RNA–Protein interactions for RNA: YGR247W

CPD1, Transcript of Cyclic nucleotide phosphodiesterase, yeastyeast

Gene CPD1, Length 720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPD1YGR247W HIP1P06775 603 aa10.74□□□□□ -0.69
CPD1YGR247W RAD18P10862 487 aa10.74□□□□□ -0.69
CPD1YGR247W RMD1Q03441 430 aa10.74□□□□□ -0.69
CPD1YGR247W RAD61Q99359 647 aa10.74□□□□□ -0.69
CPD1YGR247W PDR18P53756 1333 aa10.74□□□□□ -0.69
CPD1YGR247W ECM29P38737 1868 aa10.74□□□□□ -0.69
CPD1YGR247W MIP1P15801 1254 aa10.73□□□□□ -0.69
CPD1YGR247W CHS3P29465 1165 aa10.73□□□□□ -0.69
CPD1YGR247W PBY1P38254 753 aa10.73□□□□□ -0.69
CPD1YGR247W FPR3P38911 411 aaKnown RBP10.73□□□□□ -0.69
CPD1YGR247W NOC2P39744 710 aaKnown RBP10.73□□□□□ -0.69
CPD1YGR247W VID27P40157 782 aa10.73□□□□□ -0.69
CPD1YGR247W HEM1P09950 548 aaPredicted RBP10.72□□□□□ -0.69
CPD1YGR247W YHL050CP38721 697 aa10.72□□□□□ -0.69
CPD1YGR247W SKP2P42843 763 aa10.72□□□□□ -0.69
CPD1YGR247W BDP1P46678 594 aa10.72□□□□□ -0.69
CPD1YGR247W MRD1Q06106 887 aaKnown RBP10.72□□□□□ -0.69
CPD1YGR247W MSC6Q08818 692 aaKnown RBP10.72□□□□□ -0.69
CPD1YGR247W SAM2P19358 384 aaKnown RBP10.71□□□□□ -0.69
CPD1YGR247W TFA1P36100 482 aa10.71□□□□□ -0.69
CPD1YGR247W ECM21P38167 1117 aaKnown RBP10.71□□□□□ -0.69
CPD1YGR247W VPS29P38759 282 aa10.71□□□□□ -0.69
CPD1YGR247W SLN1P39928 1220 aaPredicted RBP10.71□□□□□ -0.69
CPD1YGR247W LDB19Q12502 818 aa10.71□□□□□ -0.69
CPD1YGR247W GRS1P38088 690 aaKnown RBP10.7□□□□□ -0.7
CPD1YGR247W VPS53P47061 822 aa10.7□□□□□ -0.7
CPD1YGR247W TAH18Q12181 623 aa10.7□□□□□ -0.7
CPD1YGR247W PDC1P06169 563 aaKnown RBP10.69□□□□□ -0.7
CPD1YGR247W SAM1P10659 382 aaKnown RBP10.69□□□□□ -0.7
CPD1YGR247W PHO88P38264 188 aaPredicted RBP10.69□□□□□ -0.7
CPD1YGR247W OSH3P38713 996 aaKnown RBP10.69□□□□□ -0.7
CPD1YGR247W NMD2P38798 1089 aaKnown RBP10.69□□□□□ -0.7
CPD1YGR247W PES4P39684 611 aa10.69□□□□□ -0.7
CPD1YGR247W VPS8P39702 1274 aa10.69□□□□□ -0.7
CPD1YGR247W BBC1P47068 1157 aa10.69□□□□□ -0.7
CPD1YGR247W SLD5Q03406 294 aa10.69□□□□□ -0.7
CPD1YGR247W CSC1Q06538 782 aa10.69□□□□□ -0.7
CPD1YGR247W YDR034W-BQ6Q5X2 51 aa10.69□□□□□ -0.7
CPD1YGR247W COQ1P18900 473 aa10.68□□□□□ -0.7
CPD1YGR247W TGL1P34163 548 aa10.68□□□□□ -0.7
CPD1YGR247W RRP8P38961 392 aaKnown RBP10.68□□□□□ -0.7
CPD1YGR247W UBP9P39967 754 aa10.68□□□□□ -0.7
CPD1YGR247W PKH3Q03306 898 aaPredicted RBP10.68□□□□□ -0.7
CPD1YGR247W PUF6Q04373 656 aaKnown RBP10.68□□□□□ -0.7
CPD1YGR247W YDR524C-BQ3E6R4 66 aa10.68□□□□□ -0.7
CPD1YGR247W YUR1P26725 428 aa10.67□□□□□ -0.7
CPD1YGR247W TIM23P32897 222 aa10.67□□□□□ -0.7
CPD1YGR247W PIB2P53191 635 aa10.67□□□□□ -0.7
CPD1YGR247W LAM4P38800 1345 aa10.66□□□□□ -0.7
CPD1YGR247W POX1P13711 748 aa10.66□□□□□ -0.7
CPD1YGR247W MCM4P30665 933 aaKnown RBP10.66□□□□□ -0.7
CPD1YGR247W DAK1P54838 584 aaKnown RBP10.66□□□□□ -0.7
CPD1YGR247W TMA64Q04600 565 aaKnown RBP10.66□□□□□ -0.7
CPD1YGR247W SPH1Q06160 661 aa10.66□□□□□ -0.7
CPD1YGR247W ACE2P21192 770 aa10.65□□□□□ -0.7
CPD1YGR247W SHP1P34223 423 aa10.65□□□□□ -0.7
CPD1YGR247W GPT2P36148 743 aa10.65□□□□□ -0.7
CPD1YGR247W ERP3Q12403 225 aa10.65□□□□□ -0.7
CPD1YGR247W RTP1Q12751 981 aa10.65□□□□□ -0.7
CPD1YGR247W IRE1P32361 1115 aa10.64□□□□□ -0.71
CPD1YGR247W TFC4P33339 1025 aa10.64□□□□□ -0.71
CPD1YGR247W YGL039WP53183 348 aaKnown RBP10.64□□□□□ -0.71
CPD1YGR247W TRM11Q12463 433 aa10.64□□□□□ -0.71
CPD1YGR247W CHO2P05374 869 aaKnown RBP10.63□□□□□ -0.71
CPD1YGR247W MCR1P36060 302 aaKnown RBP10.63□□□□□ -0.71
CPD1YGR247W SCS3P53012 380 aa10.63□□□□□ -0.71
CPD1YGR247W RPS15Q01855 142 aaKnown RBP10.63□□□□□ -0.71
CPD1YGR247W DUS3Q06053 668 aaKnown RBP10.63□□□□□ -0.71
CPD1YGR247W BRE1Q07457 700 aaKnown RBP10.63□□□□□ -0.71
CPD1YGR247W ISA1Q07821 250 aaPredicted RBP10.63□□□□□ -0.71
CPD1YGR247W OPI1P21957 404 aa10.62□□□□□ -0.71
CPD1YGR247W PRO3P32263 286 aaKnown RBP10.62□□□□□ -0.71
CPD1YGR247W SEC8P32855 1065 aa10.62□□□□□ -0.71
CPD1YGR247W DBP7P36120 742 aaKnown RBP10.62□□□□□ -0.71
CPD1YGR247W YHR131CP38835 850 aa10.62□□□□□ -0.71
CPD1YGR247W POL32P47110 350 aa10.62□□□□□ -0.71
CPD1YGR247W FOL2P51601 243 aaKnown RBP10.62□□□□□ -0.71
CPD1YGR247W MRPS35P53292 345 aa10.62□□□□□ -0.71
CPD1YGR247W FOL1P53848 824 aa10.62□□□□□ -0.71
CPD1YGR247W TKL1P23254 680 aaKnown RBP10.61□□□□□ -0.71
CPD1YGR247W KTR1P27810 393 aaKnown RBP10.61□□□□□ -0.71
CPD1YGR247W MET1P36150 593 aa10.61□□□□□ -0.71
CPD1YGR247W VPS45P38932 577 aa10.61□□□□□ -0.71
CPD1YGR247W JHD1P40034 492 aa10.61□□□□□ -0.71
CPD1YGR247W RSC8P43609 557 aaKnown RBP10.61□□□□□ -0.71
CPD1YGR247W VPS30Q02948 557 aa10.61□□□□□ -0.71
CPD1YGR247W ISW2Q08773 1120 aa10.61□□□□□ -0.71
CPD1YGR247W YDR461C-AQ2V2P7 80 aa10.61□□□□□ -0.71
CPD1YGR247W MCM6P53091 1017 aaKnown RBP10.6□□□□□ -0.71
CPD1YGR247W UFD2P54860 961 aa10.6□□□□□ -0.71
CPD1YGR247W YMR321CQ04898 105 aa10.6□□□□□ -0.71
CPD1YGR247W GUD1Q07729 489 aa10.6□□□□□ -0.71
CPD1YGR247W RIT1P23796 513 aa10.59□□□□□ -0.71
CPD1YGR247W POT1P27796 417 aaKnown RBP RIP-Chip data10.59□□□□□ -0.71not detected
CPD1YGR247W REG2P38232 338 aa10.59□□□□□ -0.71
CPD1YGR247W UTP4Q06679 776 aaKnown RBP10.59□□□□□ -0.71
CPD1YGR247W NUC1P08466 329 aa10.58□□□□□ -0.72
CPD1YGR247W SNA3P14359 133 aa10.58□□□□□ -0.72
CPD1YGR247W MYO3P36006 1272 aa10.58□□□□□ -0.72
CPD1YGR247W VPS72Q03388 795 aa10.58□□□□□ -0.72
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms