RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeastyeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSF1YLR087C RPL24AP04449 155 aaKnown RBP2.56□□□□□ -2
CSF1YLR087C RAD53P22216 821 aa2.56□□□□□ -2
CSF1YLR087C YEL1P34225 687 aa2.56□□□□□ -2
CSF1YLR087C FHL1P39521 936 aa2.56□□□□□ -2
CSF1YLR087C SNL1P40548 159 aa2.56□□□□□ -2
CSF1YLR087C HDA1P53973 706 aa2.56□□□□□ -2
CSF1YLR087C PSH1Q12161 406 aa2.56□□□□□ -2
CSF1YLR087C DBF4P32325 704 aa2.56□□□□□ -2
CSF1YLR087C PPE1P38796 400 aa2.56□□□□□ -2
CSF1YLR087C SNZ3P43545 298 aa2.56□□□□□ -2
CSF1YLR087C YGL176CP46945 554 aa2.56□□□□□ -2
CSF1YLR087C SNZ2P53824 298 aa2.56□□□□□ -2
CSF1YLR087C RCF1Q03713 159 aa2.56□□□□□ -2
CSF1YLR087C VAC14Q06708 880 aa2.56□□□□□ -2
CSF1YLR087C YEL077CQ3E7X8 1277 aa2.56□□□□□ -2
CSF1YLR087C REP1P03871 373 aa2.55□□□□□ -2
CSF1YLR087C PSO2P30620 661 aa2.55□□□□□ -2
CSF1YLR087C VPS24P36095 224 aaKnown RBP2.55□□□□□ -2
CSF1YLR087C BCH2P36122 765 aa2.55□□□□□ -2
CSF1YLR087C DRE2P36152 348 aa2.55□□□□□ -2
CSF1YLR087C RIM11P38615 370 aa2.55□□□□□ -2
CSF1YLR087C VTC3Q02725 835 aa2.55□□□□□ -2
CSF1YLR087C BCH1Q05029 724 aa2.55□□□□□ -2
CSF1YLR087C LCB1P25045 558 aaKnown RBP2.55□□□□□ -2
CSF1YLR087C FAR7P43592 221 aa2.55□□□□□ -2
CSF1YLR087C BIR1P47134 954 aa2.55□□□□□ -2
CSF1YLR087C IMP4P53941 290 aaKnown RBP2.55□□□□□ -2
CSF1YLR087C YPL109CQ02981 657 aa2.55□□□□□ -2
CSF1YLR087C KAR1P11927 433 aa2.55□□□□□ -2
CSF1YLR087C SDS3P40505 327 aa2.55□□□□□ -2
CSF1YLR087C IRR1P40541 1150 aa2.55□□□□□ -2
CSF1YLR087C MAL13P53338 473 aa2.55□□□□□ -2
CSF1YLR087C RRM3P38766 723 aa2.55□□□□□ -2
CSF1YLR087C CRN1Q06440 651 aa2.55□□□□□ -2
CSF1YLR087C CDC45Q08032 650 aa2.55□□□□□ -2
CSF1YLR087C GDB1Q06625 1536 aa2.55□□□□□ -2
CSF1YLR087C YEL043WP32618 956 aa2.55□□□□□ -2
CSF1YLR087C SGT2Q12118 346 aaKnown RBP2.55□□□□□ -2
CSF1YLR087C GRR1P24814 1151 aa2.55□□□□□ -2
CSF1YLR087C MRC1P25588 1096 aa2.55□□□□□ -2
CSF1YLR087C SLA2P33338 968 aa2.55□□□□□ -2
CSF1YLR087C BDF1P35817 686 aa2.55□□□□□ -2
CSF1YLR087C MTR4P47047 1073 aaKnown RBP2.55□□□□□ -2
CSF1YLR087C YGR054WP53235 642 aaKnown RBP2.55□□□□□ -2
CSF1YLR087C VPS16Q03308 798 aa2.55□□□□□ -2
CSF1YLR087C ECM11Q04110 302 aa2.55□□□□□ -2
CSF1YLR087C GLO3P38682 493 aaKnown RBP2.55□□□□□ -2
CSF1YLR087C DON1Q05610 365 aa2.55□□□□□ -2
CSF1YLR087C VTH1P40438 1549 aa2.55□□□□□ -2
CSF1YLR087C VTH2P40890 1549 aa2.55□□□□□ -2
CSF1YLR087C ATG2P53855 1592 aa2.54□□□□□ -2
CSF1YLR087C GCD1P09032 578 aaPredicted RBP2.54□□□□□ -2
CSF1YLR087C KIP3P53086 805 aaKnown RBP2.54□□□□□ -2
CSF1YLR087C ALD3P54114 506 aa2.54□□□□□ -2
CSF1YLR087C ERO1Q03103 563 aa2.54□□□□□ -2
CSF1YLR087C ADE13Q05911 482 aaKnown RBP2.54□□□□□ -2
CSF1YLR087C RGA2Q06407 1009 aa2.54□□□□□ -2
CSF1YLR087C MCM21Q06675 368 aa2.54□□□□□ -2
CSF1YLR087C TFC4P33339 1025 aa2.54□□□□□ -2
CSF1YLR087C YKR018CP36114 725 aa2.54□□□□□ -2
CSF1YLR087C GRE3P38715 327 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
CSF1YLR087C OXR1Q08952 273 aa2.54□□□□□ -2
CSF1YLR087C NYV1Q12255 253 aa2.54□□□□□ -2
CSF1YLR087C URB1P34241 1764 aaKnown RBP2.54□□□□□ -2
CSF1YLR087C HCM1P25364 564 aa2.54□□□□□ -2
CSF1YLR087C CIN4P39110 191 aa2.54□□□□□ -2
CSF1YLR087C UBP12P39538 1254 aa2.54□□□□□ -2
CSF1YLR087C CKB1P43639 278 aa2.54□□□□□ -2
CSF1YLR087C ARC35P53731 342 aaKnown RBP2.54□□□□□ -2
CSF1YLR087C SGO1Q08490 590 aa2.54□□□□□ -2
CSF1YLR087C ATP4P05626 244 aa2.54□□□□□ -2
CSF1YLR087C ACE2P21192 770 aa2.54□□□□□ -2
CSF1YLR087C MEI5P32489 222 aa2.54□□□□□ -2
CSF1YLR087C COY1P34237 679 aa2.54□□□□□ -2
CSF1YLR087C VMR1P38735 1592 aa2.54□□□□□ -2
CSF1YLR087C SSZ1P38788 538 aaKnown RBP2.54□□□□□ -2
CSF1YLR087C SUR2P38992 349 aa2.54□□□□□ -2
CSF1YLR087C BBC1P47068 1157 aa2.54□□□□□ -2
CSF1YLR087C YJR030CP47101 745 aa2.54□□□□□ -2
CSF1YLR087C MOG1P47123 218 aa2.54□□□□□ -2
CSF1YLR087C BRE5P53741 515 aaKnown RBP2.54□□□□□ -2
CSF1YLR087C RPL22BP56628 122 aaKnown RBP2.54□□□□□ -2
CSF1YLR087C SLX4Q12098 748 aa2.54□□□□□ -2
CSF1YLR087C CPA2P03965 1118 aaKnown RBP2.54□□□□□ -2
CSF1YLR087C ISY1P21374 235 aaPredicted RBP2.54□□□□□ -2
CSF1YLR087C SNT1P25357 1226 aa2.54□□□□□ -2
CSF1YLR087C GRX7P38068 203 aa2.54□□□□□ -2
CSF1YLR087C HAL5P38970 855 aaKnown RBP2.54□□□□□ -2
CSF1YLR087C CSR1Q06705 408 aaKnown RBP2.54□□□□□ -2
CSF1YLR087C PIN2Q12057 282 aa2.54□□□□□ -2
CSF1YLR087C BUD3P25558 1636 aa2.54□□□□□ -2
CSF1YLR087C APC1P53886 1748 aa2.54□□□□□ -2
CSF1YLR087C YKL091CP33324 310 aaKnown RBP2.54□□□□□ -2
CSF1YLR087C LEU5P38702 357 aa2.54□□□□□ -2
CSF1YLR087C YJR061WP40355 935 aa2.54□□□□□ -2
CSF1YLR087C UTP25P40498 721 aaKnown RBP2.54□□□□□ -2
CSF1YLR087C ROX1P25042 368 aa2.54□□□□□ -2
CSF1YLR087C RPN2P32565 945 aaKnown RBP2.54□□□□□ -2
CSF1YLR087C TRZ1P36159 838 aaPredicted RBP2.54□□□□□ -2
CSF1YLR087C ERP2P39704 215 aa2.54□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 36.5 ms