RNA–Protein interactions for RNA: YHR190W

ERG9, Transcript of Farnesyl-diphosphate farnesyl transferase (squalene synthase), yeastyeast

Gene ERG9, Length 1,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ERG9YHR190W DOT1Q04089 582 aaKnown RBP5.74□□□□□ -1.49
ERG9YHR190W NUT2Q06213 157 aa5.74□□□□□ -1.49
ERG9YHR190W CIT3P43635 486 aa5.73□□□□□ -1.49
ERG9YHR190W BRE4Q07660 1125 aa5.73□□□□□ -1.49
ERG9YHR190W MCM5P29496 775 aaKnown RBP5.72□□□□□ -1.49
ERG9YHR190W GCD6P32501 712 aaKnown RBP5.72□□□□□ -1.49
ERG9YHR190W YKL077WP36081 392 aa5.72□□□□□ -1.49
ERG9YHR190W GPT2P36148 743 aa5.72□□□□□ -1.49
ERG9YHR190W ARL1P38116 183 aaKnown RBP5.72□□□□□ -1.49
ERG9YHR190W YAF9P53930 226 aa5.72□□□□□ -1.49
ERG9YHR190W FRT1Q99332 602 aa5.72□□□□□ -1.49
ERG9YHR190W REI1P38344 393 aaPredicted RBP5.71□□□□□ -1.5
ERG9YHR190W DUR3P33413 735 aa5.7□□□□□ -1.5
ERG9YHR190W STM1P39015 273 aaKnown RBP5.7□□□□□ -1.5
ERG9YHR190W YCS4Q06156 1176 aa5.7□□□□□ -1.5
ERG9YHR190W MAG2Q06436 670 aaKnown RBP5.7□□□□□ -1.5
ERG9YHR190W AVO1Q08236 1176 aa5.69□□□□□ -1.5
ERG9YHR190W YHL050CP38721 697 aa5.68□□□□□ -1.5
ERG9YHR190W SSF1P38789 453 aaPredicted RBP5.68□□□□□ -1.5
ERG9YHR190W YHR219WP38900 624 aa5.68□□□□□ -1.5
ERG9YHR190W IRC24P40580 263 aa5.68□□□□□ -1.5
ERG9YHR190W MON1P53129 644 aa5.68□□□□□ -1.5
ERG9YHR190W RPS4AP0CX35 261 aaKnown RBP5.67□□□□□ -1.5
ERG9YHR190W RPS4BP0CX36 261 aaKnown RBP5.67□□□□□ -1.5
ERG9YHR190W KAR2P16474 682 aaKnown RBP5.67□□□□□ -1.5
ERG9YHR190W VPS35P34110 944 aa5.67□□□□□ -1.5
ERG9YHR190W CTH1P47976 325 aa5.67□□□□□ -1.5
ERG9YHR190W RCM1P53972 490 aa5.67□□□□□ -1.5
ERG9YHR190W GPI13Q07830 1017 aa5.67□□□□□ -1.5
ERG9YHR190W NNK1P36003 928 aa5.66□□□□□ -1.5
ERG9YHR190W ATG14P38270 344 aa5.66□□□□□ -1.5
ERG9YHR190W PPX1P38698 397 aa5.66□□□□□ -1.5
ERG9YHR190W AVT1P47082 602 aa5.66□□□□□ -1.5
ERG9YHR190W OXR1Q08952 273 aa5.66□□□□□ -1.5
ERG9YHR190W WHI3P34761 661 aaKnown RBP5.65□□□□□ -1.51
ERG9YHR190W MSH4P40965 878 aaPredicted RBP5.65□□□□□ -1.51
ERG9YHR190W MTR4P47047 1073 aaKnown RBP5.65□□□□□ -1.51
ERG9YHR190W ALG6Q12001 544 aaKnown RBP5.65□□□□□ -1.51
ERG9YHR190W SEC20P28791 383 aa5.64□□□□□ -1.51
ERG9YHR190W SMY2P32909 740 aaKnown RBP5.64□□□□□ -1.51
ERG9YHR190W MSC6Q08818 692 aaKnown RBP5.64□□□□□ -1.51
ERG9YHR190W ALT1P52893 592 aa5.63□□□□□ -1.51
ERG9YHR190W YGR045CP53229 120 aa5.63□□□□□ -1.51
ERG9YHR190W NOG1Q02892 647 aaKnown RBP5.63□□□□□ -1.51
ERG9YHR190W NFS1P25374 497 aa5.62□□□□□ -1.51
ERG9YHR190W SQT1P35184 431 aa5.62□□□□□ -1.51
ERG9YHR190W HSE1P38753 452 aa5.62□□□□□ -1.51
ERG9YHR190W ELA1P53861 379 aaPredicted RBP5.62□□□□□ -1.51
ERG9YHR190W SDH1Q00711 640 aa5.62□□□□□ -1.51
