RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C SLK19Q08581 821 aaKnown RBP3.45□□□□□ -1.86
RPN1YHR027C CTI6Q08923 506 aa3.45□□□□□ -1.86
RPN1YHR027C TFB4Q12004 338 aa3.45□□□□□ -1.86
RPN1YHR027C VTH2P40890 1549 aa3.45□□□□□ -1.86
RPN1YHR027C CDC31P06704 161 aaKnown RBP3.45□□□□□ -1.86
RPN1YHR027C SUI3P09064 285 aaKnown RBP3.45□□□□□ -1.86
RPN1YHR027C RNR2P09938 399 aaKnown RBP3.45□□□□□ -1.86
RPN1YHR027C HMG1P12683 1054 aa3.45□□□□□ -1.86
RPN1YHR027C RPO26P20435 155 aa3.45□□□□□ -1.86
RPN1YHR027C MSM1P22438 575 aa3.45□□□□□ -1.86
RPN1YHR027C NPL4P33755 580 aa3.45□□□□□ -1.86
RPN1YHR027C TFC3P34111 1160 aa3.45□□□□□ -1.86
RPN1YHR027C AMN1P38285 549 aaPredicted RBP3.45□□□□□ -1.86
RPN1YHR027C CCT4P39078 528 aaKnown RBP3.45□□□□□ -1.86
RPN1YHR027C SPC72P39723 622 aa3.45□□□□□ -1.86
RPN1YHR027C CCT5P40413 562 aaKnown RBP3.45□□□□□ -1.86
RPN1YHR027C YJR079WP47126 109 aa3.45□□□□□ -1.86
RPN1YHR027C ECL1P48235 211 aa3.45□□□□□ -1.86
RPN1YHR027C MAL13P53338 473 aa3.45□□□□□ -1.86
RPN1YHR027C DSL1P53847 754 aa3.45□□□□□ -1.86
RPN1YHR027C RIA1P53893 1110 aa3.45□□□□□ -1.86
RPN1YHR027C PLP1Q04004 230 aa3.45□□□□□ -1.86
RPN1YHR027C EIS1Q05050 843 aaKnown RBP3.45□□□□□ -1.86
RPN1YHR027C TRS33Q99394 268 aa3.45□□□□□ -1.86
RPN1YHR027C GCD2P12754 651 aaPredicted RBP3.44□□□□□ -1.86
RPN1YHR027C TAL1P15019 335 aaKnown RBP3.44□□□□□ -1.86
RPN1YHR027C UBC1P21734 215 aaKnown RBP3.44□□□□□ -1.86
RPN1YHR027C DPB3P27344 201 aa3.44□□□□□ -1.86
RPN1YHR027C UBP13P38187 747 aa3.44□□□□□ -1.86
RPN1YHR027C YIL001WP40560 513 aa3.44□□□□□ -1.86
RPN1YHR027C HUL4P40985 892 aa3.44□□□□□ -1.86
RPN1YHR027C SET2P46995 733 aaKnown RBP3.44□□□□□ -1.86
RPN1YHR027C ARI1P53111 347 aaKnown RBP3.44□□□□□ -1.86
RPN1YHR027C LSC1P53598 329 aaKnown RBP3.44□□□□□ -1.86
RPN1YHR027C FAR11P53917 953 aa3.44□□□□□ -1.86
RPN1YHR027C MSH6Q03834 1242 aa3.44□□□□□ -1.86
RPN1YHR027C THI22Q06490 572 aa3.44□□□□□ -1.86
RPN1YHR027C ARR2Q06597 130 aa3.44□□□□□ -1.86
RPN1YHR027C MPC54Q08550 464 aa3.44□□□□□ -1.86
RPN1YHR027C YIG1Q08956 461 aa3.44□□□□□ -1.86
RPN1YHR027C PDR1P12383 1068 aa3.44□□□□□ -1.86
RPN1YHR027C TYR1P20049 452 aa3.44□□□□□ -1.86
RPN1YHR027C HCS1P34243 683 aa3.44□□□□□ -1.86
RPN1YHR027C SAK1P38990 1142 aa3.44□□□□□ -1.86
RPN1YHR027C VID27P40157 782 aa3.44□□□□□ -1.86
RPN1YHR027C AIM21P40563 679 aa3.44□□□□□ -1.86
RPN1YHR027C POL31P46957 487 aa3.44□□□□□ -1.86
RPN1YHR027C RBL2P48606 106 aaKnown RBP3.44□□□□□ -1.86
RPN1YHR027C COP1P53622 1201 aaKnown RBP3.44□□□□□ -1.86
RPN1YHR027C HXT17P53631 564 aa3.44□□□□□ -1.86
RPN1YHR027C BNI5P53890 448 aaKnown RBP3.44□□□□□ -1.86
RPN1YHR027C YML108WQ03759 105 aa3.44□□□□□ -1.86
RPN1YHR027C ERB1Q04660 807 aaKnown RBP3.44□□□□□ -1.86
RPN1YHR027C YLH47Q06493 454 aa3.44□□□□□ -1.86
RPN1YHR027C PSK2Q08217 1101 aa3.44□□□□□ -1.86
RPN1YHR027C PCL8Q08966 492 aa3.44□□□□□ -1.86
RPN1YHR027C PET494P07390 489 aaPredicted RBP3.43□□□□□ -1.86
RPN1YHR027C SSA4P22202 642 aaKnown RBP3.43□□□□□ -1.86
RPN1YHR027C ARG1P22768 420 aa3.43□□□□□ -1.86
RPN1YHR027C UGA3P26370 528 aa3.43□□□□□ -1.86
RPN1YHR027C ATO2P32907 282 aa3.43□□□□□ -1.86
RPN1YHR027C BUD2P33314 1104 aa3.43□□□□□ -1.86
RPN1YHR027C SSZ1P38788 538 aaKnown RBP3.43□□□□□ -1.86
RPN1YHR027C MRX1P40050 688 aa3.43□□□□□ -1.86
RPN1YHR027C STR2P47164 639 aa3.43□□□□□ -1.86
RPN1YHR027C MEH1Q02205 184 aa3.43□□□□□ -1.86
RPN1YHR027C ISW2Q08773 1120 aa3.43□□□□□ -1.86
RPN1YHR027C HTZ1Q12692 134 aaKnown RBP3.43□□□□□ -1.86
RPN1YHR027C RAD5P32849 1169 aaPredicted RBP3.43□□□□□ -1.86
RPN1YHR027C RIB7P33312 244 aa3.43□□□□□ -1.86
RPN1YHR027C MET18P40469 1032 aa3.43□□□□□ -1.86
RPN1YHR027C GCD14P46959 383 aaPredicted RBP3.43□□□□□ -1.86
RPN1YHR027C HOS2P53096 452 aaPredicted RBP3.43□□□□□ -1.86
RPN1YHR027C CAF130P53280 1122 aaPredicted RBP3.43□□□□□ -1.86
RPN1YHR027C REX2P54964 269 aaKnown RBP3.43□□□□□ -1.86
RPN1YHR027C TFB2Q02939 513 aa3.43□□□□□ -1.86
RPN1YHR027C GDE1Q02979 1223 aa3.43□□□□□ -1.86
RPN1YHR027C RBA50Q04418 439 aa3.43□□□□□ -1.86
RPN1YHR027C YMR111CQ04461 462 aaPredicted RBP3.43□□□□□ -1.86
RPN1YHR027C HMI1Q12039 706 aa3.43□□□□□ -1.86
RPN1YHR027C TSR3Q12094 313 aaKnown RBP3.43□□□□□ -1.86
RPN1YHR027C YPR089WO13585 888 aa3.42□□□□□ -1.86
RPN1YHR027C VAS1P07806 1104 aaKnown RBP3.42□□□□□ -1.86
RPN1YHR027C STE6P12866 1290 aa3.42□□□□□ -1.86
RPN1YHR027C ASF1P32447 279 aa3.42□□□□□ -1.86
RPN1YHR027C COY1P34237 679 aa3.42□□□□□ -1.86
RPN1YHR027C PCH2P38126 564 aa3.42□□□□□ -1.86
RPN1YHR027C UBP12P39538 1254 aa3.42□□□□□ -1.86
RPN1YHR027C ARB1P40024 610 aaKnown RBP3.42□□□□□ -1.86
RPN1YHR027C NOP15P53927 220 aaPredicted RBP3.42□□□□□ -1.86
RPN1YHR027C YKR005CQ02203 525 aa3.42□□□□□ -1.86
RPN1YHR027C TAF8Q03750 510 aa3.42□□□□□ -1.86
RPN1YHR027C YOR296WQ08748 1289 aa3.42□□□□□ -1.86
RPN1YHR027C APL4Q12028 832 aa3.42□□□□□ -1.86
RPN1YHR027C RUD3Q12234 484 aaKnown RBP3.42□□□□□ -1.86
RPN1YHR027C SEC15P22224 910 aa3.42□□□□□ -1.86
RPN1YHR027C RPC19P28000 142 aaKnown RBP3.42□□□□□ -1.86
RPN1YHR027C PAP1P29468 568 aaKnown RBP3.42□□□□□ -1.86
RPN1YHR027C TAF5P38129 798 aa3.42□□□□□ -1.86
RPN1YHR027C PPX1P38698 397 aa3.42□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 173.3 ms