RNA–Protein interactions for RNA: YLR340W

RPP0, Transcript of Conserved ribosomal protein P0 of the ribosomal stalk, yeastyeast

Gene RPP0, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPP0YLR340W YEL077CQ3E7X8 1277 aa5.78□□□□□ -1.48
RPP0YLR340W SNF3P10870 884 aa5.77□□□□□ -1.49
RPP0YLR340W UIP5P36137 443 aa5.77□□□□□ -1.49
RPP0YLR340W DMA1P38823 416 aa5.77□□□□□ -1.49
RPP0YLR340W UBP12P39538 1254 aa5.77□□□□□ -1.49
RPP0YLR340W MPP10P47083 593 aaKnown RBP5.77□□□□□ -1.49
RPP0YLR340W YGR122WP53272 402 aa5.77□□□□□ -1.49
RPP0YLR340W HEF3P53978 1044 aaKnown RBP5.77□□□□□ -1.49
RPP0YLR340W SRS2P12954 1174 aa5.76□□□□□ -1.49
RPP0YLR340W SWC3P31376 625 aa5.76□□□□□ -1.49
RPP0YLR340W VAB2P40003 282 aa5.76□□□□□ -1.49
RPP0YLR340W AIM21P40563 679 aa5.76□□□□□ -1.49
RPP0YLR340W LYS14P40971 790 aa5.76□□□□□ -1.49
RPP0YLR340W FMP30Q02883 468 aa5.76□□□□□ -1.49
RPP0YLR340W AHC1Q12433 566 aa5.76□□□□□ -1.49
RPP0YLR340W YDR034W-BQ6Q5X2 51 aa5.76□□□□□ -1.49
RPP0YLR340W TUB2P02557 457 aaKnown RBP5.75□□□□□ -1.49
RPP0YLR340W SEC2P17065 759 aa5.75□□□□□ -1.49
RPP0YLR340W YBL028CP38202 106 aa5.75□□□□□ -1.49
RPP0YLR340W AFG3P39925 761 aa5.75□□□□□ -1.49
RPP0YLR340W YJL007CP47080 104 aa5.75□□□□□ -1.49
RPP0YLR340W BRE5P53741 515 aaKnown RBP5.75□□□□□ -1.49
RPP0YLR340W NSG2P53898 299 aa5.75□□□□□ -1.49
RPP0YLR340W SUT2Q12286 268 aa5.75□□□□□ -1.49
RPP0YLR340W MDM20Q12387 796 aaKnown RBP5.75□□□□□ -1.49
RPP0YLR340W TY1A-DR4O74302 440 aa5.74□□□□□ -1.49
RPP0YLR340W ERG12P07277 443 aa5.74□□□□□ -1.49
RPP0YLR340W TY1A-HP0C2I4 478 aaKnown RBP5.74□□□□□ -1.49
RPP0YLR340W TY1A-AP0CX57 440 aa5.74□□□□□ -1.49
RPP0YLR340W TY1A-PR1P0CX58 440 aa5.74□□□□□ -1.49
RPP0YLR340W TY1A-ORP0CX59 440 aa5.74□□□□□ -1.49
RPP0YLR340W TY1A-PR2P0CX60 440 aa5.74□□□□□ -1.49
RPP0YLR340W TY1A-DR5P0CX65 440 aa5.74□□□□□ -1.49
RPP0YLR340W TY1A-ER2P0CX66 440 aa5.74□□□□□ -1.49
RPP0YLR340W TY1A-GR3P0CX67 440 aa5.74□□□□□ -1.49
RPP0YLR340W TY1A-LR1P0CX68 440 aa5.74□□□□□ -1.49
RPP0YLR340W TY1A-MR2P0CX69 440 aa5.74□□□□□ -1.49
RPP0YLR340W KIN1P13185 1064 aa5.74□□□□□ -1.49
RPP0YLR340W DIT2P21595 489 aa5.74□□□□□ -1.49
RPP0YLR340W TPD3P31383 635 aa5.74□□□□□ -1.49
RPP0YLR340W PTK1P36002 662 aaPredicted RBP5.74□□□□□ -1.49
RPP0YLR340W GLO3P38682 493 aaKnown RBP5.74□□□□□ -1.49
RPP0YLR340W MXR1P40029 184 aa5.74□□□□□ -1.49
RPP0YLR340W YIR042CP40586 236 aa5.74□□□□□ -1.49
RPP0YLR340W TY1A-JR2P47099 440 aa5.74□□□□□ -1.49
RPP0YLR340W TY1A-DR1Q03856 440 aa5.74□□□□□ -1.49
RPP0YLR340W TY1A-ML1Q04706 440 aaKnown RBP5.74□□□□□ -1.49
RPP0YLR340W TY1A-BRQ12217 440 aa5.74□□□□□ -1.49
RPP0YLR340W TY1A-NL2Q12470 440 aa5.74□□□□□ -1.49
