RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeastyeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC9YGR009C CLB5P30283 435 aa5.37□□□□□ -1.55
SEC9YGR009C PTR2P32901 601 aa5.37□□□□□ -1.55
SEC9YGR009C YHR020WP38708 688 aaKnown RBP5.37□□□□□ -1.55
SEC9YGR009C STN1P38960 494 aa5.37□□□□□ -1.55
SEC9YGR009C VAC8P39968 578 aa5.37□□□□□ -1.55
SEC9YGR009C SAP185P40856 1058 aa5.37□□□□□ -1.55
SEC9YGR009C NUP42P49686 430 aaKnown RBP5.37□□□□□ -1.55
SEC9YGR009C CWH41P53008 833 aa5.37□□□□□ -1.55
SEC9YGR009C SPO19Q03029 223 aa5.37□□□□□ -1.55
SEC9YGR009C HAS1Q03532 505 aaKnown RBP5.37□□□□□ -1.55
SEC9YGR009C SPC19Q03954 165 aa5.37□□□□□ -1.55
SEC9YGR009C RRN11Q04712 507 aa5.37□□□□□ -1.55
SEC9YGR009C MDM36Q06820 579 aa5.37□□□□□ -1.55
SEC9YGR009C NOC3Q07896 663 aaPredicted RBP5.37□□□□□ -1.55
SEC9YGR009C MSC6Q08818 692 aaKnown RBP5.37□□□□□ -1.55
SEC9YGR009C GAL1P04385 528 aa5.36□□□□□ -1.55
SEC9YGR009C LEU1P07264 779 aaKnown RBP5.36□□□□□ -1.55
SEC9YGR009C PIF1P07271 859 aa5.36□□□□□ -1.55
SEC9YGR009C GGA2P38817 585 aaKnown RBP5.36□□□□□ -1.55
SEC9YGR009C POP2P39008 433 aa5.36□□□□□ -1.55
SEC9YGR009C MET18P40469 1032 aa5.36□□□□□ -1.55
SEC9YGR009C ALG2P43636 503 aa5.36□□□□□ -1.55
SEC9YGR009C POL32P47110 350 aa5.36□□□□□ -1.55
SEC9YGR009C SPO1P53541 631 aa5.36□□□□□ -1.55
SEC9YGR009C ADE13Q05911 482 aaKnown RBP5.36□□□□□ -1.55
SEC9YGR009C MRN1Q08925 612 aaKnown RBP RIP-Chip data5.36□□□□□ -1.55not detected
SEC9YGR009C ATP4P05626 244 aa5.36□□□□□ -1.55
SEC9YGR009C STI1P15705 589 aaKnown RBP RIP-Chip data5.36□□□□□ -1.55not detected
SEC9YGR009C SEN2P16658 377 aa5.36□□□□□ -1.55
SEC9YGR009C GLK1P17709 500 aaKnown RBP5.36□□□□□ -1.55
SEC9YGR009C RME1P32338 300 aaKnown RBP5.36□□□□□ -1.55
SEC9YGR009C PBP2P38151 413 aaKnown RBP RIP-Chip data5.36□□□□□ -1.55not detected
SEC9YGR009C SLX1P38324 304 aa5.36□□□□□ -1.55
SEC9YGR009C PET100P38958 111 aa5.36□□□□□ -1.55
SEC9YGR009C APL6P46682 809 aa5.36□□□□□ -1.55
SEC9YGR009C YJL049WP47048 450 aa5.36□□□□□ -1.55
SEC9YGR009C YJL007CP47080 104 aa5.36□□□□□ -1.55
SEC9YGR009C YGR153WP48238 217 aa5.36□□□□□ -1.55
SEC9YGR009C EAF7P53911 425 aaKnown RBP5.36□□□□□ -1.55
SEC9YGR009C ADA2Q02336 434 aa5.36□□□□□ -1.55
SEC9YGR009C YMR111CQ04461 462 aaPredicted RBP5.36□□□□□ -1.55
SEC9YGR009C YLR271WQ06152 274 aa5.36□□□□□ -1.55
SEC9YGR009C STB3Q12427 513 aa5.36□□□□□ -1.55
SEC9YGR009C SEC2P17065 759 aa5.35□□□□□ -1.55
SEC9YGR009C SIS1P25294 352 aaKnown RBP5.35□□□□□ -1.55
SEC9YGR009C EUG1P32474 517 aa5.35□□□□□ -1.55
SEC9YGR009C YEL1P34225 687 aa5.35□□□□□ -1.55
SEC9YGR009C PXA2P34230 853 aa5.35□□□□□ -1.55
