RNA–Protein interactions for RNA: YPR032W

SRO7, Transcript of Effector of Rab GTPase Sec4p, yeastyeast

Gene SRO7, Length 3,102 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRO7YPR032W BUD14P27637 709 aa4.41□□□□□ -1.7
SRO7YPR032W CDC3P32457 520 aaKnown RBP4.41□□□□□ -1.7
SRO7YPR032W GCN20P43535 752 aaKnown RBP4.41□□□□□ -1.7
SRO7YPR032W SDH5Q08230 162 aa4.41□□□□□ -1.7
SRO7YPR032W RUD3Q12234 484 aaKnown RBP4.41□□□□□ -1.7
SRO7YPR032W NOP56Q12460 504 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
SRO7YPR032W UBP1P25037 809 aa4.41□□□□□ -1.7
SRO7YPR032W RME1P32338 300 aaKnown RBP4.41□□□□□ -1.7
SRO7YPR032W PTC4P38089 393 aa4.41□□□□□ -1.7
SRO7YPR032W CTF18P49956 741 aa4.41□□□□□ -1.7
SRO7YPR032W DSD1P53095 428 aa4.41□□□□□ -1.7
SRO7YPR032W JJJ1P53863 590 aa4.41□□□□□ -1.7
SRO7YPR032W MFM1Q02783 413 aa4.41□□□□□ -1.7
SRO7YPR032W YML119WQ03208 357 aa4.41□□□□□ -1.7
SRO7YPR032W ELG1Q12050 791 aa4.41□□□□□ -1.7
SRO7YPR032W LSO1Q3E827 93 aa4.41□□□□□ -1.7
SRO7YPR032W FAS2P19097 1887 aaKnown RBP4.41□□□□□ -1.7
SRO7YPR032W THR4P16120 514 aaKnown RBP4.41□□□□□ -1.7
SRO7YPR032W BRF1P29056 596 aa4.41□□□□□ -1.7
SRO7YPR032W MAL33P38157 468 aa4.41□□□□□ -1.7
SRO7YPR032W PET100P38958 111 aa4.41□□□□□ -1.7
SRO7YPR032W SPO22P40511 975 aa4.41□□□□□ -1.7
SRO7YPR032W SHE10P53075 577 aa4.41□□□□□ -1.7
SRO7YPR032W YMR196WQ04336 1088 aa4.41□□□□□ -1.7
SRO7YPR032W KRE28Q04431 385 aa4.41□□□□□ -1.7
SRO7YPR032W TFC8Q12308 588 aa4.41□□□□□ -1.7
SRO7YPR032W GRX4P32642 244 aa4.4□□□□□ -1.7
SRO7YPR032W AMN1P38285 549 aaPredicted RBP4.4□□□□□ -1.7
SRO7YPR032W SHE4P51534 789 aa4.4□□□□□ -1.7
SRO7YPR032W TFB2Q02939 513 aa4.4□□□□□ -1.7
SRO7YPR032W VMS1Q04311 632 aaKnown RBP4.4□□□□□ -1.7
SRO7YPR032W ARG1P22768 420 aa4.4□□□□□ -1.71
SRO7YPR032W SEC9P40357 651 aa4.4□□□□□ -1.71
SRO7YPR032W AXL1P40851 1208 aa4.4□□□□□ -1.71
SRO7YPR032W GPD2P41911 440 aaKnown RBP4.4□□□□□ -1.71
SRO7YPR032W TAF1P46677 1066 aa4.4□□□□□ -1.71
SRO7YPR032W CCM1P48237 864 aaPredicted RBP4.4□□□□□ -1.71
SRO7YPR032W VPS38Q05919 439 aa4.4□□□□□ -1.71
SRO7YPR032W PSK2Q08217 1101 aa4.4□□□□□ -1.71
SRO7YPR032W MET7Q08645 548 aa4.4□□□□□ -1.71
SRO7YPR032W OSH2Q12451 1283 aa4.4□□□□□ -1.71
SRO7YPR032W GCD2P12754 651 aaPredicted RBP4.39□□□□□ -1.71
SRO7YPR032W CDC15P27636 974 aa4.39□□□□□ -1.71
SRO7YPR032W NIP1P32497 812 aaKnown RBP4.39□□□□□ -1.71
SRO7YPR032W CNS1P33313 385 aa4.39□□□□□ -1.71
SRO7YPR032W SEC66P33754 206 aa4.39□□□□□ -1.71
SRO7YPR032W STO1P34160 861 aaKnown RBP4.39□□□□□ -1.71
SRO7YPR032W RPC37P36121 282 aa4.39□□□□□ -1.71
SRO7YPR032W VID27P40157 782 aa4.39□□□□□ -1.71
SRO7YPR032W RIM20Q12033 661 aa4.39□□□□□ -1.71
SRO7YPR032W PET122P10355 254 aa4.39□□□□□ -1.71
SRO7YPR032W TPM1P17536 199 aaKnown RBP4.39□□□□□ -1.71
SRO7YPR032W TYR1P20049 452 aa4.39□□□□□ -1.71
SRO7YPR032W ADE2P21264 571 aaKnown RBP4.39□□□□□ -1.71
SRO7YPR032W CDC48P25694 835 aaKnown RBP4.39□□□□□ -1.71
SRO7YPR032W CSE1P33307 960 aa4.39□□□□□ -1.71
SRO7YPR032W ECM4P36156 370 aa4.39□□□□□ -1.71
SRO7YPR032W TBS1P38114 1094 aa4.39□□□□□ -1.71
SRO7YPR032W REV7P38927 245 aa4.39□□□□□ -1.71
SRO7YPR032W MAM1P40065 302 aa4.39□□□□□ -1.71
SRO7YPR032W OSW7P43611 510 aa4.39□□□□□ -1.71
SRO7YPR032W ADA2Q02336 434 aa4.39□□□□□ -1.71
SRO7YPR032W EFB1P32471 206 aaKnown RBP4.39□□□□□ -1.71
SRO7YPR032W CAJ1P39101 391 aa4.39□□□□□ -1.71
SRO7YPR032W PCL10P53124 433 aa4.39□□□□□ -1.71
SRO7YPR032W HST2P53686 357 aa4.39□□□□□ -1.71
SRO7YPR032W YKU80Q04437 629 aa4.39□□□□□ -1.71
SRO7YPR032W RPL22AP05749 121 aaKnown RBP4.38□□□□□ -1.71
SRO7YPR032W PIF1P07271 859 aa4.38□□□□□ -1.71
SRO7YPR032W YMR085WP0CF18 432 aa4.38□□□□□ -1.71
SRO7YPR032W CPS1P27614 576 aa4.38□□□□□ -1.71
SRO7YPR032W TIF3P34167 436 aaKnown RBP4.38□□□□□ -1.71
SRO7YPR032W MRP8P35719 219 aa4.38□□□□□ -1.71
SRO7YPR032W YKT6P36015 200 aaKnown RBP4.38□□□□□ -1.71
SRO7YPR032W MCX1P38323 520 aaPredicted RBP4.38□□□□□ -1.71
SRO7YPR032W YHL017WP38745 532 aa4.38□□□□□ -1.71
SRO7YPR032W NUP60P39705 539 aa4.38□□□□□ -1.71
SRO7YPR032W EFM4P40516 257 aa4.38□□□□□ -1.71
SRO7YPR032W GVP36P40531 326 aaKnown RBP4.38□□□□□ -1.71
SRO7YPR032W TMA22P47089 198 aaPredicted RBP4.38□□□□□ -1.71
SRO7YPR032W SUB1P54000 292 aaKnown RBP4.38□□□□□ -1.71
SRO7YPR032W ECM23Q02710 187 aa4.38□□□□□ -1.71
SRO7YPR032W TMA16Q08687 178 aa4.38□□□□□ -1.71
SRO7YPR032W CHS5Q12114 671 aaKnown RBP4.38□□□□□ -1.71
SRO7YPR032W DCS2Q12123 353 aa4.38□□□□□ -1.71
SRO7YPR032W PRT1P06103 763 aaKnown RBP4.38□□□□□ -1.71
SRO7YPR032W SCJ1P25303 377 aa4.38□□□□□ -1.71
SRO7YPR032W TDA3P38758 523 aa4.38□□□□□ -1.71
SRO7YPR032W ERC1P38767 581 aa4.38□□□□□ -1.71
SRO7YPR032W ARB1P40024 610 aaKnown RBP4.38□□□□□ -1.71
SRO7YPR032W SPR3P41901 512 aa4.38□□□□□ -1.71
SRO7YPR032W STB1P42845 420 aa4.38□□□□□ -1.71
SRO7YPR032W HUL5P53119 910 aa4.38□□□□□ -1.71
SRO7YPR032W SLX4Q12098 748 aa4.38□□□□□ -1.71
SRO7YPR032W GLE1Q12315 538 aa4.38□□□□□ -1.71
SRO7YPR032W RAD1P06777 1100 aa4.37□□□□□ -1.71
SRO7YPR032W SSA1P10591 642 aaKnown RBP4.37□□□□□ -1.71
SRO7YPR032W SSA2P10592 639 aaKnown RBP4.37□□□□□ -1.71
SRO7YPR032W SWC3P31376 625 aa4.37□□□□□ -1.71
SRO7YPR032W RPN2P32565 945 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 75.1 ms