RNA–Protein interactions for RNA: YOR276W

CAF20, Transcript of Phosphoprotein of the mRNA cap-binding complex, yeast

Gene CAF20, Length 486 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF20	YOR276W	HVG1	P0CE11	249 aa		5.35	□□□□□ -1.55
CAF20	YOR276W	NAM7	P30771	971 aa	Known RBP	5.35	□□□□□ -1.55
CAF20	YOR276W	MAE1	P36013	669 aa	Known RBP	5.35	□□□□□ -1.55
CAF20	YOR276W	YNR065C	P53751	1116 aa		5.35	□□□□□ -1.55
CAF20	YOR276W	SPO71	Q03868	1245 aa		5.35	□□□□□ -1.55
CAF20	YOR276W	GLT1	Q12680	2145 aa	Known RBP	5.35	□□□□□ -1.55
CAF20	YOR276W	VPS35	P34110	944 aa		5.34	□□□□□ -1.55
CAF20	YOR276W	TOS1	P38288	455 aa		5.34	□□□□□ -1.55
CAF20	YOR276W	SAM37	P50110	327 aa		5.34	□□□□□ -1.55
CAF20	YOR276W	YGR130C	P53278	816 aa		5.34	□□□□□ -1.55
CAF20	YOR276W	NCE103	P53615	221 aa		5.34	□□□□□ -1.55
CAF20	YOR276W	VPS16	Q03308	798 aa		5.34	□□□□□ -1.55
CAF20	YOR276W	ELG1	Q12050	791 aa		5.34	□□□□□ -1.55
CAF20	YOR276W	GLO4	Q12320	285 aa		5.34	□□□□□ -1.55
CAF20	YOR276W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	5.33	□□□□□ -1.56	RIP-Chip
CAF20	YOR276W	YJR124C	P47159	448 aa		5.33	□□□□□ -1.56
CAF20	YOR276W	CTH1	P47976	325 aa		5.33	□□□□□ -1.56
CAF20	YOR276W	BSC2	Q05611	235 aa		5.33	□□□□□ -1.56
CAF20	YOR276W	FPR4	Q06205	392 aa	Predicted RBP	5.33	□□□□□ -1.56
CAF20	YOR276W	TOS4	Q06266	489 aa		5.33	□□□□□ -1.56
CAF20	YOR276W	NOC3	Q07896	663 aa	Predicted RBP	5.33	□□□□□ -1.56
CAF20	YOR276W	OXR1	Q08952	273 aa		5.33	□□□□□ -1.56
CAF20	YOR276W	PIN2	Q12057	282 aa		5.33	□□□□□ -1.56
CAF20	YOR276W	YOL098C	Q12496	1037 aa		5.33	□□□□□ -1.56
CAF20	YOR276W	PYC2	P32327	1180 aa	Known RBP	5.32	□□□□□ -1.56
CAF20	YOR276W	LIP5	P32875	414 aa		5.32	□□□□□ -1.56
CAF20	YOR276W	BRN1	P38170	754 aa		5.32	□□□□□ -1.56
CAF20	YOR276W	CIC1	P38779	376 aa	Known RBP	5.32	□□□□□ -1.56
CAF20	YOR276W	NEO1	P40527	1151 aa		5.32	□□□□□ -1.56
CAF20	YOR276W	IRC24	P40580	263 aa		5.32	□□□□□ -1.56
CAF20	YOR276W	SPO74	P45819	413 aa		5.32	□□□□□ -1.56
CAF20	YOR276W	YGR122W	P53272	402 aa		5.32	□□□□□ -1.56
CAF20	YOR276W	RMD1	Q03441	430 aa		5.32	□□□□□ -1.56
CAF20	YOR276W	HAS1	Q03532	505 aa	Known RBP	5.32	□□□□□ -1.56
CAF20	YOR276W	ESF1	Q06344	628 aa	Known RBP	5.32	□□□□□ -1.56
CAF20	YOR276W	CYC8	P14922	966 aa		5.31	□□□□□ -1.56
CAF20	YOR276W	ERS1	P17261	260 aa		5.31	□□□□□ -1.56
CAF20	YOR276W	CLN2	P20438	545 aa		5.31	□□□□□ -1.56
CAF20	YOR276W	RSC4	Q02206	625 aa		5.31	□□□□□ -1.56
CAF20	YOR276W	BRE4	Q07660	1125 aa		5.31	□□□□□ -1.56
CAF20	YOR276W	CYC7	P00045	113 aa		5.3	□□□□□ -1.56
CAF20	YOR276W	PET112	P33893	541 aa		5.3	□□□□□ -1.56
CAF20	YOR276W	FAA3	P39002	694 aa		5.3	□□□□□ -1.56
CAF20	YOR276W	FET4	P40988	552 aa		5.3	□□□□□ -1.56
CAF20	YOR276W	RAD2	P07276	1031 aa		5.29	□□□□□ -1.56
CAF20	YOR276W	MSB1	P21339	1137 aa	Known RBP	5.29	□□□□□ -1.56
CAF20	YOR276W	SRP40	P32583	406 aa	Predicted RBP	5.29	□□□□□ -1.56
CAF20	YOR276W	KIP3	P53086	805 aa	Known RBP	5.29	□□□□□ -1.56
CAF20	YOR276W	CWC24	P53769	259 aa		5.29	□□□□□ -1.56
CAF20	YOR276W	CTR9	P89105	1077 aa		5.29	□□□□□ -1.56
CAF20	YOR276W	DAL4	Q04895	635 aa		5.29	□□□□□ -1.56
CAF20	YOR276W	INP54	Q08227	384 aa	Known RBP	5.29	□□□□□ -1.56
CAF20	YOR276W	WRS1	Q12109	432 aa	Known RBP	5.29	□□□□□ -1.56
CAF20	YOR276W	HXK1	P04806	485 aa	Known RBP	5.28	□□□□□ -1.56
CAF20	YOR276W	SPC42	P36094	363 aa		5.28	□□□□□ -1.56
CAF20	YOR276W	AVT1	P47082	602 aa		5.28	□□□□□ -1.56
CAF20	YOR276W	SSF2	Q12153	453 aa	Predicted RBP	5.28	□□□□□ -1.56
CAF20	YOR276W	YKL091C	P33324	310 aa	Known RBP	5.27	□□□□□ -1.57
CAF20	YOR276W	YHL008C	P38750	627 aa		5.27	□□□□□ -1.57
CAF20	YOR276W	IOC3	P43596	787 aa		5.27	□□□□□ -1.57
CAF20	YOR276W	RNH70	P53331	553 aa		5.27	□□□□□ -1.57
CAF20	YOR276W	FAR11	P53917	953 aa		5.27	□□□□□ -1.57
CAF20	YOR276W	GIC2	Q06648	383 aa		5.27	□□□□□ -1.57
CAF20	YOR276W	MNR2	P35724	969 aa		5.26	□□□□□ -1.57
CAF20	YOR276W	COB	P00163	385 aa		5.25	□□□□□ -1.57
CAF20	YOR276W	PPG1	P32838	368 aa		5.25	□□□□□ -1.57
CAF20	YOR276W	NMD2	P38798	1089 aa	Known RBP	5.25	□□□□□ -1.57
CAF20	YOR276W	MRPS18	P42847	217 aa		5.25	□□□□□ -1.57
CAF20	YOR276W	YAF9	P53930	226 aa		5.25	□□□□□ -1.57
CAF20	YOR276W	YCS4	Q06156	1176 aa		5.25	□□□□□ -1.57
CAF20	YOR276W	YOR223W	Q12015	292 aa		5.25	□□□□□ -1.57
CAF20	YOR276W	FLP1	P03870	423 aa		5.24	□□□□□ -1.57
CAF20	YOR276W	PRE9	P23638	258 aa	Known RBP	5.24	□□□□□ -1.57
CAF20	YOR276W	ELM1	P32801	640 aa		5.24	□□□□□ -1.57
CAF20	YOR276W	UGA4	P32837	571 aa		5.24	□□□□□ -1.57
CAF20	YOR276W	PRP40	P33203	583 aa	Known RBP	5.24	□□□□□ -1.57
CAF20	YOR276W	DOS2	P54858	310 aa		5.24	□□□□□ -1.57
CAF20	YOR276W	AOS1	Q06624	347 aa		5.24	□□□□□ -1.57
CAF20	YOR276W	RIM11	P38615	370 aa		5.23	□□□□□ -1.57
CAF20	YOR276W	GDE1	Q02979	1223 aa		5.23	□□□□□ -1.57
CAF20	YOR276W	NSE3	Q05541	303 aa		5.23	□□□□□ -1.57
CAF20	YOR276W	CDC53	Q12018	815 aa	Known RBP	5.23	□□□□□ -1.57
CAF20	YOR276W	MCD1	Q12158	566 aa		5.23	□□□□□ -1.57
CAF20	YOR276W	CIT2	P08679	460 aa		5.22	□□□□□ -1.57
CAF20	YOR276W	PRP5	P21372	849 aa	Predicted RBP	5.22	□□□□□ -1.57
CAF20	YOR276W	NPR1	P22211	790 aa		5.22	□□□□□ -1.57
CAF20	YOR276W	MCM5	P29496	775 aa	Known RBP	5.22	□□□□□ -1.57
CAF20	YOR276W	YJL049W	P47048	450 aa		5.22	□□□□□ -1.57
CAF20	YOR276W	FAA4	P47912	694 aa	Known RBP	5.22	□□□□□ -1.57
CAF20	YOR276W	MON1	P53129	644 aa		5.22	□□□□□ -1.57
CAF20	YOR276W	MSH6	Q03834	1242 aa		5.22	□□□□□ -1.57
CAF20	YOR276W	YMR074C	Q04773	145 aa		5.22	□□□□□ -1.57
CAF20	YOR276W	YIG1	Q08956	461 aa		5.22	□□□□□ -1.57
CAF20	YOR276W	CMR1	Q12510	522 aa	Known RBP	5.22	□□□□□ -1.57
CAF20	YOR276W	HTS1	P07263	546 aa	Known RBP	5.21	□□□□□ -1.58
CAF20	YOR276W	PRI2	P20457	528 aa		5.21	□□□□□ -1.58
CAF20	YOR276W	DUR3	P33413	735 aa		5.21	□□□□□ -1.58
CAF20	YOR276W	SEA4	P38164	1038 aa		5.21	□□□□□ -1.58
CAF20	YOR276W	ECM2	P38241	364 aa	Known RBP	5.21	□□□□□ -1.58
CAF20	YOR276W	MMM1	P41800	426 aa		5.21	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms