RNA–Protein interactions for RNA: YKR098C

UBP11, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP11, Length 2,154 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP11YKR098C TAF13P11747 167 aa3.12□□□□□ -1.91
UBP11YKR098C RDH54P38086 958 aa3.12□□□□□ -1.91
UBP11YKR098C YHR020WP38708 688 aaKnown RBP3.12□□□□□ -1.91
UBP11YKR098C OSH7P38755 437 aa3.12□□□□□ -1.91
UBP11YKR098C INP51P40559 946 aaKnown RBP3.12□□□□□ -1.91
UBP11YKR098C TYW3P53177 273 aa3.12□□□□□ -1.91
UBP11YKR098C NAM8Q00539 523 aaKnown RBP3.12□□□□□ -1.91
UBP11YKR098C UBP3Q01477 912 aaKnown RBP RIP-Chip data3.12□□□□□ -1.91 RIP-Chip
UBP11YKR098C RSC2Q06488 889 aa3.12□□□□□ -1.91
UBP11YKR098C OPT2Q06593 877 aa3.12□□□□□ -1.91
UBP11YKR098C BAS1P22035 811 aa3.11□□□□□ -1.91
UBP11YKR098C STE5P32917 917 aa3.11□□□□□ -1.91
UBP11YKR098C TFA2P36145 328 aa3.11□□□□□ -1.91
UBP11YKR098C AMN1P38285 549 aaPredicted RBP3.11□□□□□ -1.91
UBP11YKR098C MSC7P38694 644 aa3.11□□□□□ -1.91
UBP11YKR098C FPR3P38911 411 aaKnown RBP3.11□□□□□ -1.91
UBP11YKR098C BIO5P53744 561 aaKnown RBP3.11□□□□□ -1.91
UBP11YKR098C HEH2Q03281 663 aa3.11□□□□□ -1.91
UBP11YKR098C TRP2P00899 507 aaKnown RBP3.11□□□□□ -1.91
UBP11YKR098C RAD27P26793 382 aa3.11□□□□□ -1.91
UBP11YKR098C EXO5P38289 585 aa3.11□□□□□ -1.91
UBP11YKR098C YJL181WP46987 611 aa3.11□□□□□ -1.91
UBP11YKR098C TIM54P47045 478 aa3.11□□□□□ -1.91
UBP11YKR098C SIW14P53965 281 aa3.11□□□□□ -1.91
UBP11YKR098C NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.11□□□□□ -1.91not detected
UBP11YKR098C REC8Q12188 680 aa3.11□□□□□ -1.91
UBP11YKR098C MRP10O75012 95 aa3.1□□□□□ -1.91
UBP11YKR098C AGP1P25376 633 aa3.1□□□□□ -1.91
UBP11YKR098C RER2P35196 286 aa3.1□□□□□ -1.91
UBP11YKR098C SEA4P38164 1038 aa3.1□□□□□ -1.91
UBP11YKR098C SHU2P38957 223 aa3.1□□□□□ -1.91
UBP11YKR098C YJR124CP47159 448 aa3.1□□□□□ -1.91
UBP11YKR098C YNR065CP53751 1116 aa3.1□□□□□ -1.91
UBP11YKR098C YLR346CQ06139 101 aa3.1□□□□□ -1.91
UBP11YKR098C TY1A-BLQ12266 440 aa3.1□□□□□ -1.91
UBP11YKR098C DIT1P21623 536 aa3.1□□□□□ -1.91
UBP11YKR098C VMA4P22203 233 aaKnown RBP3.1□□□□□ -1.91
UBP11YKR098C TIM23P32897 222 aa3.1□□□□□ -1.91
UBP11YKR098C GLY1P37303 387 aaKnown RBP3.1□□□□□ -1.91
UBP11YKR098C YBR184WP38299 523 aa3.1□□□□□ -1.91
UBP11YKR098C NUP82P40368 713 aa3.1□□□□□ -1.91
UBP11YKR098C ENT3P47160 408 aa3.1□□□□□ -1.91
UBP11YKR098C FLC1Q08967 793 aa3.1□□□□□ -1.91
UBP11YKR098C MET6P05694 767 aaKnown RBP3.09□□□□□ -1.91
UBP11YKR098C HTS1P07263 546 aaKnown RBP3.09□□□□□ -1.91
UBP11YKR098C LYP1P32487 611 aa3.09□□□□□ -1.91
UBP11YKR098C CHZ1P40019 153 aaPredicted RBP3.09□□□□□ -1.91
UBP11YKR098C LSB6P42951 607 aa3.09□□□□□ -1.91
UBP11YKR098C SHE9Q04172 456 aa3.09□□□□□ -1.91
