RNA–Protein interactions for RNA: YMR022W

UBC7, Transcript of Ubiquitin conjugating enzyme, yeast

Gene UBC7, Length 498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC7	YMR022W	MSH6	Q03834	1242 aa		4.27	□□□□□ -1.73
UBC7	YMR022W	INP54	Q08227	384 aa	Known RBP	4.27	□□□□□ -1.73
UBC7	YMR022W	FLP1	P03870	423 aa		4.26	□□□□□ -1.73
UBC7	YMR022W	MAG2	Q06436	670 aa	Known RBP	4.26	□□□□□ -1.73
UBC7	YMR022W	CMR1	Q12510	522 aa	Known RBP	4.26	□□□□□ -1.73
UBC7	YMR022W	KAR2	P16474	682 aa	Known RBP	4.25	□□□□□ -1.73
UBC7	YMR022W	RIM11	P38615	370 aa		4.25	□□□□□ -1.73
UBC7	YMR022W	HSE1	P38753	452 aa		4.25	□□□□□ -1.73
UBC7	YMR022W	ERP5	P38819	212 aa		4.25	□□□□□ -1.73
UBC7	YMR022W	NUT1	P53114	1132 aa		4.25	□□□□□ -1.73
UBC7	YMR022W	OXR1	Q08952	273 aa		4.25	□□□□□ -1.73
UBC7	YMR022W	TRL1	P09880	827 aa	Known RBP	4.24	□□□□□ -1.73
UBC7	YMR022W	RPS4A	P0CX35	261 aa	Known RBP	4.24	□□□□□ -1.73
UBC7	YMR022W	RPS4B	P0CX36	261 aa	Known RBP	4.24	□□□□□ -1.73
UBC7	YMR022W	PRP5	P21372	849 aa	Predicted RBP	4.24	□□□□□ -1.73
UBC7	YMR022W	WHI3	P34761	661 aa	Known RBP	4.24	□□□□□ -1.73
UBC7	YMR022W	NNK1	P36003	928 aa		4.24	□□□□□ -1.73
UBC7	YMR022W	MTR4	P47047	1073 aa	Known RBP	4.24	□□□□□ -1.73
UBC7	YMR022W	YAF9	P53930	226 aa		4.24	□□□□□ -1.73
UBC7	YMR022W	YCS4	Q06156	1176 aa		4.24	□□□□□ -1.73
UBC7	YMR022W	LAP2	Q10740	671 aa		4.24	□□□□□ -1.73
UBC7	YMR022W	ADP1	P25371	1049 aa		4.23	□□□□□ -1.73
UBC7	YMR022W	STM1	P39015	273 aa	Known RBP	4.23	□□□□□ -1.73
UBC7	YMR022W	ECL1	P48235	211 aa		4.23	□□□□□ -1.73
UBC7	YMR022W	AOS1	Q06624	347 aa		4.23	□□□□□ -1.73
UBC7	YMR022W	NFS1	P25374	497 aa		4.22	□□□□□ -1.73
UBC7	YMR022W	SMY2	P32909	740 aa	Known RBP	4.22	□□□□□ -1.73
UBC7	YMR022W	SQT1	P35184	431 aa		4.22	□□□□□ -1.73
UBC7	YMR022W	MDJ2	P42834	146 aa		4.22	□□□□□ -1.73
UBC7	YMR022W	MON1	P53129	644 aa		4.22	□□□□□ -1.73
UBC7	YMR022W	PRP43	P53131	767 aa	Known RBP	4.22	□□□□□ -1.73
UBC7	YMR022W	SDH1	Q00711	640 aa		4.22	□□□□□ -1.73
UBC7	YMR022W	NUT2	Q06213	157 aa		4.22	□□□□□ -1.73
UBC7	YMR022W	ALG6	Q12001	544 aa	Known RBP	4.22	□□□□□ -1.73
UBC7	YMR022W	COB	P00163	385 aa		4.21	□□□□□ -1.74
UBC7	YMR022W	SLD2	P34252	453 aa		4.21	□□□□□ -1.74
UBC7	YMR022W	MSH4	P40965	878 aa	Predicted RBP	4.21	□□□□□ -1.74
UBC7	YMR022W	THI12	P42883	340 aa		4.21	□□□□□ -1.74
UBC7	YMR022W	THI5	P43534	340 aa		4.21	□□□□□ -1.74
UBC7	YMR022W	SAP155	P43612	1002 aa		4.21	□□□□□ -1.74
UBC7	YMR022W	RSM26	P47141	266 aa		4.21	□□□□□ -1.74
UBC7	YMR022W	THI11	P47183	340 aa		4.21	□□□□□ -1.74
UBC7	YMR022W	CTH1	P47976	325 aa		4.21	□□□□□ -1.74
UBC7	YMR022W	FOL2	P51601	243 aa	Known RBP	4.21	□□□□□ -1.74
UBC7	YMR022W	THI13	Q07748	340 aa		4.21	□□□□□ -1.74
UBC7	YMR022W	MNL2	Q12205	849 aa		4.21	□□□□□ -1.74
UBC7	YMR022W	VPS35	P34110	944 aa		4.2	□□□□□ -1.74
UBC7	YMR022W	POL12	P38121	705 aa	Predicted RBP	4.2	□□□□□ -1.74
UBC7	YMR022W	YHL050C	P38721	697 aa		4.2	□□□□□ -1.74
UBC7	YMR022W	YHR219W	P38900	624 aa		4.2	□□□□□ -1.74
UBC7	YMR022W	ALT1	P52893	592 aa		4.2	□□□□□ -1.74
UBC7	YMR022W	ELA1	P53861	379 aa	Predicted RBP	4.2	□□□□□ -1.74
UBC7	YMR022W	TRE1	Q08919	783 aa		4.2	□□□□□ -1.74
UBC7	YMR022W	SEC20	P28791	383 aa		4.19	□□□□□ -1.74
UBC7	YMR022W	ELM1	P32801	640 aa		4.19	□□□□□ -1.74
UBC7	YMR022W	HRK1	Q08732	759 aa	Known RBP	4.19	□□□□□ -1.74
UBC7	YMR022W	GCD1	P09032	578 aa	Predicted RBP	4.18	□□□□□ -1.74
UBC7	YMR022W	YAR028W	P39548	234 aa		4.18	□□□□□ -1.74
UBC7	YMR022W	YGR045C	P53229	120 aa		4.18	□□□□□ -1.74
UBC7	YMR022W	PEX13	P80667	386 aa		4.18	□□□□□ -1.74
UBC7	YMR022W	DFG16	Q99234	619 aa		4.18	□□□□□ -1.74
UBC7	YMR022W	FRT1	Q99332	602 aa		4.18	□□□□□ -1.74
UBC7	YMR022W	VMA4	P22203	233 aa	Known RBP	4.17	□□□□□ -1.74
UBC7	YMR022W	PRO1	P32264	428 aa		4.17	□□□□□ -1.74
UBC7	YMR022W	HSP78	P33416	811 aa		4.17	□□□□□ -1.74
UBC7	YMR022W	NIT1	P40447	199 aa		4.17	□□□□□ -1.74
UBC7	YMR022W	DUR3	P33413	735 aa		4.16	□□□□□ -1.74
UBC7	YMR022W	PPX1	P38698	397 aa		4.16	□□□□□ -1.74
UBC7	YMR022W	UBP5	P39944	805 aa		4.16	□□□□□ -1.74
UBC7	YMR022W	OYE3	P41816	400 aa	Predicted RBP	4.16	□□□□□ -1.74
UBC7	YMR022W	TPP1	Q03796	238 aa		4.16	□□□□□ -1.74
UBC7	YMR022W	NBA1	Q08229	501 aa	Known RBP	4.16	□□□□□ -1.74
UBC7	YMR022W	YVC1	Q12324	675 aa		4.16	□□□□□ -1.74
UBC7	YMR022W	MSH3	P25336	1018 aa		4.15	□□□□□ -1.75
UBC7	YMR022W	PRP40	P33203	583 aa	Known RBP	4.15	□□□□□ -1.75
UBC7	YMR022W	EXO5	P38289	585 aa		4.15	□□□□□ -1.75
UBC7	YMR022W	SSF1	P38789	453 aa	Predicted RBP	4.15	□□□□□ -1.75
UBC7	YMR022W	NOG1	Q02892	647 aa	Known RBP	4.15	□□□□□ -1.75
UBC7	YMR022W	SSY1	Q03770	852 aa		4.15	□□□□□ -1.75
UBC7	YMR022W	DAL4	Q04895	635 aa		4.15	□□□□□ -1.75
UBC7	YMR022W	YOR352W	Q08816	343 aa		4.15	□□□□□ -1.75
UBC7	YMR022W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
UBC7	YMR022W	GAS1	P22146	559 aa	Known RBP	4.14	□□□□□ -1.75
UBC7	YMR022W	RET1	P22276	1149 aa	Known RBP	4.14	□□□□□ -1.75
UBC7	YMR022W	SEG2	P34250	1132 aa		4.14	□□□□□ -1.75
UBC7	YMR022W	YHL012W	P38709	493 aa		4.14	□□□□□ -1.75
UBC7	YMR022W	VPS53	P47061	822 aa		4.14	□□□□□ -1.75
UBC7	YMR022W	GPI13	Q07830	1017 aa		4.14	□□□□□ -1.75
UBC7	YMR022W	PUS7	Q08647	676 aa	Known RBP	4.14	□□□□□ -1.75
UBC7	YMR022W	MSC6	Q08818	692 aa	Known RBP	4.14	□□□□□ -1.75
UBC7	YMR022W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.13	□□□□□ -1.75
UBC7	YMR022W	TY1A-DR6	P0CX70	440 aa		4.13	□□□□□ -1.75
UBC7	YMR022W	TY1A-ER1	P0CX71	440 aa		4.13	□□□□□ -1.75
UBC7	YMR022W	TY1A-LR2	P0CX72	440 aa		4.13	□□□□□ -1.75
UBC7	YMR022W	TY1A-PL	P0CX73	440 aa		4.13	□□□□□ -1.75
UBC7	YMR022W	TY1A-JR1	P0CX74	440 aa		4.13	□□□□□ -1.75
UBC7	YMR022W	TY1A-LR3	P0CX75	440 aa		4.13	□□□□□ -1.75
UBC7	YMR022W	TY1A-ML2	P0CX76	440 aa		4.13	□□□□□ -1.75
UBC7	YMR022W	PTC7	P38797	343 aa		4.13	□□□□□ -1.75
UBC7	YMR022W	XKS1	P42826	600 aa		4.13	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms