RNA–Protein interactions for RNA: YLR170C

APS1, Transcript of Small subunit of the clathrin-associated adaptor complex AP-1, yeast

Gene APS1, Length 471 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APS1	YLR170C	NUP42	P49686	430 aa	Known RBP	5.78	□□□□□ -1.48
APS1	YLR170C	IRC3	Q06683	689 aa		5.78	□□□□□ -1.48
APS1	YLR170C	NOP8	Q08287	484 aa	Predicted RBP	5.78	□□□□□ -1.48
APS1	YLR170C	FIG2	P25653	1609 aa		5.77	□□□□□ -1.48
APS1	YLR170C	KRE2	P27809	442 aa		5.77	□□□□□ -1.49
APS1	YLR170C	FRD1	P32614	470 aa	Known RBP	5.77	□□□□□ -1.49
APS1	YLR170C	SPL2	P38839	148 aa		5.77	□□□□□ -1.49
APS1	YLR170C	SPO1	P53541	631 aa		5.77	□□□□□ -1.49
APS1	YLR170C	SHC1	P39000	512 aa		5.76	□□□□□ -1.49
APS1	YLR170C	NUG1	P40010	520 aa	Known RBP	5.76	□□□□□ -1.49
APS1	YLR170C	UBX2	Q04228	584 aa		5.76	□□□□□ -1.49
APS1	YLR170C	GRX6	Q12438	231 aa		5.76	□□□□□ -1.49
APS1	YLR170C	POM152	P39685	1337 aa		5.75	□□□□□ -1.49
APS1	YLR170C	PMD1	P32634	1753 aa		5.75	□□□□□ -1.49
APS1	YLR170C	CDC19	P00549	500 aa	Known RBP	5.75	□□□□□ -1.49
APS1	YLR170C	CDC16	P09798	840 aa		5.75	□□□□□ -1.49
APS1	YLR170C	CAF20	P12962	161 aa	Known RBP	5.75	□□□□□ -1.49
APS1	YLR170C	RET1	P22276	1149 aa	Known RBP	5.75	□□□□□ -1.49
APS1	YLR170C	GLO3	P38682	493 aa	Known RBP	5.75	□□□□□ -1.49
APS1	YLR170C	PUF6	Q04373	656 aa	Known RBP	5.75	□□□□□ -1.49
APS1	YLR170C	AI1	P03875	834 aa		5.74	□□□□□ -1.49
APS1	YLR170C	YKU70	P32807	602 aa		5.74	□□□□□ -1.49
APS1	YLR170C	RPN1	P38764	993 aa	Known RBP	5.74	□□□□□ -1.49
APS1	YLR170C	FUN12	P39730	1002 aa	Known RBP	5.74	□□□□□ -1.49
APS1	YLR170C	EMW1	P42842	904 aa	Known RBP	5.74	□□□□□ -1.49
APS1	YLR170C	SEC18	P18759	758 aa	Known RBP	5.73	□□□□□ -1.49
APS1	YLR170C	LCB1	P25045	558 aa	Known RBP	5.73	□□□□□ -1.49
APS1	YLR170C	MGM1	P32266	881 aa		5.73	□□□□□ -1.49
APS1	YLR170C	THI3	Q07471	609 aa		5.73	□□□□□ -1.49
APS1	YLR170C	SNU66	Q12420	587 aa	Predicted RBP	5.73	□□□□□ -1.49
APS1	YLR170C	ICL1	P28240	557 aa	Predicted RBP	5.72	□□□□□ -1.49
APS1	YLR170C	DSF2	P38213	736 aa		5.72	□□□□□ -1.49
APS1	YLR170C	HKR1	P41809	1802 aa		5.71	□□□□□ -1.49
APS1	YLR170C	NOT3	P06102	836 aa	Known RBP	5.71	□□□□□ -1.5
APS1	YLR170C	PIF1	P07271	859 aa		5.71	□□□□□ -1.5
APS1	YLR170C	SBP1	P10080	294 aa	Known RBP	5.71	□□□□□ -1.5
APS1	YLR170C	DIT2	P21595	489 aa		5.71	□□□□□ -1.5
APS1	YLR170C	NGR1	P32831	672 aa	Known RBP	5.71	□□□□□ -1.5
APS1	YLR170C	KTR3	P38130	404 aa	Predicted RBP	5.71	□□□□□ -1.5
APS1	YLR170C	HAL5	P38970	855 aa	Known RBP	5.71	□□□□□ -1.5
APS1	YLR170C	YGL242C	P53066	181 aa		5.71	□□□□□ -1.5
APS1	YLR170C	HST2	P53686	357 aa		5.71	□□□□□ -1.5
APS1	YLR170C	DFG5	Q05031	458 aa		5.71	□□□□□ -1.5
APS1	YLR170C	ATG20	Q07528	640 aa		5.71	□□□□□ -1.5
APS1	YLR170C	PSF3	Q12146	194 aa		5.71	□□□□□ -1.5
APS1	YLR170C	YPR053C	Q6Q5F3	151 aa		5.71	□□□□□ -1.5
APS1	YLR170C	RPT4	P53549	437 aa	Known RBP	5.7	□□□□□ -1.5
APS1	YLR170C	CUZ1	P53899	274 aa		5.7	□□□□□ -1.5