UBP11YKR098C ESC2Q06340 456 aa3.09□□□□□ -1.91
UBP11YKR098C SOG2Q08817 791 aa3.09□□□□□ -1.91
UBP11YKR098C TY1A-LR4P0C2I8 440 aaKnown RBP3.08□□□□□ -1.92
UBP11YKR098C TY1A-DR6P0CX70 440 aa3.08□□□□□ -1.92
UBP11YKR098C TY1A-ER1P0CX71 440 aa3.08□□□□□ -1.92
UBP11YKR098C TY1A-LR2P0CX72 440 aa3.08□□□□□ -1.92
UBP11YKR098C TY1A-PLP0CX73 440 aa3.08□□□□□ -1.92
UBP11YKR098C TY1A-JR1P0CX74 440 aa3.08□□□□□ -1.92
UBP11YKR098C TY1A-LR3P0CX75 440 aa3.08□□□□□ -1.92
UBP11YKR098C TY1A-ML2P0CX76 440 aa3.08□□□□□ -1.92
UBP11YKR098C ABD1P32783 436 aaPredicted RBP3.08□□□□□ -1.92
UBP11YKR098C RSP5P39940 809 aaKnown RBP3.08□□□□□ -1.92
UBP11YKR098C PRK1P40494 810 aa3.08□□□□□ -1.92
UBP11YKR098C SCW11P53189 542 aa3.08□□□□□ -1.92
UBP11YKR098C ROD1Q02805 837 aa3.08□□□□□ -1.92
UBP11YKR098C SPO20Q04359 397 aa3.08□□□□□ -1.92
UBP11YKR098C SPO75Q07798 868 aa3.08□□□□□ -1.92
UBP11YKR098C TY1A-GR1Q12085 440 aa3.08□□□□□ -1.92
UBP11YKR098C TY1A-PR3Q6Q5H1 440 aaKnown RBP3.08□□□□□ -1.92
UBP11YKR098C TY1A-OLQ92392 440 aaKnown RBP3.08□□□□□ -1.92
UBP11YKR098C FPS1P23900 669 aa3.08□□□□□ -1.92
UBP11YKR098C SBA1P28707 216 aaKnown RBP3.08□□□□□ -1.92
UBP11YKR098C MKK2P32491 506 aa3.08□□□□□ -1.92
UBP11YKR098C YKL077WP36081 392 aa3.08□□□□□ -1.92
UBP11YKR098C VBA5P36172 582 aa3.08□□□□□ -1.92
UBP11YKR098C MNN1P39106 762 aa3.08□□□□□ -1.92
UBP11YKR098C IRR1P40541 1150 aa3.08□□□□□ -1.92
UBP11YKR098C FET4P40988 552 aa3.08□□□□□ -1.92
UBP11YKR098C PFD1P46988 109 aa3.08□□□□□ -1.92
UBP11YKR098C YGR125WP53273 1036 aa3.08□□□□□ -1.92
UBP11YKR098C CUZ1P53899 274 aa3.08□□□□□ -1.92
UBP11YKR098C YLR225CQ05948 407 aaKnown RBP3.08□□□□□ -1.92
UBP11YKR098C PHO8P11491 566 aa3.07□□□□□ -1.92
UBP11YKR098C RPL8BP29453 256 aaKnown RBP3.07□□□□□ -1.92
UBP11YKR098C MRP8P35719 219 aa3.07□□□□□ -1.92
UBP11YKR098C BRE2P43132 505 aa3.07□□□□□ -1.92
UBP11YKR098C YMR265CQ03508 461 aaKnown RBP3.07□□□□□ -1.92
UBP11YKR098C TY1A-DR2Q03964 440 aaKnown RBP3.07□□□□□ -1.92
UBP11YKR098C TIF35Q04067 274 aaKnown RBP3.07□□□□□ -1.92
UBP11YKR098C POB3Q04636 552 aaKnown RBP3.07□□□□□ -1.92
UBP11YKR098C FMP25Q08023 583 aa3.07□□□□□ -1.92
UBP11YKR098C YIG1Q08956 461 aa3.07□□□□□ -1.92
UBP11YKR098C OSH2Q12451 1283 aa3.07□□□□□ -1.92
UBP11YKR098C SCP160P06105 1222 aaKnown RBP RIP-Chip data3.07□□□□□ -1.92not detected
UBP11YKR098C SBP1P10080 294 aaKnown RBP3.07□□□□□ -1.92
UBP11YKR098C KRI1P42846 591 aaKnown RBP3.07□□□□□ -1.92
UBP11YKR098C ROG3P43602 733 aa3.07□□□□□ -1.92
UBP11YKR098C GUP1P53154 560 aa3.07□□□□□ -1.92
UBP11YKR098C GCR2Q01722 534 aa3.07□□□□□ -1.92
UBP11YKR098C HAS1Q03532 505 aaKnown RBP3.07□□□□□ -1.92
UBP11YKR098C UTP5Q04177 643 aaKnown RBP3.07□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 47.6 ms