ERG9YHR190W PHO4P07270 312 aaKnown RBP5.61□□□□□ -1.51
ERG9YHR190W GCD1P09032 578 aaPredicted RBP5.61□□□□□ -1.51
ERG9YHR190W TY1A-LR4P0C2I8 440 aaKnown RBP5.61□□□□□ -1.51
ERG9YHR190W TY1A-DR6P0CX70 440 aa5.61□□□□□ -1.51
ERG9YHR190W TY1A-ER1P0CX71 440 aa5.61□□□□□ -1.51
ERG9YHR190W TY1A-LR2P0CX72 440 aa5.61□□□□□ -1.51
ERG9YHR190W TY1A-PLP0CX73 440 aa5.61□□□□□ -1.51
ERG9YHR190W TY1A-JR1P0CX74 440 aa5.61□□□□□ -1.51
ERG9YHR190W TY1A-LR3P0CX75 440 aa5.61□□□□□ -1.51
ERG9YHR190W TY1A-ML2P0CX76 440 aa5.61□□□□□ -1.51
ERG9YHR190W PRP40P33203 583 aaKnown RBP5.61□□□□□ -1.51
ERG9YHR190W SLD2P34252 453 aa5.61□□□□□ -1.51
ERG9YHR190W EXO5P38289 585 aa5.61□□□□□ -1.51
ERG9YHR190W THI12P42883 340 aa5.61□□□□□ -1.51
ERG9YHR190W THI5P43534 340 aa5.61□□□□□ -1.51
ERG9YHR190W RSM26P47141 266 aa5.61□□□□□ -1.51
ERG9YHR190W THI11P47183 340 aa5.61□□□□□ -1.51
ERG9YHR190W AOS1Q06624 347 aa5.61□□□□□ -1.51
ERG9YHR190W THI13Q07748 340 aa5.61□□□□□ -1.51
ERG9YHR190W LAP2Q10740 671 aa5.61□□□□□ -1.51
ERG9YHR190W TY1A-GR1Q12085 440 aa5.61□□□□□ -1.51
ERG9YHR190W TY1A-PR3Q6Q5H1 440 aaKnown RBP5.61□□□□□ -1.51
ERG9YHR190W TY1A-OLQ92392 440 aaKnown RBP5.61□□□□□ -1.51
ERG9YHR190W VMA4P22203 233 aaKnown RBP5.6□□□□□ -1.51
ERG9YHR190W ADP1P25371 1049 aa5.6□□□□□ -1.51
ERG9YHR190W OYE3P41816 400 aaPredicted RBP5.6□□□□□ -1.51
ERG9YHR190W ECL1P48235 211 aa5.6□□□□□ -1.51
ERG9YHR190W DAL4Q04895 635 aa5.6□□□□□ -1.51
ERG9YHR190W ELM1P32801 640 aa5.59□□□□□ -1.51
ERG9YHR190W YAR028WP39548 234 aa5.59□□□□□ -1.51
ERG9YHR190W PEX13P80667 386 aa5.59□□□□□ -1.51
ERG9YHR190W TRE1Q08919 783 aa5.59□□□□□ -1.51
ERG9YHR190W MSH3P25336 1018 aa5.58□□□□□ -1.52
ERG9YHR190W POL12P38121 705 aaPredicted RBP5.58□□□□□ -1.52
ERG9YHR190W SLS1P42900 643 aa5.58□□□□□ -1.52
ERG9YHR190W YVC1Q12324 675 aa5.58□□□□□ -1.52
ERG9YHR190W MET4P32389 672 aa5.57□□□□□ -1.52
ERG9YHR190W DAK2P43550 591 aa5.57□□□□□ -1.52
ERG9YHR190W ULP1Q02724 621 aa5.57□□□□□ -1.52
ERG9YHR190W NEM1P38757 446 aa5.56□□□□□ -1.52
ERG9YHR190W PUS7Q08647 676 aaKnown RBP5.56□□□□□ -1.52
ERG9YHR190W HRK1Q08732 759 aaKnown RBP5.56□□□□□ -1.52
ERG9YHR190W DFG16Q99234 619 aa5.56□□□□□ -1.52
ERG9YHR190W SCP160P06105 1222 aaKnown RBP RIP-Chip data5.55□□□□□ -1.52 RIP-Chip
ERG9YHR190W HSP78P33416 811 aa5.55□□□□□ -1.52
ERG9YHR190W TPP1Q03796 238 aa5.55□□□□□ -1.52
ERG9YHR190W UTP5Q04177 643 aaKnown RBP5.55□□□□□ -1.52
ERG9YHR190W RET1P22276 1149 aaKnown RBP5.54□□□□□ -1.52
ERG9YHR190W PEX28P38848 579 aa5.54□□□□□ -1.52
ERG9YHR190W NIT1P40447 199 aa5.54□□□□□ -1.52
ERG9YHR190W XKS1P42826 600 aa5.54□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 60.6 ms