RNA–Protein interactions for RNA: YKL020C

SPT23, Transcript of ER membrane protein involved in regulation of OLE1 transcription, yeastyeast

Gene SPT23, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT23YKL020C NOC3Q07896 663 aaPredicted RBP4.34□□□□□ -1.71
SPT23YKL020C RAV1P47104 1357 aa4.34□□□□□ -1.71
SPT23YKL020C YOR093CQ12275 1648 aa4.34□□□□□ -1.71
SPT23YKL020C LEU1P07264 779 aaKnown RBP4.34□□□□□ -1.72
SPT23YKL020C MRPS28P21771 286 aa4.34□□□□□ -1.72
SPT23YKL020C ACP1P32463 125 aa4.34□□□□□ -1.72
SPT23YKL020C MRPL10P36520 322 aa4.34□□□□□ -1.72
SPT23YKL020C FTR1P40088 404 aa4.34□□□□□ -1.72
SPT23YKL020C YTA6P40328 754 aa4.34□□□□□ -1.72
SPT23YKL020C IOC3P43596 787 aa4.34□□□□□ -1.72
SPT23YKL020C RAD17P48581 401 aa4.34□□□□□ -1.72
SPT23YKL020C HRQ1Q05549 1077 aa4.34□□□□□ -1.72
SPT23YKL020C YOL057WQ08225 711 aa4.34□□□□□ -1.72
SPT23YKL020C DBP10Q12389 995 aaKnown RBP4.34□□□□□ -1.72
SPT23YKL020C DUR1,2P32528 1835 aaKnown RBP4.33□□□□□ -1.72
SPT23YKL020C KAR1P11927 433 aa4.33□□□□□ -1.72
SPT23YKL020C NAT1P12945 854 aaKnown RBP4.33□□□□□ -1.72
SPT23YKL020C TSR4P25040 408 aa4.33□□□□□ -1.72
SPT23YKL020C SKI2P35207 1287 aaKnown RBP RIP-Chip data4.33□□□□□ -1.72not detected
SPT23YKL020C OCA5P38738 679 aa4.33□□□□□ -1.72
SPT23YKL020C SSZ1P38788 538 aaKnown RBP4.33□□□□□ -1.72
SPT23YKL020C RSM25P40496 264 aa4.33□□□□□ -1.72
SPT23YKL020C HOT1Q03213 719 aa4.33□□□□□ -1.72
SPT23YKL020C RRN11Q04712 507 aa4.33□□□□□ -1.72
SPT23YKL020C CSR1Q06705 408 aaKnown RBP4.33□□□□□ -1.72
SPT23YKL020C ISA1Q07821 250 aaPredicted RBP4.33□□□□□ -1.72
SPT23YKL020C RPA190P10964 1664 aaKnown RBP4.33□□□□□ -1.72
SPT23YKL020C SNT2P53127 1403 aa4.33□□□□□ -1.72
SPT23YKL020C APN1P22936 367 aa4.33□□□□□ -1.72
SPT23YKL020C PAP1P29468 568 aaKnown RBP4.33□□□□□ -1.72
SPT23YKL020C SWC3P31376 625 aa4.33□□□□□ -1.72
SPT23YKL020C OTU2P38747 307 aaKnown RBP4.33□□□□□ -1.72
SPT23YKL020C CWH41P53008 833 aa4.33□□□□□ -1.72
SPT23YKL020C MPC54Q08550 464 aa4.33□□□□□ -1.72
SPT23YKL020C RIO1Q12196 484 aaKnown RBP4.33□□□□□ -1.72
SPT23YKL020C ENT1Q12518 454 aa4.33□□□□□ -1.72
SPT23YKL020C CHC1P22137 1653 aaKnown RBP4.33□□□□□ -1.72
SPT23YKL020C HEM1P09950 548 aaPredicted RBP4.33□□□□□ -1.72
SPT23YKL020C MAK11P20484 414 aaKnown RBP4.33□□□□□ -1.72
SPT23YKL020C TMN3P40071 706 aa4.33□□□□□ -1.72
SPT23YKL020C PXA1P41909 870 aa4.33□□□□□ -1.72
SPT23YKL020C CTK3P46963 296 aaPredicted RBP4.33□□□□□ -1.72
SPT23YKL020C SET2P46995 733 aaKnown RBP4.33□□□□□ -1.72
SPT23YKL020C YMR111CQ04461 462 aaPredicted RBP4.33□□□□□ -1.72
SPT23YKL020C FUS2Q05670 677 aa4.33□□□□□ -1.72
SPT23YKL020C YDL073WQ07454 984 aa4.33□□□□□ -1.72
SPT23YKL020C YOR352WQ08816 343 aa4.33□□□□□ -1.72
SPT23YKL020C PDR11P40550 1411 aa4.32□□□□□ -1.72
