RNA–Protein interactions for RNA: YMR197C

VTI1, Transcript of Protein involved in cis-Golgi membrane traffic, yeast

Gene VTI1, Length 654 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTI1	YMR197C	MNL2	Q12205	849 aa		4.3	□□□□□ -1.72
VTI1	YMR197C	FLP1	P03870	423 aa		4.29	□□□□□ -1.72
VTI1	YMR197C	RPS4A	P0CX35	261 aa	Known RBP	4.29	□□□□□ -1.72
VTI1	YMR197C	RPS4B	P0CX36	261 aa	Known RBP	4.29	□□□□□ -1.72
VTI1	YMR197C	GRS1	P38088	690 aa	Known RBP	4.29	□□□□□ -1.72
VTI1	YMR197C	REI1	P38344	393 aa	Predicted RBP	4.29	□□□□□ -1.72
VTI1	YMR197C	OYE3	P41816	400 aa	Predicted RBP	4.29	□□□□□ -1.72
VTI1	YMR197C	UTP22	P53254	1237 aa	Predicted RBP	4.29	□□□□□ -1.72
VTI1	YMR197C	DFG16	Q99234	619 aa		4.29	□□□□□ -1.72
VTI1	YMR197C	TRL1	P09880	827 aa	Known RBP	4.28	□□□□□ -1.72
VTI1	YMR197C	MSH4	P40965	878 aa	Predicted RBP	4.28	□□□□□ -1.72
VTI1	YMR197C	SAP155	P43612	1002 aa		4.28	□□□□□ -1.72
VTI1	YMR197C	ECL1	P48235	211 aa		4.28	□□□□□ -1.72
VTI1	YMR197C	NUT1	P53114	1132 aa		4.28	□□□□□ -1.72
VTI1	YMR197C	PMT7	Q06644	662 aa		4.28	□□□□□ -1.72
VTI1	YMR197C	HSP78	P33416	811 aa		4.27	□□□□□ -1.73
VTI1	YMR197C	UBP5	P39944	805 aa		4.27	□□□□□ -1.73
VTI1	YMR197C	ALT1	P52893	592 aa		4.27	□□□□□ -1.73
VTI1	YMR197C	YAF9	P53930	226 aa		4.27	□□□□□ -1.73
VTI1	YMR197C	EAR1	Q03212	550 aa		4.27	□□□□□ -1.73
VTI1	YMR197C	INP54	Q08227	384 aa	Known RBP	4.27	□□□□□ -1.73
VTI1	YMR197C	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.26	□□□□□ -1.73
VTI1	YMR197C	TY1A-DR6	P0CX70	440 aa		4.26	□□□□□ -1.73
VTI1	YMR197C	TY1A-ER1	P0CX71	440 aa		4.26	□□□□□ -1.73
VTI1	YMR197C	TY1A-LR2	P0CX72	440 aa		4.26	□□□□□ -1.73
VTI1	YMR197C	TY1A-PL	P0CX73	440 aa		4.26	□□□□□ -1.73
VTI1	YMR197C	TY1A-JR1	P0CX74	440 aa		4.26	□□□□□ -1.73
VTI1	YMR197C	TY1A-LR3	P0CX75	440 aa		4.26	□□□□□ -1.73
VTI1	YMR197C	TY1A-ML2	P0CX76	440 aa		4.26	□□□□□ -1.73
VTI1	YMR197C	MCM5	P29496	775 aa	Known RBP	4.26	□□□□□ -1.73
VTI1	YMR197C	CDC3	P32457	520 aa	Known RBP	4.26	□□□□□ -1.73
VTI1	YMR197C	MON1	P53129	644 aa		4.26	□□□□□ -1.73
VTI1	YMR197C	TY1A-GR1	Q12085	440 aa		4.26	□□□□□ -1.73
VTI1	YMR197C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.26	□□□□□ -1.73
VTI1	YMR197C	TY1A-OL	Q92392	440 aa	Known RBP	4.26	□□□□□ -1.73
VTI1	YMR197C	GAS1	P22146	559 aa	Known RBP	4.25	□□□□□ -1.73
VTI1	YMR197C	ERP5	P38819	212 aa		4.25	□□□□□ -1.73
VTI1	YMR197C	NIT1	P40447	199 aa		4.25	□□□□□ -1.73
VTI1	YMR197C	MDJ2	P42834	146 aa		4.25	□□□□□ -1.73
VTI1	YMR197C	ELA1	P53861	379 aa	Predicted RBP	4.25	□□□□□ -1.73
VTI1	YMR197C	YBL113C	Q7M4S9	792 aa		4.25	□□□□□ -1.73
VTI1	YMR197C	FRT1	Q99332	602 aa		4.25	□□□□□ -1.73
VTI1	YMR197C	ADP1	P25371	1049 aa		4.24	□□□□□ -1.73
VTI1	YMR197C	NFS1	P25374	497 aa		4.24	□□□□□ -1.73
VTI1	YMR197C	SMY2	P32909	740 aa	Known RBP	4.24	□□□□□ -1.73
VTI1	YMR197C	PRP43	P53131	767 aa	Known RBP	4.24	□□□□□ -1.73
VTI1	YMR197C	YGR045C	P53229	120 aa		4.24	□□□□□ -1.73