APS1	YLR170C	ECM16	Q04217	1267 aa	Known RBP	5.7	□□□□□ -1.5
APS1	YLR170C	GAS5	Q08193	484 aa		5.7	□□□□□ -1.5
APS1	YLR170C	NCB2	Q92317	146 aa		5.7	□□□□□ -1.5
APS1	YLR170C	YLR278C	Q05854	1341 aa		5.7	□□□□□ -1.5
APS1	YLR170C	ECM21	P38167	1117 aa	Known RBP	5.69	□□□□□ -1.5
APS1	YLR170C	NMD2	P38798	1089 aa	Known RBP	5.69	□□□□□ -1.5
APS1	YLR170C	ALO1	P54783	526 aa	Known RBP	5.69	□□□□□ -1.5
APS1	YLR170C	IRC4	Q03036	179 aa		5.69	□□□□□ -1.5
APS1	YLR170C	WRS1	Q12109	432 aa	Known RBP	5.69	□□□□□ -1.5
APS1	YLR170C	FAS2	P19097	1887 aa	Known RBP	5.68	□□□□□ -1.5
APS1	YLR170C	CYB2	P00175	591 aa		5.68	□□□□□ -1.5
APS1	YLR170C	ESS1	P22696	170 aa		5.68	□□□□□ -1.5
APS1	YLR170C	GEF1	P37020	779 aa		5.68	□□□□□ -1.5
APS1	YLR170C	FPR3	P38911	411 aa	Known RBP	5.68	□□□□□ -1.5
APS1	YLR170C	MLC1	P53141	149 aa		5.68	□□□□□ -1.5
APS1	YLR170C	YNL193W	P53870	558 aa		5.68	□□□□□ -1.5
APS1	YLR170C	PRP42	Q03776	544 aa	Known RBP	5.68	□□□□□ -1.5
APS1	YLR170C	RPN7	Q06103	429 aa	Known RBP	5.68	□□□□□ -1.5
APS1	YLR170C	MMP1	Q12372	583 aa		5.68	□□□□□ -1.5
APS1	YLR170C	DUR1,2	P32528	1835 aa	Known RBP	5.68	□□□□□ -1.5
APS1	YLR170C	RAD50	P12753	1312 aa		5.68	□□□□□ -1.5
APS1	YLR170C	FLO11	P08640	1367 aa		5.67	□□□□□ -1.5
APS1	YLR170C	SNF3	P10870	884 aa		5.67	□□□□□ -1.5
APS1	YLR170C	RTG2	P32608	588 aa	Known RBP	5.67	□□□□□ -1.5
APS1	YLR170C	GLC3	P32775	704 aa		5.67	□□□□□ -1.5
APS1	YLR170C	MKS1	P34072	584 aa		5.67	□□□□□ -1.5
APS1	YLR170C	SBE2	P42223	864 aa	Known RBP	5.67	□□□□□ -1.5
APS1	YLR170C	SQS1	P53866	767 aa	Known RBP	5.67	□□□□□ -1.5
APS1	YLR170C	MSM1	P22438	575 aa		5.66	□□□□□ -1.5
APS1	YLR170C	UTP7	P40055	554 aa	Known RBP	5.66	□□□□□ -1.5
APS1	YLR170C	YFH7	P43591	353 aa		5.66	□□□□□ -1.5
APS1	YLR170C	MRPS35	P53292	345 aa		5.66	□□□□□ -1.5
APS1	YLR170C	NKP2	Q06162	153 aa		5.66	□□□□□ -1.5
APS1	YLR170C	TOS4	Q06266	489 aa		5.66	□□□□□ -1.5
APS1	YLR170C	ACK1	Q07622	623 aa	Predicted RBP	5.66	□□□□□ -1.5
APS1	YLR170C	RRG1	Q12167	365 aa	Predicted RBP	5.66	□□□□□ -1.5
APS1	YLR170C	TOP1	P04786	769 aa		5.65	□□□□□ -1.5
APS1	YLR170C	YJU3	P28321	313 aa		5.65	□□□□□ -1.5
APS1	YLR170C	SLA1	P32790	1244 aa		5.65	□□□□□ -1.5
APS1	YLR170C	OSH3	P38713	996 aa	Known RBP	5.65	□□□□□ -1.5
APS1	YLR170C	YGR117C	P53270	476 aa		5.65	□□□□□ -1.5
APS1	YLR170C	PKH3	Q03306	898 aa	Predicted RBP	5.65	□□□□□ -1.5
APS1	YLR170C	CRF1	Q04930	467 aa		5.65	□□□□□ -1.5
APS1	YLR170C	TDA6	Q06466	467 aa		5.65	□□□□□ -1.5
APS1	YLR170C	BRE1	Q07457	700 aa	Known RBP	5.65	□□□□□ -1.5
APS1	YLR170C	PDR18	P53756	1333 aa		5.65	□□□□□ -1.51
APS1	YLR170C	AFG2	P32794	780 aa		5.64	□□□□□ -1.51
APS1	YLR170C	RFC1	P38630	861 aa	Known RBP	5.64	□□□□□ -1.51
APS1	YLR170C	SKN7	P38889	622 aa		5.64	□□□□□ -1.51
APS1	YLR170C	CEM1	P39525	442 aa		5.64	□□□□□ -1.51
APS1	YLR170C	JJJ2	P46997	583 aa		5.64	□□□□□ -1.51
APS1	YLR170C	MTC3	P53077	123 aa		5.64	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 49.9 ms