SPT23YKL020C VMA1P17255 1071 aaKnown RBP4.32□□□□□ -1.72
SPT23YKL020C HNM1P19807 563 aa4.32□□□□□ -1.72
SPT23YKL020C RFC5P38251 354 aa4.32□□□□□ -1.72
SPT23YKL020C SSL2Q00578 843 aa4.32□□□□□ -1.72
SPT23YKL020C VMS1Q04311 632 aaKnown RBP4.32□□□□□ -1.72
SPT23YKL020C MSB4Q12317 492 aa4.32□□□□□ -1.72
SPT23YKL020C IML1P47170 1584 aa4.32□□□□□ -1.72
SPT23YKL020C SEN2P16658 377 aa4.32□□□□□ -1.72
SPT23YKL020C MRPL25P23369 157 aa4.32□□□□□ -1.72
SPT23YKL020C CDC48P25694 835 aaKnown RBP4.32□□□□□ -1.72
SPT23YKL020C TTI1P36097 1038 aa4.32□□□□□ -1.72
SPT23YKL020C UIP5P36137 443 aa4.32□□□□□ -1.72
SPT23YKL020C ABZ1P37254 787 aaPredicted RBP4.32□□□□□ -1.72
SPT23YKL020C RTS1P38903 757 aa4.32□□□□□ -1.72
SPT23YKL020C PTP3P40048 928 aa4.32□□□□□ -1.72
SPT23YKL020C YFR006WP43590 535 aa4.32□□□□□ -1.72
SPT23YKL020C GCD14P46959 383 aaPredicted RBP4.32□□□□□ -1.72
SPT23YKL020C ECM11Q04110 302 aa4.32□□□□□ -1.72
SPT23YKL020C SPP382Q06411 708 aaPredicted RBP4.32□□□□□ -1.72
SPT23YKL020C RTC5Q12108 567 aaKnown RBP4.32□□□□□ -1.72
SPT23YKL020C DNF3Q12674 1656 aa4.32□□□□□ -1.72
SPT23YKL020C LYS2P07702 1392 aa4.31□□□□□ -1.72
SPT23YKL020C ARD1P07347 238 aaPredicted RBP4.31□□□□□ -1.72
SPT23YKL020C PET123P17558 318 aa4.31□□□□□ -1.72
SPT23YKL020C PKC1P24583 1151 aa4.31□□□□□ -1.72
SPT23YKL020C CSE1P33307 960 aa4.31□□□□□ -1.72
SPT23YKL020C MXR1P40029 184 aa4.31□□□□□ -1.72
SPT23YKL020C IRR1P40541 1150 aa4.31□□□□□ -1.72
SPT23YKL020C SPR3P41901 512 aa4.31□□□□□ -1.72
SPT23YKL020C NOP15P53927 220 aaPredicted RBP4.31□□□□□ -1.72
SPT23YKL020C PUF6Q04373 656 aaKnown RBP4.31□□□□□ -1.72
SPT23YKL020C YPR097WQ06839 1073 aa4.31□□□□□ -1.72
SPT23YKL020C DRS2P39524 1355 aa4.31□□□□□ -1.72
SPT23YKL020C CDC10P25342 322 aaKnown RBP4.31□□□□□ -1.72
SPT23YKL020C SEC8P32855 1065 aa4.31□□□□□ -1.72
SPT23YKL020C UBP14P38237 781 aaKnown RBP4.31□□□□□ -1.72
SPT23YKL020C RGD1P38339 666 aa4.31□□□□□ -1.72
SPT23YKL020C SWD1P39706 426 aa4.31□□□□□ -1.72
SPT23YKL020C LAM5P43560 674 aa4.31□□□□□ -1.72
SPT23YKL020C YJR142WP47173 342 aa4.31□□□□□ -1.72
SPT23YKL020C HOP2P53187 214 aa4.31□□□□□ -1.72
SPT23YKL020C APD1P38281 316 aa4.31□□□□□ -1.72
SPT23YKL020C HSM3P38348 480 aa4.31□□□□□ -1.72
SPT23YKL020C GGA2P38817 585 aaKnown RBP4.31□□□□□ -1.72
SPT23YKL020C ALG2P43636 503 aa4.31□□□□□ -1.72
SPT23YKL020C ORM1P53224 222 aa4.31□□□□□ -1.72
SPT23YKL020C NNT1Q05874 261 aa4.31□□□□□ -1.72
SPT23YKL020C IRC3Q06683 689 aa4.31□□□□□ -1.72
SPT23YKL020C ABP140Q08641 628 aaKnown RBP4.31□□□□□ -1.72
SPT23YKL020C APC11Q12157 165 aa4.31□□□□□ -1.72
SPT23YKL020C SPO14P36126 1683 aa4.3□□□□□ -1.72
SPT23YKL020C RRP1P35178 278 aaPredicted RBP4.3□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 86.9 ms