RNA–Protein interactions for RNA: YLR160C

ASP3-4, Transcript of Cell-wall L-asparaginase II involved in asparagine catabolism, yeast

Gene ASP3-4, Length 1,089 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ASP3-4	YLR160C	SHC1	P39000	512 aa		10.12	□□□□□ -0.79
ASP3-4	YLR160C	VID27	P40157	782 aa		10.12	□□□□□ -0.79
ASP3-4	YLR160C	MSH4	P40965	878 aa	Predicted RBP	10.12	□□□□□ -0.79
ASP3-4	YLR160C	HDA1	P53973	706 aa		10.12	□□□□□ -0.79
ASP3-4	YLR160C	YPR148C	Q06523	435 aa		10.12	□□□□□ -0.79
ASP3-4	YLR160C	TAF13	P11747	167 aa		10.11	□□□□□ -0.79
ASP3-4	YLR160C	HCA4	P20448	770 aa	Known RBP	10.11	□□□□□ -0.79
ASP3-4	YLR160C	SWI4	P25302	1093 aa	Known RBP	10.11	□□□□□ -0.79
ASP3-4	YLR160C	RPS7A	P26786	190 aa	Known RBP	10.11	□□□□□ -0.79
ASP3-4	YLR160C	RFT1	P38206	574 aa	Predicted RBP	10.11	□□□□□ -0.79
ASP3-4	YLR160C	PTK2	P47116	818 aa	Known RBP	10.11	□□□□□ -0.79
ASP3-4	YLR160C	RIT1	P23796	513 aa		10.1	□□□□□ -0.79
ASP3-4	YLR160C	FPK1	P53739	893 aa		10.1	□□□□□ -0.79
ASP3-4	YLR160C	NSG2	P53898	299 aa		10.1	□□□□□ -0.79
ASP3-4	YLR160C	GDE1	Q02979	1223 aa		10.1	□□□□□ -0.79
ASP3-4	YLR160C	MYO5	Q04439	1219 aa	Known RBP	10.1	□□□□□ -0.79
ASP3-4	YLR160C	CRF1	Q04930	467 aa		10.1	□□□□□ -0.79
ASP3-4	YLR160C	KEL3	Q08979	651 aa	Predicted RBP	10.1	□□□□□ -0.79
ASP3-4	YLR160C	RNR3	P21672	869 aa	Known RBP	10.09	□□□□□ -0.79
ASP3-4	YLR160C	AFG2	P32794	780 aa		10.09	□□□□□ -0.79
ASP3-4	YLR160C	SQS1	P53866	767 aa	Known RBP	10.09	□□□□□ -0.79
ASP3-4	YLR160C	RXT2	P38255	430 aa		10.08	□□□□□ -0.8
ASP3-4	YLR160C	NPR3	P38742	1146 aa		10.08	□□□□□ -0.8
ASP3-4	YLR160C	VPS8	P39702	1274 aa		10.08	□□□□□ -0.8
ASP3-4	YLR160C	RPT6	Q01939	405 aa	Known RBP	10.08	□□□□□ -0.8
ASP3-4	YLR160C	PCL8	Q08966	492 aa		10.08	□□□□□ -0.8
ASP3-4	YLR160C	CLF1	Q12309	687 aa	Predicted RBP	10.08	□□□□□ -0.8
ASP3-4	YLR160C	CEX1	Q12453	761 aa		10.08	□□□□□ -0.8
ASP3-4	YLR160C	YOR111W	Q99210	232 aa		10.08	□□□□□ -0.8
ASP3-4	YLR160C	FLO11	P08640	1367 aa		10.07	□□□□□ -0.8
ASP3-4	YLR160C	TOP1	P04786	769 aa		10.07	□□□□□ -0.8
ASP3-4	YLR160C	PES4	P39684	611 aa		10.07	□□□□□ -0.8
ASP3-4	YLR160C	CSM2	P40465	213 aa		10.07	□□□□□ -0.8
ASP3-4	YLR160C	YPT11	P48559	417 aa		10.07	□□□□□ -0.8
ASP3-4	YLR160C	DCS2	Q12123	353 aa		10.07	□□□□□ -0.8
ASP3-4	YLR160C	HXK1	P04806	485 aa	Known RBP	10.06	□□□□□ -0.8
ASP3-4	YLR160C	PRO3	P32263	286 aa	Known RBP	10.06	□□□□□ -0.8
ASP3-4	YLR160C	YKT6	P36015	200 aa	Known RBP	10.06	□□□□□ -0.8
ASP3-4	YLR160C	YJL171C	P46992	396 aa		10.06	□□□□□ -0.8
ASP3-4	YLR160C	GET3	Q12154	354 aa	Known RBP	10.06	□□□□□ -0.8
ASP3-4	YLR160C	RPL22A	P05749	121 aa	Known RBP	10.05	□□□□□ -0.8
ASP3-4	YLR160C	GPA1	P08539	472 aa		10.05	□□□□□ -0.8
ASP3-4	YLR160C	CDC6	P09119	513 aa		10.05	□□□□□ -0.8
ASP3-4	YLR160C	RGP1	P16664	663 aa		10.05	□□□□□ -0.8
ASP3-4	YLR160C	MSM1	P22438	575 aa		10.05	□□□□□ -0.8
ASP3-4	YLR160C	PRE8	P23639	250 aa		10.05	□□□□□ -0.8
ASP3-4	YLR160C	RPL8B	P29453	256 aa	Known RBP	10.05	□□□□□ -0.8
ASP3-4	YLR160C	MIC60	P36112	540 aa		10.05	□□□□□ -0.8
ASP3-4	YLR160C	PCI8	P40512	444 aa		10.05	□□□□□ -0.8
ASP3-4	YLR160C	TRS33	Q99394	268 aa		10.05	□□□□□ -0.8
ASP3-4	YLR160C	SRM1	P21827	482 aa		10.04	□□□□□ -0.8
ASP3-4	YLR160C	MRPL10	P36520	322 aa		10.04	□□□□□ -0.8
ASP3-4	YLR160C	TOM71	P38825	639 aa	Known RBP	10.04	□□□□□ -0.8
ASP3-4	YLR160C	YER130C	P39959	443 aa		10.04	□□□□□ -0.8
ASP3-4	YLR160C	NAF1	P53919	492 aa	Known RBP	10.04	□□□□□ -0.8
ASP3-4	YLR160C	SEN54	Q02825	467 aa	Predicted RBP	10.04	□□□□□ -0.8
ASP3-4	YLR160C	YDR341C	Q05506	607 aa	Known RBP	10.04	□□□□□ -0.8
ASP3-4	YLR160C	SGD1	Q06132	899 aa		10.04	□□□□□ -0.8
ASP3-4	YLR160C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	10.04	□□□□□ -0.8	not detected
ASP3-4	YLR160C	NBL1	Q3E7Y6	73 aa		10.04	□□□□□ -0.8
ASP3-4	YLR160C	RRM3	P38766	723 aa		10.03	□□□□□ -0.8
ASP3-4	YLR160C	SKG3	Q06315	1026 aa		10.03	□□□□□ -0.8
ASP3-4	YLR160C	ATG20	Q07528	640 aa		10.03	□□□□□ -0.8
ASP3-4	YLR160C	MET6	P05694	767 aa	Known RBP	10.02	□□□□□ -0.81
ASP3-4	YLR160C	ATE1	P16639	503 aa		10.02	□□□□□ -0.81
ASP3-4	YLR160C	VPS1	P21576	704 aa	Known RBP	10.02	□□□□□ -0.81
ASP3-4	YLR160C	MCM3	P24279	971 aa	Known RBP	10.02	□□□□□ -0.81
ASP3-4	YLR160C	CUE3	P53137	624 aa	Known RBP	10.02	□□□□□ -0.81
ASP3-4	YLR160C	FOL1	P53848	824 aa		10.02	□□□□□ -0.81
ASP3-4	YLR160C	CSC1	Q06538	782 aa		10.02	□□□□□ -0.81
ASP3-4	YLR160C	CIT1	P00890	479 aa		10.01	□□□□□ -0.81
ASP3-4	YLR160C	URA1	P28272	314 aa	Predicted RBP	10.01	□□□□□ -0.81
ASP3-4	YLR160C	MPE1	P35728	441 aa	Known RBP	10.01	□□□□□ -0.81
ASP3-4	YLR160C	EBP2	P36049	427 aa	Known RBP	10.01	□□□□□ -0.81
ASP3-4	YLR160C	SLI15	P38283	698 aa		10.01	□□□□□ -0.81
ASP3-4	YLR160C	MTC3	P53077	123 aa		10.01	□□□□□ -0.81
ASP3-4	YLR160C	YGL138C	P53122	345 aa		10.01	□□□□□ -0.81
ASP3-4	YLR160C	SNU71	P53207	620 aa	Known RBP	10.01	□□□□□ -0.81
ASP3-4	YLR160C	RTC4	P53850	401 aa		10.01	□□□□□ -0.81
ASP3-4	YLR160C	VPS30	Q02948	557 aa		10.01	□□□□□ -0.81
ASP3-4	YLR160C	DSE3	Q08729	430 aa		10.01	□□□□□ -0.81
ASP3-4	YLR160C	TIP41	Q12199	356 aa		10.01	□□□□□ -0.81
ASP3-4	YLR160C	NUC1	P08466	329 aa		10	□□□□□ -0.81
ASP3-4	YLR160C	KIN1	P13185	1064 aa		10	□□□□□ -0.81
ASP3-4	YLR160C	ADP1	P25371	1049 aa		10	□□□□□ -0.81
ASP3-4	YLR160C	MCM4	P30665	933 aa	Known RBP	10	□□□□□ -0.81
ASP3-4	YLR160C	UTP7	P40055	554 aa	Known RBP	10	□□□□□ -0.81
ASP3-4	YLR160C	MDM1	Q01846	1127 aa		10	□□□□□ -0.81
ASP3-4	YLR160C	YDL124W	Q07551	312 aa	Known RBP	10	□□□□□ -0.81
ASP3-4	YLR160C	ALG1	P16661	449 aa		9.99	□□□□□ -0.81
ASP3-4	YLR160C	SRP54	P20424	541 aa	Known RBP	9.99	□□□□□ -0.81
ASP3-4	YLR160C	ACE2	P21192	770 aa		9.99	□□□□□ -0.81
ASP3-4	YLR160C	GSY2	P27472	705 aa		9.99	□□□□□ -0.81
ASP3-4	YLR160C	SEC20	P28791	383 aa		9.99	□□□□□ -0.81
ASP3-4	YLR160C	BMH1	P29311	267 aa	Known RBP	9.99	□□□□□ -0.81
ASP3-4	YLR160C	CHS3	P29465	1165 aa		9.99	□□□□□ -0.81
ASP3-4	YLR160C	CST26	P38226	397 aa		9.99	□□□□□ -0.81
ASP3-4	YLR160C	CCT3	P39077	534 aa	Known RBP	9.99	□□□□□ -0.81
ASP3-4	YLR160C	VMS1	Q04311	632 aa	Known RBP	9.99	□□□□□ -0.81
ASP3-4	YLR160C	YOR296W	Q08748	1289 aa		9.99	□□□□□ -0.81

Retrieved 100 of 5,963 RNA–protein pairs in 43.4 ms