RNA–Protein interactions for RNA: YIL017C

VID28, Transcript of GID Complex subunit, serves as adaptor for regulatory subunit Vid24p, yeast

Gene VID28, Length 2,766 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VID28	YIL017C	RTT109	Q07794	436 aa		4.55	□□□□□ -1.68
VID28	YIL017C	CMS1	Q07897	291 aa	Known RBP	4.55	□□□□□ -1.68
VID28	YIL017C	YPL150W	Q12152	901 aa		4.55	□□□□□ -1.68
VID28	YIL017C	SLP1	Q12232	587 aa		4.55	□□□□□ -1.68
VID28	YIL017C	MMP1	Q12372	583 aa		4.55	□□□□□ -1.68
VID28	YIL017C	TY4A-H	Q6Q5P6	413 aa		4.55	□□□□□ -1.68
VID28	YIL017C	NHA1	Q99271	985 aa		4.55	□□□□□ -1.68
VID28	YIL017C	RPL22A	P05749	121 aa	Known RBP	4.54	□□□□□ -1.68
VID28	YIL017C	TFC3	P34111	1160 aa		4.54	□□□□□ -1.68
VID28	YIL017C	DID4	P36108	232 aa		4.54	□□□□□ -1.68
VID28	YIL017C	GDT1	P38301	280 aa	Predicted RBP	4.54	□□□□□ -1.68
VID28	YIL017C	YAP3	P38749	330 aa		4.54	□□□□□ -1.68
VID28	YIL017C	MET10	P39692	1035 aa		4.54	□□□□□ -1.68
VID28	YIL017C	HXT13	P39924	564 aa		4.54	□□□□□ -1.68
VID28	YIL017C	CCM1	P48237	864 aa	Predicted RBP	4.54	□□□□□ -1.68
VID28	YIL017C	SNU71	P53207	620 aa	Known RBP	4.54	□□□□□ -1.68
VID28	YIL017C	ARO80	Q04052	950 aa		4.54	□□□□□ -1.68
VID28	YIL017C	CDC73	Q06697	393 aa		4.54	□□□□□ -1.68
VID28	YIL017C	FRS2	P15625	503 aa	Known RBP	4.54	□□□□□ -1.68
VID28	YIL017C	RPC37	P36121	282 aa		4.54	□□□□□ -1.68
VID28	YIL017C	VID28	P40547	921 aa		4.54	□□□□□ -1.68
VID28	YIL017C	YPT11	P48559	417 aa		4.54	□□□□□ -1.68
VID28	YIL017C	ADE12	P80210	433 aa	Known RBP	4.54	□□□□□ -1.68
VID28	YIL017C	MCM16	Q12262	181 aa		4.54	□□□□□ -1.68
VID28	YIL017C	TOM70	P07213	617 aa	Known RBP	4.53	□□□□□ -1.68
VID28	YIL017C	SES1	P07284	462 aa	Known RBP	4.53	□□□□□ -1.68
VID28	YIL017C	CDC3	P32457	520 aa	Known RBP	4.53	□□□□□ -1.68
VID28	YIL017C	MRP8	P35719	219 aa		4.53	□□□□□ -1.68
VID28	YIL017C	RFC5	P38251	354 aa		4.53	□□□□□ -1.68
VID28	YIL017C	BEM4	P39011	633 aa		4.53	□□□□□ -1.68
VID28	YIL017C	HUL4	P40985	892 aa		4.53	□□□□□ -1.68
VID28	YIL017C	SSL2	Q00578	843 aa		4.53	□□□□□ -1.68
VID28	YIL017C	PKH3	Q03306	898 aa	Predicted RBP	4.53	□□□□□ -1.68
VID28	YIL017C	DPL1	Q05567	589 aa		4.53	□□□□□ -1.68
VID28	YIL017C	MRX10	Q05648	414 aa		4.53	□□□□□ -1.68
VID28	YIL017C	NOP6	Q07623	225 aa	Known RBP	4.53	□□□□□ -1.68
VID28	YIL017C	RPO41	P13433	1351 aa	Known RBP	4.53	□□□□□ -1.68
VID28	YIL017C	RPL19A	P0CX82	189 aa	Known RBP	4.53	□□□□□ -1.68
VID28	YIL017C	RPL19B	P0CX83	189 aa	Predicted RBP	4.53	□□□□□ -1.68
VID28	YIL017C	KRS1	P15180	591 aa	Known RBP	4.53	□□□□□ -1.68
VID28	YIL017C	TPM1	P17536	199 aa	Known RBP	4.53	□□□□□ -1.68
VID28	YIL017C	UBC1	P21734	215 aa	Known RBP	4.53	□□□□□ -1.68
VID28	YIL017C	YDJ1	P25491	409 aa	Known RBP	4.53	□□□□□ -1.68
VID28	YIL017C	AIM9	P40053	627 aa	Known RBP	4.53	□□□□□ -1.68
VID28	YIL017C	PEX14	P53112	341 aa		4.53	□□□□□ -1.68
VID28	YIL017C	YDR338C	Q05497	695 aa		4.53	□□□□□ -1.68
VID28	YIL017C	LCB5	Q06147	687 aa	Known RBP	4.53	□□□□□ -1.68
VID28	YIL017C	AOS1	Q06624	347 aa		4.53	□□□□□ -1.68