SEC9YGR009C TIF5P38431 405 aaKnown RBP5.35□□□□□ -1.55
SEC9YGR009C SSZ1P38788 538 aaKnown RBP5.35□□□□□ -1.55
SEC9YGR009C CTM1P38818 585 aa5.35□□□□□ -1.55
SEC9YGR009C SPC72P39723 622 aa5.35□□□□□ -1.55
SEC9YGR009C IAH1P41734 238 aa5.35□□□□□ -1.55
SEC9YGR009C SAP155P43612 1002 aa5.35□□□□□ -1.55
SEC9YGR009C RET2P43621 546 aa5.35□□□□□ -1.55
SEC9YGR009C SUM1P46676 1062 aa5.35□□□□□ -1.55
SEC9YGR009C COG6P53959 839 aa5.35□□□□□ -1.55
SEC9YGR009C TSR2Q06672 205 aaKnown RBP5.35□□□□□ -1.55
SEC9YGR009C RIO1Q12196 484 aaKnown RBP5.35□□□□□ -1.55
SEC9YGR009C SGS1P35187 1447 aa5.35□□□□□ -1.55
SEC9YGR009C SUI2P20459 304 aaKnown RBP5.35□□□□□ -1.55
SEC9YGR009C DIT2P21595 489 aa5.35□□□□□ -1.55
SEC9YGR009C SEC8P32855 1065 aa5.35□□□□□ -1.55
SEC9YGR009C SHC1P39000 512 aa5.35□□□□□ -1.55
SEC9YGR009C YJL070CP40361 888 aa5.35□□□□□ -1.55
SEC9YGR009C MAD1P40957 749 aa5.35□□□□□ -1.55
SEC9YGR009C SAE2P46946 345 aa5.35□□□□□ -1.55
SEC9YGR009C HST1P53685 503 aa5.35□□□□□ -1.55
SEC9YGR009C MET6P05694 767 aaKnown RBP5.34□□□□□ -1.55
SEC9YGR009C REC107P21651 314 aa5.34□□□□□ -1.55
SEC9YGR009C BUD2P33314 1104 aa5.34□□□□□ -1.55
SEC9YGR009C NUF2P33895 451 aa5.34□□□□□ -1.55
SEC9YGR009C YKL222CP35995 705 aa5.34□□□□□ -1.55
SEC9YGR009C MIA40P36046 403 aa5.34□□□□□ -1.55
SEC9YGR009C SIT1P39980 628 aa5.34□□□□□ -1.55
SEC9YGR009C TMN3P40071 706 aa5.34□□□□□ -1.55
SEC9YGR009C YIR042CP40586 236 aa5.34□□□□□ -1.55
SEC9YGR009C TEA1P47988 759 aa5.34□□□□□ -1.55
SEC9YGR009C ADE12P80210 433 aaKnown RBP5.34□□□□□ -1.55
SEC9YGR009C SAS4Q04003 481 aa5.34□□□□□ -1.55
SEC9YGR009C YMR018WQ04364 514 aa5.34□□□□□ -1.55
SEC9YGR009C YPL277CQ08989 487 aa5.34□□□□□ -1.55
SEC9YGR009C CFT1Q06632 1357 aaKnown RBP5.33□□□□□ -1.56
SEC9YGR009C AI2P03876 854 aa5.33□□□□□ -1.56
SEC9YGR009C SCP160P06105 1222 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56 RIP-Chip
SEC9YGR009C TIF1P10081 395 aaKnown RBP5.33□□□□□ -1.56
SEC9YGR009C ITR1P30605 584 aa5.33□□□□□ -1.56
SEC9YGR009C SSH4P32343 579 aa5.33□□□□□ -1.56
SEC9YGR009C ELM1P32801 640 aa5.33□□□□□ -1.56
SEC9YGR009C NUP120P35729 1037 aa5.33□□□□□ -1.56
SEC9YGR009C MIC60P36112 540 aa5.33□□□□□ -1.56
SEC9YGR009C MED8P38304 223 aa5.33□□□□□ -1.56
SEC9YGR009C TOM71P38825 639 aaKnown RBP5.33□□□□□ -1.56
SEC9YGR009C YHR219WP38900 624 aa5.33□□□□□ -1.56
SEC9YGR009C PTA1Q01329 785 aaPredicted RBP5.33□□□□□ -1.56
SEC9YGR009C SLP1Q12232 587 aa5.33□□□□□ -1.56
SEC9YGR009C ENT1Q12518 454 aa5.33□□□□□ -1.56
SEC9YGR009C IKI3Q06706 1349 aaKnown RBP5.33□□□□□ -1.56
SEC9YGR009C YMR084WA2P2R3 262 aa5.33□□□□□ -1.56
SEC9YGR009C VMA8P32610 256 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 11.2 ms