RNA–Protein interactions for RNA: YJL054W

TIM54, Transcript of Component of the mitochondrial TIM22 complex, yeastyeast

Gene TIM54, Length 1,437 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TIM54YJL054W KTR7P40504 517 aa6.71□□□□□ -1.34
TIM54YJL054W TRM44Q02648 567 aaKnown RBP6.71□□□□□ -1.34
TIM54YJL054W GAS5Q08193 484 aa6.71□□□□□ -1.34
TIM54YJL054W RRG1Q12167 365 aaPredicted RBP6.71□□□□□ -1.34
TIM54YJL054W TOM1Q03280 3268 aa6.71□□□□□ -1.34
TIM54YJL054W SAC3P46674 1301 aa6.71□□□□□ -1.34
TIM54YJL054W AFG2P32794 780 aa6.7□□□□□ -1.34
TIM54YJL054W SOH1P38633 127 aa6.7□□□□□ -1.34
TIM54YJL054W SPL2P38839 148 aa6.7□□□□□ -1.34
TIM54YJL054W CWC15Q03772 175 aaKnown RBP6.7□□□□□ -1.34
TIM54YJL054W MET32Q12041 191 aa6.7□□□□□ -1.34
TIM54YJL054W CDC4P07834 779 aa6.69□□□□□ -1.34
TIM54YJL054W ATG3P40344 310 aa6.69□□□□□ -1.34
TIM54YJL054W VPS4P52917 437 aa6.69□□□□□ -1.34
TIM54YJL054W HST3P53687 447 aa6.69□□□□□ -1.34
TIM54YJL054W MTC5Q03897 1148 aa6.69□□□□□ -1.34
TIM54YJL054W PSH1Q12161 406 aa6.69□□□□□ -1.34
TIM54YJL054W POM152P39685 1337 aa6.69□□□□□ -1.34
TIM54YJL054W RPP0P05317 312 aaKnown RBP6.68□□□□□ -1.34
TIM54YJL054W SUP35P05453 685 aaKnown RBP6.68□□□□□ -1.34
TIM54YJL054W HPR1P17629 752 aaKnown RBP6.68□□□□□ -1.34
TIM54YJL054W MGM1P32266 881 aa6.68□□□□□ -1.34
TIM54YJL054W TTI1P36097 1038 aa6.68□□□□□ -1.34
TIM54YJL054W RPT4P53549 437 aaKnown RBP6.68□□□□□ -1.34
TIM54YJL054W ISR1Q06098 443 aaKnown RBP6.68□□□□□ -1.34
TIM54YJL054W THI3Q07471 609 aa6.68□□□□□ -1.34
TIM54YJL054W HKR1P41809 1802 aa6.68□□□□□ -1.34
TIM54YJL054W RDS2P19541 446 aaKnown RBP6.67□□□□□ -1.34
TIM54YJL054W NGR1P32831 672 aaKnown RBP6.67□□□□□ -1.34
TIM54YJL054W ASH1P34233 588 aa6.67□□□□□ -1.34
TIM54YJL054W EMW1P42842 904 aaKnown RBP6.67□□□□□ -1.34
TIM54YJL054W PRP42Q03776 544 aaKnown RBP6.67□□□□□ -1.34
TIM54YJL054W MKS1P34072 584 aa6.67□□□□□ -1.34
TIM54YJL054W STV1P37296 890 aa6.67□□□□□ -1.34
TIM54YJL054W UBP12P39538 1254 aa6.67□□□□□ -1.34
TIM54YJL054W NOP8Q08287 484 aaPredicted RBP6.67□□□□□ -1.34
TIM54YJL054W FIG2P25653 1609 aa6.66□□□□□ -1.34
TIM54YJL054W SUI2P20459 304 aaKnown RBP6.66□□□□□ -1.34
TIM54YJL054W MRT4P33201 236 aaKnown RBP6.66□□□□□ -1.34
TIM54YJL054W NUG1P40010 520 aaKnown RBP6.66□□□□□ -1.34
TIM54YJL054W GSM1P42950 618 aa6.66□□□□□ -1.34
TIM54YJL054W YGR122WP53272 402 aa6.66□□□□□ -1.34
TIM54YJL054W LCB1P25045 558 aaKnown RBP6.65□□□□□ -1.35
TIM54YJL054W SWC3P31376 625 aa6.65□□□□□ -1.35
TIM54YJL054W VPS27P40343 622 aaKnown RBP6.65□□□□□ -1.35
TIM54YJL054W SEN54Q02825 467 aaPredicted RBP6.65□□□□□ -1.35
TIM54YJL054W SNU66Q12420 587 aaPredicted RBP6.65□□□□□ -1.35
TIM54YJL054W TIF6Q12522 245 aaKnown RBP6.65□□□□□ -1.35
