RNA–Protein interactions for RNA: YGR193C

PDX1, Transcript of E3-binding protein of the mitochondrial pyruvate dehydrogenase complex, yeastyeast

Gene PDX1, Length 1,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDX1YGR193C YTA7P40340 1379 aa4.52□□□□□ -1.69
PDX1YGR193C HSP82P02829 709 aaKnown RBP4.51□□□□□ -1.69
PDX1YGR193C GPT2P36148 743 aa4.51□□□□□ -1.69
PDX1YGR193C NIT1P40447 199 aa4.51□□□□□ -1.69
PDX1YGR193C CTR9P89105 1077 aa4.51□□□□□ -1.69
PDX1YGR193C YMR074CQ04773 145 aa4.51□□□□□ -1.69
PDX1YGR193C PLP2Q12017 286 aa4.51□□□□□ -1.69
PDX1YGR193C COBP00163 385 aa4.5□□□□□ -1.69
PDX1YGR193C SMC1P32908 1225 aa4.5□□□□□ -1.69
PDX1YGR193C GEF1P37020 779 aa4.5□□□□□ -1.69
PDX1YGR193C MMM1P41800 426 aa4.5□□□□□ -1.69
PDX1YGR193C MPP10P47083 593 aaKnown RBP4.5□□□□□ -1.69
PDX1YGR193C ECL1P48235 211 aa4.5□□□□□ -1.69
PDX1YGR193C BUD21Q08492 214 aaPredicted RBP4.5□□□□□ -1.69
PDX1YGR193C YOR223WQ12015 292 aa4.5□□□□□ -1.69
PDX1YGR193C SSA1P10591 642 aaKnown RBP4.49□□□□□ -1.69
PDX1YGR193C GAS1P22146 559 aaKnown RBP4.49□□□□□ -1.69
PDX1YGR193C SSA4P22202 642 aaKnown RBP4.49□□□□□ -1.69
PDX1YGR193C SPC42P36094 363 aa4.48□□□□□ -1.69
PDX1YGR193C YHL008CP38750 627 aa4.48□□□□□ -1.69
PDX1YGR193C SSF1P38789 453 aaPredicted RBP4.48□□□□□ -1.69
PDX1YGR193C RPT2P40327 437 aaKnown RBP4.48□□□□□ -1.69
PDX1YGR193C CIT3P43635 486 aa4.48□□□□□ -1.69
PDX1YGR193C TLG1Q03322 224 aa4.48□□□□□ -1.69
PDX1YGR193C DOT1Q04089 582 aaKnown RBP4.48□□□□□ -1.69
PDX1YGR193C DUR3P33413 735 aa4.47□□□□□ -1.69
PDX1YGR193C HSP78P33416 811 aa4.47□□□□□ -1.69
PDX1YGR193C MET10P39692 1035 aa4.47□□□□□ -1.69
PDX1YGR193C OYE3P41816 400 aaPredicted RBP4.47□□□□□ -1.69
PDX1YGR193C TY4A-JP47023 414 aa4.47□□□□□ -1.69
PDX1YGR193C JSN1P47135 1091 aaKnown RBP RIP-Chip data4.47□□□□□ -1.69not detected
PDX1YGR193C FUR4P05316 633 aaKnown RBP4.46□□□□□ -1.7
PDX1YGR193C RNA1P11745 407 aaKnown RBP4.46□□□□□ -1.7
PDX1YGR193C YCR015CP25616 317 aa4.46□□□□□ -1.7
PDX1YGR193C TSA1P34760 196 aaKnown RBP4.46□□□□□ -1.7
PDX1YGR193C RIM11P38615 370 aa4.46□□□□□ -1.7
PDX1YGR193C YJR008WP47085 338 aa4.46□□□□□ -1.7
PDX1YGR193C ZDS1P50111 915 aaKnown RBP4.46□□□□□ -1.7
PDX1YGR193C RCM1P53972 490 aa4.46□□□□□ -1.7
PDX1YGR193C CDA2Q06703 312 aa4.46□□□□□ -1.7
PDX1YGR193C HOS4P40480 1083 aa4.45□□□□□ -1.7
PDX1YGR193C GCV1P48015 400 aa4.45□□□□□ -1.7
PDX1YGR193C ENV11P53246 860 aa4.45□□□□□ -1.7
PDX1YGR193C EAR1Q03212 550 aa4.45□□□□□ -1.7
PDX1YGR193C BRE1Q07457 700 aaKnown RBP4.45□□□□□ -1.7
PDX1YGR193C YIG1Q08956 461 aa4.45□□□□□ -1.7
PDX1YGR193C NSI1Q12457 570 aa4.45□□□□□ -1.7
PDX1YGR193C CMR1Q12510 522 aaKnown RBP4.45□□□□□ -1.7
