RNA–Protein interactions for RNA: YHR098C

SFB3, Transcript of Component of the Sec23p-Sfb3p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB3, Length 2,790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB3YHR098C RIM20Q12033 661 aa6.29□□□□□ -1.4
SFB3YHR098C RAD1P06777 1100 aa6.29□□□□□ -1.4
SFB3YHR098C RAD24P32641 659 aa6.29□□□□□ -1.4
SFB3YHR098C YPT11P48559 417 aa6.29□□□□□ -1.4
SFB3YHR098C RCM1P53972 490 aa6.29□□□□□ -1.4
SFB3YHR098C STE23Q06010 1027 aa6.29□□□□□ -1.4
SFB3YHR098C RDS2P19541 446 aaKnown RBP6.29□□□□□ -1.4
SFB3YHR098C YKR018CP36114 725 aa6.29□□□□□ -1.4
SFB3YHR098C CDC27P38042 758 aa6.29□□□□□ -1.4
SFB3YHR098C MIC19P43594 170 aa6.29□□□□□ -1.4
SFB3YHR098C MAL13P53338 473 aa6.29□□□□□ -1.4
SFB3YHR098C VPS75P53853 264 aa6.29□□□□□ -1.4
SFB3YHR098C TYW1Q08960 810 aaKnown RBP6.29□□□□□ -1.4
SFB3YHR098C YRF1-2P40105 1681 aa6.28□□□□□ -1.4
SFB3YHR098C PDB1P32473 366 aaKnown RBP6.28□□□□□ -1.4
SFB3YHR098C GCD7P32502 381 aaPredicted RBP6.28□□□□□ -1.4
SFB3YHR098C MAL33P38157 468 aa6.28□□□□□ -1.4
SFB3YHR098C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.28□□□□□ -1.4not detected
SFB3YHR098C HUL5P53119 910 aa6.28□□□□□ -1.4
SFB3YHR098C BRE1Q07457 700 aaKnown RBP6.28□□□□□ -1.4
SFB3YHR098C TMA16Q08687 178 aa6.28□□□□□ -1.4
SFB3YHR098C YPR204WQ08995 1032 aa6.28□□□□□ -1.4
SFB3YHR098C YOL098CQ12496 1037 aa6.28□□□□□ -1.4
SFB3YHR098C URB1P34241 1764 aaKnown RBP6.28□□□□□ -1.4
SFB3YHR098C RTG2P32608 588 aaKnown RBP6.28□□□□□ -1.4
SFB3YHR098C TYS1P36421 394 aaKnown RBP6.28□□□□□ -1.4
SFB3YHR098C PTC4P38089 393 aa6.28□□□□□ -1.4
SFB3YHR098C TFG2P41896 400 aaPredicted RBP6.28□□□□□ -1.4
SFB3YHR098C CUS1Q02554 436 aaPredicted RBP6.28□□□□□ -1.4
SFB3YHR098C APL5Q08951 932 aaKnown RBP6.28□□□□□ -1.4
SFB3YHR098C GAL11P19659 1081 aa6.27□□□□□ -1.41
SFB3YHR098C RPA135P22138 1203 aaKnown RBP6.27□□□□□ -1.41
SFB3YHR098C ARG1P22768 420 aa6.27□□□□□ -1.41
SFB3YHR098C PEP12P32854 288 aa6.27□□□□□ -1.41
SFB3YHR098C INP52P50942 1183 aa6.27□□□□□ -1.41
SFB3YHR098C SUB1P54000 292 aaKnown RBP6.27□□□□□ -1.41
SFB3YHR098C ELG1Q12050 791 aa6.27□□□□□ -1.41
SFB3YHR098C YPL150WQ12152 901 aa6.27□□□□□ -1.41
SFB3YHR098C TY4A-HQ6Q5P6 413 aa6.27□□□□□ -1.41
SFB3YHR098C ADE6P38972 1358 aaKnown RBP6.27□□□□□ -1.41
SFB3YHR098C TY1B-AO13527 1196 aaKnown RBP6.27□□□□□ -1.41
SFB3YHR098C JIP3O13555 125 aa6.27□□□□□ -1.41
SFB3YHR098C PDC1P06169 563 aaKnown RBP6.27□□□□□ -1.41
SFB3YHR098C RAD16P31244 790 aa6.27□□□□□ -1.41
SFB3YHR098C ALG12P53730 551 aa6.27□□□□□ -1.41
SFB3YHR098C DPL1Q05567 589 aa6.27□□□□□ -1.41
SFB3YHR098C ENO1P00924 437 aaKnown RBP6.26□□□□□ -1.41
SFB3YHR098C LEU2P04173 364 aaPredicted RBP6.26□□□□□ -1.41