VTI1	YMR197C	GPI13	Q07830	1017 aa		4.24	□□□□□ -1.73
VTI1	YMR197C	AVO1	Q08236	1176 aa		4.24	□□□□□ -1.73
VTI1	YMR197C	TRE1	Q08919	783 aa		4.24	□□□□□ -1.73
VTI1	YMR197C	YVC1	Q12324	675 aa		4.24	□□□□□ -1.73
VTI1	YMR197C	RVS167	P39743	482 aa	Known RBP	4.23	□□□□□ -1.73
VTI1	YMR197C	NUT2	Q06213	157 aa		4.23	□□□□□ -1.73
VTI1	YMR197C	NOC3	Q07896	663 aa	Predicted RBP	4.23	□□□□□ -1.73
VTI1	YMR197C	HAT1	Q12341	374 aa		4.23	□□□□□ -1.73
VTI1	YMR197C	PRO1	P32264	428 aa		4.22	□□□□□ -1.73
VTI1	YMR197C	NNK1	P36003	928 aa		4.22	□□□□□ -1.73
VTI1	YMR197C	YKL077W	P36081	392 aa		4.22	□□□□□ -1.73
VTI1	YMR197C	ARL1	P38116	183 aa	Known RBP	4.22	□□□□□ -1.73
VTI1	YMR197C	EXO5	P38289	585 aa		4.22	□□□□□ -1.73
VTI1	YMR197C	SSY1	Q03770	852 aa		4.22	□□□□□ -1.73
VTI1	YMR197C	GEF1	P37020	779 aa		4.21	□□□□□ -1.74
VTI1	YMR197C	PEX7	P39108	375 aa		4.21	□□□□□ -1.74
VTI1	YMR197C	SLS1	P42900	643 aa		4.21	□□□□□ -1.74
VTI1	YMR197C	SAM37	P50110	327 aa		4.21	□□□□□ -1.74
VTI1	YMR197C	CDA2	Q06703	312 aa		4.21	□□□□□ -1.74
VTI1	YMR197C	TSA1	P34760	196 aa	Known RBP	4.2	□□□□□ -1.74
VTI1	YMR197C	CIC1	P38779	376 aa	Known RBP	4.2	□□□□□ -1.74
VTI1	YMR197C	PTC7	P38797	343 aa		4.2	□□□□□ -1.74
VTI1	YMR197C	SHU2	P38957	223 aa		4.2	□□□□□ -1.74
VTI1	YMR197C	ORC3	P54790	616 aa		4.2	□□□□□ -1.74
VTI1	YMR197C	LPX1	Q12405	387 aa	Known RBP	4.2	□□□□□ -1.74
VTI1	YMR197C	NEM1	P38757	446 aa		4.19	□□□□□ -1.74
VTI1	YMR197C	TPP1	Q03796	238 aa		4.19	□□□□□ -1.74
VTI1	YMR197C	YCS4	Q06156	1176 aa		4.19	□□□□□ -1.74
VTI1	YMR197C	PUS7	Q08647	676 aa	Known RBP	4.19	□□□□□ -1.74
VTI1	YMR197C	YAR028W	P39548	234 aa		4.18	□□□□□ -1.74
VTI1	YMR197C	GTS1	P40956	396 aa		4.18	□□□□□ -1.74
VTI1	YMR197C	MTR4	P47047	1073 aa	Known RBP	4.18	□□□□□ -1.74
VTI1	YMR197C	YKL222C	P35995	705 aa		4.17	□□□□□ -1.74
VTI1	YMR197C	NMD3	P38861	518 aa	Known RBP	4.17	□□□□□ -1.74
VTI1	YMR197C	NOG1	Q02892	647 aa	Known RBP	4.17	□□□□□ -1.74
VTI1	YMR197C	MSH3	P25336	1018 aa		4.16	□□□□□ -1.74
VTI1	YMR197C	YCR015C	P25616	317 aa		4.16	□□□□□ -1.74
VTI1	YMR197C	UGA4	P32837	571 aa		4.16	□□□□□ -1.74
VTI1	YMR197C	YHL050C	P38721	697 aa		4.16	□□□□□ -1.74
VTI1	YMR197C	YHR219W	P38900	624 aa		4.16	□□□□□ -1.74
VTI1	YMR197C	PEX13	P80667	386 aa		4.16	□□□□□ -1.74
VTI1	YMR197C	UTP5	Q04177	643 aa	Known RBP	4.16	□□□□□ -1.74
VTI1	YMR197C	YLR257W	Q06146	321 aa	Known RBP	4.16	□□□□□ -1.74
VTI1	YMR197C	ESC8	Q08119	714 aa		4.16	□□□□□ -1.74
VTI1	YMR197C	RET1	P22276	1149 aa	Known RBP	4.15	□□□□□ -1.75
VTI1	YMR197C	PRP40	P33203	583 aa	Known RBP	4.15	□□□□□ -1.75
VTI1	YMR197C	YHL012W	P38709	493 aa		4.15	□□□□□ -1.75
VTI1	YMR197C	XKS1	P42826	600 aa		4.15	□□□□□ -1.75
VTI1	YMR197C	RSM26	P47141	266 aa		4.15	□□□□□ -1.75
VTI1	YMR197C	THI80	P35202	319 aa		4.14	□□□□□ -1.75
VTI1	YMR197C	ATG14	P38270	344 aa		4.14	□□□□□ -1.75
VTI1	YMR197C	HSE1	P38753	452 aa		4.14	□□□□□ -1.75
VTI1	YMR197C	YNR063W	P53749	607 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 39.1 ms