PDX1YGR193C RAD2P07276 1031 aa4.44□□□□□ -1.7
PDX1YGR193C TAF1P46677 1066 aa4.44□□□□□ -1.7
PDX1YGR193C YOR059CQ08448 450 aaKnown RBP4.44□□□□□ -1.7
PDX1YGR193C QCR6P00127 147 aa4.43□□□□□ -1.7
PDX1YGR193C RPS4AP0CX35 261 aaKnown RBP4.43□□□□□ -1.7
PDX1YGR193C RPS4BP0CX36 261 aaKnown RBP4.43□□□□□ -1.7
PDX1YGR193C HSC82P15108 705 aaKnown RBP4.43□□□□□ -1.7
PDX1YGR193C NPR1P22211 790 aa4.43□□□□□ -1.7
PDX1YGR193C YKL222CP35995 705 aa4.43□□□□□ -1.7
PDX1YGR193C PAM1P37304 830 aaKnown RBP4.43□□□□□ -1.7
PDX1YGR193C PRP43P53131 767 aaKnown RBP4.43□□□□□ -1.7
PDX1YGR193C ESC8Q08119 714 aa4.43□□□□□ -1.7
PDX1YGR193C ALG6Q12001 544 aaKnown RBP4.43□□□□□ -1.7
PDX1YGR193C YLL054CQ12244 843 aa4.43□□□□□ -1.7
PDX1YGR193C HTS1P07263 546 aaKnown RBP4.42□□□□□ -1.7
PDX1YGR193C SLD2P34252 453 aa4.42□□□□□ -1.7
PDX1YGR193C MSH4P40965 878 aaPredicted RBP4.42□□□□□ -1.7
PDX1YGR193C TAF13P11747 167 aa4.41□□□□□ -1.7
PDX1YGR193C PRP5P21372 849 aaPredicted RBP4.41□□□□□ -1.7
PDX1YGR193C YAF9P53930 226 aa4.41□□□□□ -1.7
PDX1YGR193C GIR2Q03768 265 aaPredicted RBP4.41□□□□□ -1.7
PDX1YGR193C MFT1P33441 392 aaKnown RBP4.4□□□□□ -1.71
PDX1YGR193C THI80P35202 319 aa4.4□□□□□ -1.71
PDX1YGR193C ENP1P38333 483 aaKnown RBP4.4□□□□□ -1.71
PDX1YGR193C GLO3P38682 493 aaKnown RBP4.4□□□□□ -1.71
PDX1YGR193C OCA5P38738 679 aa4.4□□□□□ -1.71
PDX1YGR193C NMD2P38798 1089 aaKnown RBP4.4□□□□□ -1.71
PDX1YGR193C ALT1P52893 592 aa4.4□□□□□ -1.71
PDX1YGR193C SSY1Q03770 852 aa4.4□□□□□ -1.71
PDX1YGR193C FPR4Q06205 392 aaPredicted RBP4.4□□□□□ -1.71
PDX1YGR193C UBX5Q06682 500 aa4.4□□□□□ -1.71
PDX1YGR193C LPX1Q12405 387 aaKnown RBP4.4□□□□□ -1.71
PDX1YGR193C DAL5P15365 543 aa4.39□□□□□ -1.71
PDX1YGR193C GAL11P19659 1081 aa4.39□□□□□ -1.71
PDX1YGR193C REI1P38344 393 aaPredicted RBP4.39□□□□□ -1.71
PDX1YGR193C PEX7P39108 375 aa4.39□□□□□ -1.71
PDX1YGR193C RSC4Q02206 625 aa4.39□□□□□ -1.71
PDX1YGR193C MEC3Q02574 474 aa4.39□□□□□ -1.71
PDX1YGR193C YVC1Q12324 675 aa4.39□□□□□ -1.71
PDX1YGR193C TY1A-LR4P0C2I8 440 aaKnown RBP4.38□□□□□ -1.71
PDX1YGR193C TY1A-DR6P0CX70 440 aa4.38□□□□□ -1.71
PDX1YGR193C TY1A-ER1P0CX71 440 aa4.38□□□□□ -1.71
PDX1YGR193C TY1A-LR2P0CX72 440 aa4.38□□□□□ -1.71
PDX1YGR193C TY1A-PLP0CX73 440 aa4.38□□□□□ -1.71
PDX1YGR193C TY1A-JR1P0CX74 440 aa4.38□□□□□ -1.71
PDX1YGR193C TY1A-LR3P0CX75 440 aa4.38□□□□□ -1.71
PDX1YGR193C TY1A-ML2P0CX76 440 aa4.38□□□□□ -1.71
PDX1YGR193C ADP1P25371 1049 aa4.38□□□□□ -1.71
PDX1YGR193C SEC20P28791 383 aa4.38□□□□□ -1.71
PDX1YGR193C TOM20P35180 183 aa4.38□□□□□ -1.71
PDX1YGR193C FUN12P39730 1002 aaKnown RBP4.38□□□□□ -1.71
PDX1YGR193C GIP4P39732 760 aa4.38□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms