RNA–Protein interactions for RNA: YPL010W

RET3, Transcript of Zeta subunit of the coatomer complex (COPI), yeast

Gene RET3, Length 570 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RET3	YPL010W	IKI3	Q06706	1349 aa	Known RBP	5.74	□□□□□ -1.49
RET3	YPL010W	SSA4	P22202	642 aa	Known RBP	5.73	□□□□□ -1.49
RET3	YPL010W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	5.73	□□□□□ -1.49	not detected
RET3	YPL010W	UGA2	P38067	497 aa		5.73	□□□□□ -1.49
RET3	YPL010W	TAF5	P38129	798 aa		5.73	□□□□□ -1.49
RET3	YPL010W	LDH1	P38139	375 aa		5.73	□□□□□ -1.49
RET3	YPL010W	GIP1	P38229	639 aa		5.73	□□□□□ -1.49
RET3	YPL010W	LSB6	P42951	607 aa		5.73	□□□□□ -1.49
RET3	YPL010W	CWC15	Q03772	175 aa	Known RBP	5.73	□□□□□ -1.49
RET3	YPL010W	SBP1	P10080	294 aa	Known RBP	5.72	□□□□□ -1.49
RET3	YPL010W	PRY1	P47032	299 aa		5.72	□□□□□ -1.49
RET3	YPL010W	GLT1	Q12680	2145 aa	Known RBP	5.71	□□□□□ -1.5
RET3	YPL010W	AI3	P03877	415 aa		5.71	□□□□□ -1.5
RET3	YPL010W	SSA1	P10591	642 aa	Known RBP	5.71	□□□□□ -1.5
RET3	YPL010W	ISW1	P38144	1129 aa		5.71	□□□□□ -1.5
RET3	YPL010W	FOX2	Q02207	900 aa	Known RBP	5.71	□□□□□ -1.5
RET3	YPL010W	YPL034W	Q03083	165 aa		5.71	□□□□□ -1.5
RET3	YPL010W	PUN1	Q06991	263 aa		5.71	□□□□□ -1.5
RET3	YPL010W	MCA1	Q08601	432 aa		5.71	□□□□□ -1.5
RET3	YPL010W	ISC10	P32645	267 aa		5.7	□□□□□ -1.5
RET3	YPL010W	SFA1	P32771	386 aa		5.7	□□□□□ -1.5
RET3	YPL010W	RSC2	Q06488	889 aa		5.7	□□□□□ -1.5
RET3	YPL010W	RAD9	P14737	1309 aa		5.7	□□□□□ -1.5
RET3	YPL010W	RAV1	P47104	1357 aa		5.69	□□□□□ -1.5
RET3	YPL010W	MRP10	O75012	95 aa		5.69	□□□□□ -1.5
RET3	YPL010W	PRP5	P21372	849 aa	Predicted RBP	5.69	□□□□□ -1.5
RET3	YPL010W	BSD2	P38356	321 aa		5.69	□□□□□ -1.5
RET3	YPL010W	NOB1	Q08444	459 aa	Known RBP	5.69	□□□□□ -1.5
RET3	YPL010W	YBR287W	P38355	427 aa		5.68	□□□□□ -1.5
RET3	YPL010W	YIL165C	P40446	119 aa		5.68	□□□□□ -1.5
RET3	YPL010W	RPN11	P43588	306 aa	Known RBP	5.68	□□□□□ -1.5
RET3	YPL010W	YJL181W	P46987	611 aa		5.68	□□□□□ -1.5
RET3	YPL010W	SAC7	P17121	654 aa		5.67	□□□□□ -1.5
RET3	YPL010W	MSN1	P22148	382 aa		5.67	□□□□□ -1.5
RET3	YPL010W	PGM1	P33401	570 aa	Known RBP	5.67	□□□□□ -1.5
RET3	YPL010W	ARI1	P53111	347 aa	Known RBP	5.67	□□□□□ -1.5
RET3	YPL010W	APC11	Q12157	165 aa		5.67	□□□□□ -1.5
RET3	YPL010W	RTC1	Q08281	1341 aa		5.67	□□□□□ -1.5
RET3	YPL010W	EDE1	P34216	1381 aa		5.67	□□□□□ -1.5
RET3	YPL010W	TY3B-I	Q7LHG5	1498 aa	Known RBP	5.66	□□□□□ -1.5
RET3	YPL010W	TY4B-P	A0A0B7P3V8	1104 aa		5.66	□□□□□ -1.5
RET3	YPL010W	YEF3	P16521	1044 aa	Known RBP	5.66	□□□□□ -1.5
RET3	YPL010W	RRM3	P38766	723 aa		5.66	□□□□□ -1.5
RET3	YPL010W	YML083C	Q04526	418 aa		5.66	□□□□□ -1.5
RET3	YPL010W	TY4A-H	Q6Q5P6	413 aa		5.66	□□□□□ -1.5
RET3	YPL010W	SSM4	P40318	1319 aa		5.65	□□□□□ -1.51
RET3	YPL010W	DOT5	P40553	215 aa		5.64	□□□□□ -1.51
RET3	YPL010W	HXT8	P40886	569 aa		5.64	□□□□□ -1.51