RPP0YLR340W TY1A-GR2Q12485 440 aa5.74□□□□□ -1.49
RPP0YLR340W TUS1Q06412 1307 aa5.74□□□□□ -1.49
RPP0YLR340W HIP1P06775 603 aa5.73□□□□□ -1.49
RPP0YLR340W RAD24P32641 659 aa5.73□□□□□ -1.49
RPP0YLR340W MDL2P33311 773 aa5.73□□□□□ -1.49
RPP0YLR340W INM2Q05533 292 aa5.73□□□□□ -1.49
RPP0YLR340W PCL8Q08966 492 aa5.73□□□□□ -1.49
RPP0YLR340W MAM3Q12296 706 aa5.73□□□□□ -1.49
RPP0YLR340W NUM1Q00402 2748 aa5.73□□□□□ -1.49
RPP0YLR340W PRE10P21242 288 aaKnown RBP RIP-Chip data5.72□□□□□ -1.49not detected
RPP0YLR340W SPT16P32558 1035 aaKnown RBP5.72□□□□□ -1.49
RPP0YLR340W MSC7P38694 644 aa5.72□□□□□ -1.49
RPP0YLR340W MSH4P40965 878 aaPredicted RBP5.72□□□□□ -1.49
RPP0YLR340W NOP2P40991 618 aaKnown RBP5.72□□□□□ -1.49
RPP0YLR340W YJR107WP47145 328 aa5.72□□□□□ -1.49
RPP0YLR340W SUB2Q07478 446 aaKnown RBP5.72□□□□□ -1.49
RPP0YLR340W NOP8Q08287 484 aaPredicted RBP5.72□□□□□ -1.49
RPP0YLR340W MET7Q08645 548 aa5.72□□□□□ -1.49
RPP0YLR340W SEC18P18759 758 aaKnown RBP5.71□□□□□ -1.5
RPP0YLR340W PKC1P24583 1151 aa5.71□□□□□ -1.5
RPP0YLR340W SPB4P25808 606 aaPredicted RBP5.71□□□□□ -1.5
RPP0YLR340W PSE1P32337 1089 aaKnown RBP5.71□□□□□ -1.5
RPP0YLR340W EUG1P32474 517 aa5.71□□□□□ -1.5
RPP0YLR340W BOI2P39969 1040 aa5.71□□□□□ -1.5
RPP0YLR340W SNU71P53207 620 aaKnown RBP5.71□□□□□ -1.5
RPP0YLR340W PER1P25625 357 aa5.7□□□□□ -1.5
RPP0YLR340W BCS1P32839 456 aa5.7□□□□□ -1.5
RPP0YLR340W KSP1P38691 1029 aaKnown RBP5.7□□□□□ -1.5
RPP0YLR340W HAL5P38970 855 aaKnown RBP5.7□□□□□ -1.5
RPP0YLR340W UBX5Q06682 500 aa5.7□□□□□ -1.5
RPP0YLR340W YDL124WQ07551 312 aaKnown RBP5.7□□□□□ -1.5
RPP0YLR340W YDL144CQ07589 356 aa5.7□□□□□ -1.5
RPP0YLR340W FAB1P34756 2278 aa5.69□□□□□ -1.5
RPP0YLR340W SLA1P32790 1244 aa5.69□□□□□ -1.5
RPP0YLR340W YHR131CP38835 850 aa5.69□□□□□ -1.5
RPP0YLR340W RRN7P40992 514 aa5.69□□□□□ -1.5
RPP0YLR340W ERF2Q06551 359 aa5.69□□□□□ -1.5
RPP0YLR340W RRI2Q12348 645 aa5.69□□□□□ -1.5
RPP0YLR340W ECM29P38737 1868 aa5.68□□□□□ -1.5
RPP0YLR340W KEX2P13134 814 aa5.68□□□□□ -1.5
RPP0YLR340W KRS1P15180 591 aaKnown RBP5.68□□□□□ -1.5
RPP0YLR340W VMA2P16140 517 aaKnown RBP5.68□□□□□ -1.5
RPP0YLR340W KTR2P33550 425 aa5.68□□□□□ -1.5
RPP0YLR340W DSF2P38213 736 aa5.68□□□□□ -1.5
RPP0YLR340W CST26P38226 397 aa5.68□□□□□ -1.5
RPP0YLR340W TIF4631P39935 952 aaKnown RBP5.68□□□□□ -1.5
RPP0YLR340W PIP2P52960 996 aa5.68□□□□□ -1.5
RPP0YLR340W PIF1P07271 859 aa5.67□□□□□ -1.5
RPP0YLR340W MIP1P15801 1254 aa5.67□□□□□ -1.5
RPP0YLR340W PAT1P25644 796 aaKnown RBP5.67□□□□□ -1.5
RPP0YLR340W RGT1P32862 1170 aa5.67□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 231.1 ms