TIM54YJL054W RAD24P32641 659 aa6.64□□□□□ -1.35
TIM54YJL054W SIS2P36024 562 aa6.64□□□□□ -1.35
TIM54YJL054W RRT6P53117 311 aaPredicted RBP6.64□□□□□ -1.35
TIM54YJL054W IRC4Q03036 179 aa6.64□□□□□ -1.35
TIM54YJL054W DFG5Q05031 458 aa6.64□□□□□ -1.35
TIM54YJL054W PSF3Q12146 194 aa6.64□□□□□ -1.35
TIM54YJL054W SRF1Q12516 437 aa6.64□□□□□ -1.35
TIM54YJL054W ARG82P07250 355 aa6.63□□□□□ -1.35
TIM54YJL054W HVG1P0CE11 249 aa6.63□□□□□ -1.35
TIM54YJL054W BSD2P38356 321 aa6.63□□□□□ -1.35
TIM54YJL054W APL6P46682 809 aa6.63□□□□□ -1.35
TIM54YJL054W TOS4Q06266 489 aa6.63□□□□□ -1.35
TIM54YJL054W ACK1Q07622 623 aaPredicted RBP6.63□□□□□ -1.35
TIM54YJL054W CBP1P07252 654 aa6.62□□□□□ -1.35
TIM54YJL054W MIP1P15801 1254 aa6.62□□□□□ -1.35
TIM54YJL054W AFT1P22149 690 aa6.62□□□□□ -1.35
TIM54YJL054W FBP26P32604 452 aa6.62□□□□□ -1.35
TIM54YJL054W PEP12P32854 288 aa6.62□□□□□ -1.35
TIM54YJL054W TGL4P36165 910 aa6.62□□□□□ -1.35
TIM54YJL054W PNT1P38969 423 aa6.62□□□□□ -1.35
TIM54YJL054W HAL5P38970 855 aaKnown RBP6.62□□□□□ -1.35
TIM54YJL054W BOI2P39969 1040 aa6.62□□□□□ -1.35
TIM54YJL054W JJJ2P46997 583 aa6.62□□□□□ -1.35
TIM54YJL054W MTC3P53077 123 aa6.62□□□□□ -1.35
TIM54YJL054W UTP13Q05946 817 aaKnown RBP6.62□□□□□ -1.35
TIM54YJL054W WRS1Q12109 432 aaKnown RBP6.62□□□□□ -1.35
TIM54YJL054W FLO11P08640 1367 aa6.62□□□□□ -1.35
TIM54YJL054W ADR1P07248 1323 aa6.61□□□□□ -1.35
TIM54YJL054W RPS19AP07280 144 aaKnown RBP6.61□□□□□ -1.35
TIM54YJL054W RPS19BP07281 144 aaPredicted RBP6.61□□□□□ -1.35
TIM54YJL054W DAT1P13483 248 aaKnown RBP6.61□□□□□ -1.35
TIM54YJL054W RPS7AP26786 190 aaKnown RBP6.61□□□□□ -1.35
TIM54YJL054W UTP7P40055 554 aaKnown RBP6.61□□□□□ -1.35
TIM54YJL054W ECM23Q02710 187 aa6.61□□□□□ -1.35
TIM54YJL054W ISU1Q03020 165 aa6.61□□□□□ -1.35
TIM54YJL054W CDC45Q08032 650 aa6.61□□□□□ -1.35
TIM54YJL054W CSR2Q12734 1121 aa6.61□□□□□ -1.35
TIM54YJL054W CSI1Q04368 295 aa6.6□□□□□ -1.35
TIM54YJL054W SUB2Q07478 446 aaKnown RBP6.6□□□□□ -1.35
TIM54YJL054W BDS1Q08347 646 aa6.6□□□□□ -1.35
TIM54YJL054W CBC2Q08920 208 aaKnown RBP RIP-Chip data6.6□□□□□ -1.35not detected
TIM54YJL054W NIT1P40447 199 aa6.59□□□□□ -1.35
TIM54YJL054W HDA3Q06623 655 aa6.59□□□□□ -1.35
TIM54YJL054W YFH7P43591 353 aa6.59□□□□□ -1.36
TIM54YJL054W YRB30P53107 440 aaPredicted RBP6.59□□□□□ -1.36
TIM54YJL054W GAL2P13181 574 aa6.58□□□□□ -1.36
TIM54YJL054W PUP1P25043 261 aa6.58□□□□□ -1.36
TIM54YJL054W UTR2P32623 467 aa6.58□□□□□ -1.36
TIM54YJL054W APE3P37302 537 aaKnown RBP6.58□□□□□ -1.36
TIM54YJL054W YJR115WP47152 169 aa6.58□□□□□ -1.36
TIM54YJL054W NCS6P53088 359 aa6.58□□□□□ -1.36
TIM54YJL054W RVB2Q12464 471 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms