RNA–Protein interactions for RNA: YNL258C

DSL1, Transcript of Peripheral membrane protein needed for Golgi-to-ER retrograde traffic, yeast

Gene DSL1, Length 2,265 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DSL1	YNL258C	YNR040W	P53736	256 aa		4.94	□□□□□ -1.62
DSL1	YNL258C	MRL1	Q06815	381 aa		4.94	□□□□□ -1.62
DSL1	YNL258C	NOP14	Q99207	810 aa	Known RBP	4.94	□□□□□ -1.62
DSL1	YNL258C	NPR1	P22211	790 aa		4.93	□□□□□ -1.62
DSL1	YNL258C	BET3	P36149	193 aa		4.93	□□□□□ -1.62
DSL1	YNL258C	VBA5	P36172	582 aa		4.93	□□□□□ -1.62
DSL1	YNL258C	AAD14	P42884	376 aa		4.93	□□□□□ -1.62
DSL1	YNL258C	YJL171C	P46992	396 aa		4.93	□□□□□ -1.62
DSL1	YNL258C	YNR029C	P53729	429 aa	Known RBP	4.93	□□□□□ -1.62
DSL1	YNL258C	TMA46	Q12000	345 aa	Known RBP	4.93	□□□□□ -1.62
DSL1	YNL258C	BMT6	Q12291	365 aa		4.93	□□□□□ -1.62
DSL1	YNL258C	RPL8A	P17076	256 aa	Known RBP	4.93	□□□□□ -1.62
DSL1	YNL258C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
DSL1	YNL258C	PAF1	P38351	445 aa		4.93	□□□□□ -1.62
DSL1	YNL258C	ALA1	P40825	983 aa	Known RBP	4.93	□□□□□ -1.62
DSL1	YNL258C	SIW14	P53965	281 aa		4.93	□□□□□ -1.62
DSL1	YNL258C	YOL057W	Q08225	711 aa		4.93	□□□□□ -1.62
DSL1	YNL258C	ABD1	P32783	436 aa	Predicted RBP	4.92	□□□□□ -1.62
DSL1	YNL258C	AMN1	P38285	549 aa	Predicted RBP	4.92	□□□□□ -1.62
DSL1	YNL258C	PEX28	P38848	579 aa		4.92	□□□□□ -1.62
DSL1	YNL258C	YEN1	P40028	759 aa		4.92	□□□□□ -1.62
DSL1	YNL258C	IRR1	P40541	1150 aa		4.92	□□□□□ -1.62
DSL1	YNL258C	MSH4	P40965	878 aa	Predicted RBP	4.92	□□□□□ -1.62
DSL1	YNL258C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
DSL1	YNL258C	MSB3	P48566	633 aa	Predicted RBP	4.92	□□□□□ -1.62
DSL1	YNL258C	YGR125W	P53273	1036 aa		4.92	□□□□□ -1.62
DSL1	YNL258C	MSH2	P25847	964 aa		4.92	□□□□□ -1.62
DSL1	YNL258C	PMT7	Q06644	662 aa		4.92	□□□□□ -1.62
DSL1	YNL258C	NTG2	Q08214	380 aa		4.92	□□□□□ -1.62
DSL1	YNL258C	YPL066W	Q12194	479 aa		4.92	□□□□□ -1.62
DSL1	YNL258C	SBP1	P10080	294 aa	Known RBP	4.91	□□□□□ -1.62
DSL1	YNL258C	TAF13	P11747	167 aa		4.91	□□□□□ -1.62
DSL1	YNL258C	MSH3	P25336	1018 aa		4.91	□□□□□ -1.62
DSL1	YNL258C	THI4	P32318	326 aa		4.91	□□□□□ -1.62
DSL1	YNL258C	EXO5	P38289	585 aa		4.91	□□□□□ -1.62
DSL1	YNL258C	TPM2	P40414	161 aa		4.91	□□□□□ -1.62
DSL1	YNL258C	CIT1	P00890	479 aa		4.9	□□□□□ -1.62
DSL1	YNL258C	SBA1	P28707	216 aa	Known RBP	4.9	□□□□□ -1.62
DSL1	YNL258C	APM2	P38700	605 aa		4.9	□□□□□ -1.62
DSL1	YNL258C	PMC1	P38929	1173 aa	Predicted RBP	4.9	□□□□□ -1.62
DSL1	YNL258C	YER156C	P40093	338 aa	Known RBP	4.9	□□□□□ -1.62
DSL1	YNL258C	UTP8	P53276	713 aa	Known RBP	4.9	□□□□□ -1.62
DSL1	YNL258C	RGP1	P16664	663 aa		4.9	□□□□□ -1.63
DSL1	YNL258C	YLR225C	Q05948	407 aa	Known RBP	4.9	□□□□□ -1.63
DSL1	YNL258C	LYP1	P32487	611 aa		4.89	□□□□□ -1.63
DSL1	YNL258C	TFA2	P36145	328 aa		4.89	□□□□□ -1.63
DSL1	YNL258C	CRP1	P38845	465 aa	Known RBP	4.89	□□□□□ -1.63
DSL1	YNL258C	GLO4	Q12320	285 aa		4.89	□□□□□ -1.63
DSL1	YNL258C	HSP60	P19882	572 aa	Known RBP	4.89	□□□□□ -1.63
DSL1	YNL258C	MRP8	P35719	219 aa		4.89	□□□□□ -1.63
DSL1	YNL258C	ENT3	P47160	408 aa		4.89	□□□□□ -1.63
DSL1	YNL258C	SPO75	Q07798	868 aa		4.89	□□□□□ -1.63
DSL1	YNL258C	IDI1	P15496	288 aa		4.88	□□□□□ -1.63
DSL1	YNL258C	SRM1	P21827	482 aa		4.88	□□□□□ -1.63
DSL1	YNL258C	MKK2	P32491	506 aa		4.88	□□□□□ -1.63
DSL1	YNL258C	VRP1	P37370	817 aa		4.88	□□□□□ -1.63
DSL1	YNL258C	GGA2	P38817	585 aa	Known RBP	4.88	□□□□□ -1.63
DSL1	YNL258C	TPO2	P53283	614 aa		4.88	□□□□□ -1.63
DSL1	YNL258C	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.88	□□□□□ -1.63
DSL1	YNL258C	TY1A-DR6	P0CX70	440 aa		4.88	□□□□□ -1.63
DSL1	YNL258C	TY1A-ER1	P0CX71	440 aa		4.88	□□□□□ -1.63
DSL1	YNL258C	TY1A-LR2	P0CX72	440 aa		4.88	□□□□□ -1.63
DSL1	YNL258C	TY1A-PL	P0CX73	440 aa		4.88	□□□□□ -1.63
DSL1	YNL258C	TY1A-JR1	P0CX74	440 aa		4.88	□□□□□ -1.63
DSL1	YNL258C	TY1A-LR3	P0CX75	440 aa		4.88	□□□□□ -1.63
DSL1	YNL258C	TY1A-ML2	P0CX76	440 aa		4.88	□□□□□ -1.63
DSL1	YNL258C	FUS1	P11710	512 aa		4.88	□□□□□ -1.63
DSL1	YNL258C	GAL11	P19659	1081 aa		4.88	□□□□□ -1.63
DSL1	YNL258C	YBR287W	P38355	427 aa		4.88	□□□□□ -1.63
DSL1	YNL258C	YTA6	P40328	754 aa		4.88	□□□□□ -1.63
DSL1	YNL258C	AIR1	P40507	360 aa	Known RBP	4.88	□□□□□ -1.63
DSL1	YNL258C	RSM26	P47141	266 aa		4.88	□□□□□ -1.63
DSL1	YNL258C	GPG1	P53130	126 aa		4.88	□□□□□ -1.63
DSL1	YNL258C	ROD1	Q02805	837 aa		4.88	□□□□□ -1.63
DSL1	YNL258C	TIF35	Q04067	274 aa	Known RBP	4.88	□□□□□ -1.63
DSL1	YNL258C	TY1A-GR1	Q12085	440 aa		4.88	□□□□□ -1.63
DSL1	YNL258C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.88	□□□□□ -1.63
DSL1	YNL258C	TY1A-OL	Q92392	440 aa	Known RBP	4.88	□□□□□ -1.63
DSL1	YNL258C	AFT1	P22149	690 aa		4.87	□□□□□ -1.63
DSL1	YNL258C	HBS1	P32769	611 aa	Known RBP	4.87	□□□□□ -1.63
DSL1	YNL258C	PBY1	P38254	753 aa		4.87	□□□□□ -1.63
DSL1	YNL258C	ERP6	P53198	216 aa		4.87	□□□□□ -1.63
DSL1	YNL258C	FOL1	P53848	824 aa		4.87	□□□□□ -1.63
DSL1	YNL258C	EAF1	Q06337	982 aa		4.87	□□□□□ -1.63
DSL1	YNL258C	ATG13	Q06628	738 aa		4.87	□□□□□ -1.63
DSL1	YNL258C	AMS1	P22855	1083 aa		4.86	□□□□□ -1.63
DSL1	YNL258C	CDC11	P32458	415 aa		4.86	□□□□□ -1.63
DSL1	YNL258C	DLD1	P32891	587 aa		4.86	□□□□□ -1.63
DSL1	YNL258C	AHP1	P38013	176 aa	Known RBP	4.86	□□□□□ -1.63
DSL1	YNL258C	RGA1	P39083	1007 aa		4.86	□□□□□ -1.63
DSL1	YNL258C	PEX13	P80667	386 aa		4.86	□□□□□ -1.63
DSL1	YNL258C	OSH2	Q12451	1283 aa		4.86	□□□□□ -1.63
DSL1	YNL258C	ADR1	P07248	1323 aa		4.86	□□□□□ -1.63
DSL1	YNL258C	YJR098C	P47139	656 aa		4.86	□□□□□ -1.63
DSL1	YNL258C	PEX8	P53248	589 aa		4.86	□□□□□ -1.63
DSL1	YNL258C	ARG82	P07250	355 aa		4.85	□□□□□ -1.63
DSL1	YNL258C	VMA4	P22203	233 aa	Known RBP	4.85	□□□□□ -1.63
DSL1	YNL258C	MEF1	P25039	761 aa		4.85	□□□□□ -1.63
DSL1	YNL258C	SQT1	P35184	431 aa		4.85	□□□□□ -1.63
DSL1	YNL258C	MSC7	P38694	644 aa		4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 57.3 ms