VID28	YIL017C	HEL1	P36113	551 aa		4.53	□□□□□ -1.68
VID28	YIL017C	ARB1	P40024	610 aa	Known RBP	4.53	□□□□□ -1.68
VID28	YIL017C	SPO22	P40511	975 aa		4.53	□□□□□ -1.68
VID28	YIL017C	ORM1	P53224	222 aa		4.53	□□□□□ -1.68
VID28	YIL017C	SEC5	P89102	971 aa		4.53	□□□□□ -1.68
VID28	YIL017C	PSK2	Q08217	1101 aa		4.53	□□□□□ -1.68
VID28	YIL017C	YPR204W	Q08995	1032 aa		4.53	□□□□□ -1.68
VID28	YIL017C	YRF1-1	P0CX20	1796 aa		4.52	□□□□□ -1.69
VID28	YIL017C	YRF1-5	P0CX21	1796 aa		4.52	□□□□□ -1.69
VID28	YIL017C	YRF1-8	P0CX22	1796 aa		4.52	□□□□□ -1.69
VID28	YIL017C	ADE3	P07245	946 aa	Known RBP	4.52	□□□□□ -1.69
VID28	YIL017C	YMR085W	P0CF18	432 aa		4.52	□□□□□ -1.69
VID28	YIL017C	PUP1	P25043	261 aa		4.52	□□□□□ -1.69
VID28	YIL017C	KCC4	P25389	1037 aa		4.52	□□□□□ -1.69
VID28	YIL017C	PDB1	P32473	366 aa	Known RBP	4.52	□□□□□ -1.69
VID28	YIL017C	PRX1	P34227	261 aa	Known RBP	4.52	□□□□□ -1.69
VID28	YIL017C	LHS1	P36016	881 aa		4.52	□□□□□ -1.69
VID28	YIL017C	MDJ2	P42834	146 aa		4.52	□□□□□ -1.69
VID28	YIL017C	GCN20	P43535	752 aa	Known RBP	4.52	□□□□□ -1.69
VID28	YIL017C	INP52	P50942	1183 aa		4.52	□□□□□ -1.69
VID28	YIL017C	IST1	P53843	298 aa	Predicted RBP	4.52	□□□□□ -1.69
VID28	YIL017C	JJJ1	P53863	590 aa		4.52	□□□□□ -1.69
VID28	YIL017C	TFB4	Q12004	338 aa		4.52	□□□□□ -1.69
VID28	YIL017C	NKP1	Q12493	238 aa		4.52	□□□□□ -1.69
VID28	YIL017C	TY1B-NL2	Q99337	1749 aa	Known RBP	4.52	□□□□□ -1.69
VID28	YIL017C	GRX4	P32642	244 aa		4.52	□□□□□ -1.69
VID28	YIL017C	PTC4	P38089	393 aa		4.52	□□□□□ -1.69
VID28	YIL017C	ISW1	P38144	1129 aa		4.52	□□□□□ -1.69
VID28	YIL017C	GTT3	P39996	337 aa		4.52	□□□□□ -1.69
VID28	YIL017C	YIL001W	P40560	513 aa		4.52	□□□□□ -1.69
VID28	YIL017C	YJR079W	P47126	109 aa		4.52	□□□□□ -1.69
VID28	YIL017C	SHE4	P51534	789 aa		4.52	□□□□□ -1.69
VID28	YIL017C	FAR8	Q05040	523 aa		4.52	□□□□□ -1.69
VID28	YIL017C	ENO2	P00925	437 aa	Known RBP	4.51	□□□□□ -1.69
VID28	YIL017C	CDC37	P06101	506 aa	Known RBP	4.51	□□□□□ -1.69
VID28	YIL017C	PHO13	P19881	312 aa		4.51	□□□□□ -1.69
VID28	YIL017C	CLB4	P24871	460 aa		4.51	□□□□□ -1.69
VID28	YIL017C	NIP1	P32497	812 aa	Known RBP	4.51	□□□□□ -1.69
VID28	YIL017C	MFT1	P33441	392 aa	Known RBP	4.51	□□□□□ -1.69
VID28	YIL017C	RPL34B	P40525	121 aa	Known RBP	4.51	□□□□□ -1.69
VID28	YIL017C	SEC26	P41810	973 aa	Known RBP	4.51	□□□□□ -1.69
VID28	YIL017C	YGL242C	P53066	181 aa		4.51	□□□□□ -1.69
VID28	YIL017C	HXT17	P53631	564 aa		4.51	□□□□□ -1.69
VID28	YIL017C	NUR1	Q12066	484 aa		4.51	□□□□□ -1.69
VID28	YIL017C	SEC23	P15303	768 aa	Known RBP	4.51	□□□□□ -1.69
VID28	YIL017C	CNS1	P33313	385 aa		4.51	□□□□□ -1.69
VID28	YIL017C	SLD2	P34252	453 aa		4.51	□□□□□ -1.69
VID28	YIL017C	TBS1	P38114	1094 aa		4.51	□□□□□ -1.69
VID28	YIL017C	MAM1	P40065	302 aa		4.51	□□□□□ -1.69
VID28	YIL017C	VPS53	P47061	822 aa		4.51	□□□□□ -1.69
VID28	YIL017C	STR2	P47164	639 aa		4.51	□□□□□ -1.69
VID28	YIL017C	ALD2	P47771	506 aa		4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 8.8 ms