□□□□ -0.89
TGA1tA(UGC)A RGT1P32862 1170 aa9.47□□□□□ -0.89
TGA1tA(UGC)A AFG3P39925 761 aa9.47□□□□□ -0.89
TGA1tA(UGC)A AIM9P40053 627 aaKnown RBP9.47□□□□□ -0.89
TGA1tA(UGC)A CSC1Q06538 782 aa9.47□□□□□ -0.89
TGA1tA(UGC)A IMP2'P32351 346 aa9.46□□□□□ -0.9
TGA1tA(UGC)A DLD1P32891 587 aa9.46□□□□□ -0.9
TGA1tA(UGC)A YKR018CP36114 725 aa9.46□□□□□ -0.9
TGA1tA(UGC)A VPS29P38759 282 aa9.46□□□□□ -0.9
TGA1tA(UGC)A YAF9P53930 226 aa9.46□□□□□ -0.9
TGA1tA(UGC)A UTP4Q06679 776 aaKnown RBP9.46□□□□□ -0.9
TGA1tA(UGC)A GUD1Q07729 489 aa9.46□□□□□ -0.9
TGA1tA(UGC)A MET7Q08645 548 aa9.46□□□□□ -0.9
TGA1tA(UGC)A ARP8Q12386 881 aaKnown RBP RIP-Chip data9.46□□□□□ -0.9not detected
TGA1tA(UGC)A CDC19P00549 500 aaKnown RBP9.45□□□□□ -0.9
TGA1tA(UGC)A PHR1P05066 565 aaKnown RBP RIP-Chip data9.45□□□□□ -0.9not detected
TGA1tA(UGC)A TPM1P17536 199 aaKnown RBP9.45□□□□□ -0.9
TGA1tA(UGC)A BCS1P32839 456 aa9.45□□□□□ -0.9
TGA1tA(UGC)A SHP1P34223 423 aa9.45□□□□□ -0.9
TGA1tA(UGC)A VPS45P38932 577 aa9.45□□□□□ -0.9
TGA1tA(UGC)A BRE5P53741 515 aaKnown RBP9.45□□□□□ -0.9
TGA1tA(UGC)A DUS3Q06053 668 aaKnown RBP9.45□□□□□ -0.9
TGA1tA(UGC)A EST2Q06163 884 aa9.45□□□□□ -0.9
TGA1tA(UGC)A SUT2Q12286 268 aa9.45□□□□□ -0.9
TGA1tA(UGC)A YOR111WQ99210 232 aa9.45□□□□□ -0.9
TGA1tA(UGC)A DBP7P36120 742 aaKnown RBP9.44□□□□□ -0.9
TGA1tA(UGC)A NDT80P38830 627 aa9.44□□□□□ -0.9
TGA1tA(UGC)A MDM1Q01846 1127 aa9.44□□□□□ -0.9
TGA1tA(UGC)A ECM30Q06673 1274 aa9.44□□□□□ -0.9
TGA1tA(UGC)A DSE3Q08729 430 aa9.44□□□□□ -0.9
TGA1tA(UGC)A MDM20Q12387 796 aaKnown RBP9.44□□□□□ -0.9
TGA1tA(UGC)A TRL1P09880 827 aaKnown RBP9.43□□□□□ -0.9
TGA1tA(UGC)A RNR3P21672 869 aaKnown RBP9.43□□□□□ -0.9
TGA1tA(UGC)A YUR1P26725 428 aa9.43□□□□□ -0.9
TGA1tA(UGC)A MCR1P36060 302 aaKnown RBP9.43□□□□□ -0.9
TGA1tA(UGC)A SPO22P40511 975 aa9.43□□□□□ -0.9
TGA1tA(UGC)A SCS3P53012 380 aa9.43□□□□□ -0.9
TGA1tA(UGC)A BUL2Q03758 920 aaKnown RBP9.43□□□□□ -0.9
TGA1tA(UGC)A YMR321CQ04898 105 aa9.43□□□□□ -0.9
TGA1tA(UGC)A ERP3Q12403 225 aa9.43□□□□□ -0.9
TGA1tA(UGC)A LDH1P38139 375 aa9.42□□□□□ -0.9
TGA1tA(UGC)A CTR1P49573 406 aa9.42□□□□□ -0.9
TGA1tA(UGC)A YOR131CQ12486 218 aa9.42□□□□□ -0.9
TGA1tA(UGC)A MOT1P32333 1867 aa9.41□□□□□ -0.9
TGA1tA(UGC)A SRP40P32583 406 aaPredicted RBP9.41□□□□□ -0.9
TGA1tA(UGC)A UGA4P32837 571 aa9.41□□□□□ -0.9
TGA1tA(UGC)A MAL31P38156 614 aa9.41□□□□□ -0.9
TGA1tA(UGC)A KSP1P38691 1029 aaKnown RBP9.41□□□□□ -0.9
TGA1tA(UGC)A TOM71P38825 639 aaKnown RBP9.41□□□□□ -0.9
TGA1tA(UGC)A ALG2P43636 503 aa9.41□□□□□ -0.9
TGA1tA(UGC)A YLR326WQ06170 240 aaKnown RBP9.41□□□□□ -0.9
TGA1tA(UGC)A YGL039WP53183 348 aaKnown RBP9.4□□□□□ -0.9
TGA1tA(UGC)A LSB1P53281 241 aa9.4□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 53.1 ms