SFB3YHR098C PHO87P25360 923 aa6.26□□□□□ -1.41
SFB3YHR098C YSW1P38280 609 aa6.26□□□□□ -1.41
SFB3YHR098C STS1P38637 319 aa6.26□□□□□ -1.41
SFB3YHR098C TOM71P38825 639 aaKnown RBP6.26□□□□□ -1.41
SFB3YHR098C MRX1P40050 688 aa6.26□□□□□ -1.41
SFB3YHR098C BET4Q00618 327 aa6.26□□□□□ -1.41
SFB3YHR098C PPH3P32345 308 aa6.26□□□□□ -1.41
SFB3YHR098C AKL1P38080 1108 aaKnown RBP6.26□□□□□ -1.41
SFB3YHR098C VID28P40547 921 aa6.26□□□□□ -1.41
SFB3YHR098C TRS85P46944 698 aa6.26□□□□□ -1.41
SFB3YHR098C YJR107WP47145 328 aa6.26□□□□□ -1.41
SFB3YHR098C ILM1P47155 203 aa6.26□□□□□ -1.41
SFB3YHR098C ITT1Q04638 464 aa6.26□□□□□ -1.41
SFB3YHR098C EIS1Q05050 843 aaKnown RBP6.26□□□□□ -1.41
SFB3YHR098C NFI1Q12216 726 aa6.26□□□□□ -1.41
SFB3YHR098C YBL113CQ7M4S9 792 aa6.26□□□□□ -1.41
SFB3YHR098C CDC37P06101 506 aaKnown RBP6.25□□□□□ -1.41
SFB3YHR098C YEL043WP32618 956 aa6.25□□□□□ -1.41
SFB3YHR098C NNF1P47149 201 aa6.25□□□□□ -1.41
SFB3YHR098C BOP3P53958 396 aa6.25□□□□□ -1.41
SFB3YHR098C CIR2Q08822 631 aa6.25□□□□□ -1.41
SFB3YHR098C APC1P53886 1748 aa6.25□□□□□ -1.41
SFB3YHR098C SSA2P10592 639 aaKnown RBP6.25□□□□□ -1.41
SFB3YHR098C RAD53P22216 821 aa6.25□□□□□ -1.41
SFB3YHR098C SWC3P31376 625 aa6.25□□□□□ -1.41
SFB3YHR098C EPS1P40557 701 aa6.25□□□□□ -1.41
SFB3YHR098C YNL108CP53929 270 aa6.25□□□□□ -1.41
SFB3YHR098C RPL34AP87262 121 aaPredicted RBP6.25□□□□□ -1.41
SFB3YHR098C STE20Q03497 939 aaKnown RBP6.25□□□□□ -1.41
SFB3YHR098C YLL054CQ12244 843 aa6.25□□□□□ -1.41
SFB3YHR098C SEC8P32855 1065 aa6.24□□□□□ -1.41
SFB3YHR098C SEC66P33754 206 aa6.24□□□□□ -1.41
SFB3YHR098C CCC2P38995 1004 aa6.24□□□□□ -1.41
SFB3YHR098C YOL057WQ08225 711 aa6.24□□□□□ -1.41
SFB3YHR098C PHO13P19881 312 aa6.24□□□□□ -1.41
SFB3YHR098C CLB4P24871 460 aa6.24□□□□□ -1.41
SFB3YHR098C VPS8P39702 1274 aa6.24□□□□□ -1.41
SFB3YHR098C SPR3P41901 512 aa6.24□□□□□ -1.41
SFB3YHR098C VPS53P47061 822 aa6.24□□□□□ -1.41
SFB3YHR098C VPS38Q05919 439 aa6.24□□□□□ -1.41
SFB3YHR098C OSH2Q12451 1283 aa6.24□□□□□ -1.41
SFB3YHR098C ENO2P00925 437 aaKnown RBP6.23□□□□□ -1.41
SFB3YHR098C MAK16P10962 306 aaPredicted RBP6.23□□□□□ -1.41
SFB3YHR098C TPM1P17536 199 aaKnown RBP6.23□□□□□ -1.41
SFB3YHR098C BDF1P35817 686 aa6.23□□□□□ -1.41
SFB3YHR098C TGL4P36165 910 aa6.23□□□□□ -1.41
SFB3YHR098C RIM21P48565 533 aa6.23□□□□□ -1.41
SFB3YHR098C YLR177WQ06251 628 aa6.23□□□□□ -1.41
SFB3YHR098C GAS4Q08271 471 aa6.23□□□□□ -1.41
SFB3YHR098C PDR18P53756 1333 aa6.23□□□□□ -1.41
SFB3YHR098C SSD1P24276 1250 aaKnown RBP RIP-Chip data6.23□□□□□ -1.41not detected
SFB3YHR098C YDJ1P25491 409 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 12 ms