RET3	YPL010W	PNP1	Q05788	311 aa		5.64	□□□□□ -1.51
RET3	YPL010W	LSO1	Q3E827	93 aa		5.64	□□□□□ -1.51
RET3	YPL010W	RRN6	P32786	894 aa		5.63	□□□□□ -1.51
RET3	YPL010W	GIP2	P40036	548 aa		5.63	□□□□□ -1.51
RET3	YPL010W	LEM3	P42838	414 aa		5.63	□□□□□ -1.51
RET3	YPL010W	LYS4	P49367	693 aa	Predicted RBP	5.63	□□□□□ -1.51
RET3	YPL010W	PPT1	P53043	513 aa		5.63	□□□□□ -1.51
RET3	YPL010W	NOP7	P53261	605 aa	Known RBP	5.63	□□□□□ -1.51
RET3	YPL010W	EMG1	Q06287	252 aa	Known RBP	5.63	□□□□□ -1.51
RET3	YPL010W	PRP40	P33203	583 aa	Known RBP	5.62	□□□□□ -1.51
RET3	YPL010W	KTR2	P33550	425 aa		5.62	□□□□□ -1.51
RET3	YPL010W	FIR1	P40020	876 aa		5.62	□□□□□ -1.51
RET3	YPL010W	NTA1	P40354	457 aa		5.62	□□□□□ -1.51
RET3	YPL010W	GUP1	P53154	560 aa		5.62	□□□□□ -1.51
RET3	YPL010W	RCM1	P53972	490 aa		5.62	□□□□□ -1.51
RET3	YPL010W	TAF8	Q03750	510 aa		5.62	□□□□□ -1.51
RET3	YPL010W	GAS5	Q08193	484 aa		5.62	□□□□□ -1.51
RET3	YPL010W	SOG2	Q08817	791 aa		5.62	□□□□□ -1.51
RET3	YPL010W	GCN2	P15442	1659 aa		5.61	□□□□□ -1.51
RET3	YPL010W	ESL2	P36168	1195 aa		5.61	□□□□□ -1.51
RET3	YPL010W	INP51	P40559	946 aa	Known RBP	5.61	□□□□□ -1.51
RET3	YPL010W	RGD2	P43556	714 aa		5.61	□□□□□ -1.51
RET3	YPL010W	BIO5	P53744	561 aa	Known RBP	5.61	□□□□□ -1.51
RET3	YPL010W	DSE4	P53753	1117 aa		5.61	□□□□□ -1.51
RET3	YPL010W	RLF2	Q12495	606 aa		5.61	□□□□□ -1.51
RET3	YPL010W	PSK1	P31374	1356 aa		5.6	□□□□□ -1.51
RET3	YPL010W	ROM2	P51862	1356 aa	Known RBP	5.6	□□□□□ -1.51
RET3	YPL010W	RSC6	P25632	483 aa		5.6	□□□□□ -1.51
RET3	YPL010W	BOI1	P38041	980 aa	Known RBP	5.6	□□□□□ -1.51
RET3	YPL010W	ENP1	P38333	483 aa	Known RBP	5.6	□□□□□ -1.51
RET3	YPL010W	AIM46	P38885	310 aa		5.6	□□□□□ -1.51
RET3	YPL010W	SOK2	P53438	785 aa	Predicted RBP	5.6	□□□□□ -1.51
RET3	YPL010W	SUB2	Q07478	446 aa	Known RBP	5.6	□□□□□ -1.51
RET3	YPL010W	NPR2	P39923	615 aa		5.59	□□□□□ -1.51
RET3	YPL010W	TED1	P40533	473 aa		5.59	□□□□□ -1.51
RET3	YPL010W	TY1A-NL1	Q12391	440 aa	Known RBP	5.59	□□□□□ -1.51
RET3	YPL010W	SMC1	P32908	1225 aa		5.58	□□□□□ -1.52
RET3	YPL010W	INP52	P50942	1183 aa		5.58	□□□□□ -1.52
RET3	YPL010W	ALD3	P54114	506 aa		5.58	□□□□□ -1.52
RET3	YPL010W	FUS1	P11710	512 aa		5.57	□□□□□ -1.52
RET3	YPL010W	PPH3	P32345	308 aa		5.56	□□□□□ -1.52
RET3	YPL010W	YKL133C	P36066	463 aa		5.56	□□□□□ -1.52
RET3	YPL010W	TFA2	P36145	328 aa		5.56	□□□□□ -1.52
RET3	YPL010W	SLM3	Q12093	417 aa		5.56	□□□□□ -1.52
RET3	YPL010W	RSF2	P46974	1380 aa		5.55	□□□□□ -1.52
RET3	YPL010W	SPT7	P35177	1332 aa		5.55	□□□□□ -1.52
RET3	YPL010W	FUR4	P05316	633 aa	Known RBP	5.55	□□□□□ -1.52
RET3	YPL010W	HVG1	P0CE11	249 aa		5.55	□□□□□ -1.52
RET3	YPL010W	COQ2	P32378	372 aa		5.55	□□□□□ -1.52
RET3	YPL010W	MAC1	P35192	417 aa		5.55	□□□□□ -1.52
RET3	YPL010W	IRS4	P36115	615 aa	Known RBP	5.55	□□□□□ -1.52
RET3	YPL010W	PAN5	P38787	379 aa		5.55	□□□□□ -1.52

Retrieved 100 of 5,963 RNA–protein pairs in 67.9 ms