RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE10	YGL228W	PSK2	Q08217	1101 aa		6.3	□□□□□ -1.4
SHE10	YGL228W	MPH3	P0CE00	602 aa		6.29	□□□□□ -1.4
SHE10	YGL228W	SWI4	P25302	1093 aa	Known RBP	6.29	□□□□□ -1.4
SHE10	YGL228W	SPB4	P25808	606 aa	Predicted RBP	6.29	□□□□□ -1.4
SHE10	YGL228W	SPT21	P35209	758 aa		6.29	□□□□□ -1.4
SHE10	YGL228W	TTI1	P36097	1038 aa		6.29	□□□□□ -1.4
SHE10	YGL228W	RFC5	P38251	354 aa		6.29	□□□□□ -1.4
SHE10	YGL228W	NIT1	P40447	199 aa		6.29	□□□□□ -1.4
SHE10	YGL228W	UBP10	P53874	792 aa	Predicted RBP	6.29	□□□□□ -1.4
SHE10	YGL228W	RPT6	Q01939	405 aa	Known RBP	6.29	□□□□□ -1.4
SHE10	YGL228W	SRP54	P20424	541 aa	Known RBP	6.28	□□□□□ -1.4
SHE10	YGL228W	VPS1	P21576	704 aa	Known RBP	6.28	□□□□□ -1.4
SHE10	YGL228W	DIT2	P21595	489 aa		6.28	□□□□□ -1.4
SHE10	YGL228W	RNR3	P21672	869 aa	Known RBP	6.28	□□□□□ -1.4
SHE10	YGL228W	MRPL32	P25348	183 aa		6.28	□□□□□ -1.4
SHE10	YGL228W	CST26	P38226	397 aa		6.28	□□□□□ -1.4
SHE10	YGL228W	CIR1	P42940	261 aa		6.28	□□□□□ -1.4
SHE10	YGL228W	HST1	P53685	503 aa		6.28	□□□□□ -1.4
SHE10	YGL228W	LAP2	Q10740	671 aa		6.28	□□□□□ -1.4
SHE10	YGL228W	HSP82	P02829	709 aa	Known RBP	6.28	□□□□□ -1.4
SHE10	YGL228W	CDC6	P09119	513 aa		6.28	□□□□□ -1.4
SHE10	YGL228W	SAM2	P19358	384 aa	Known RBP	6.28	□□□□□ -1.4
SHE10	YGL228W	ROX1	P25042	368 aa		6.28	□□□□□ -1.4
SHE10	YGL228W	RDS1	P25611	832 aa		6.28	□□□□□ -1.4
SHE10	YGL228W	RPL8B	P29453	256 aa	Known RBP	6.28	□□□□□ -1.4
SHE10	YGL228W	BMH2	P34730	273 aa	Known RBP	6.28	□□□□□ -1.4
SHE10	YGL228W	MAL31	P38156	614 aa		6.28	□□□□□ -1.4
SHE10	YGL228W	MAL33	P38157	468 aa		6.28	□□□□□ -1.4
SHE10	YGL228W	SNF7	P39929	240 aa	Known RBP	6.28	□□□□□ -1.4
SHE10	YGL228W	PEX14	P53112	341 aa		6.28	□□□□□ -1.4
SHE10	YGL228W	HAP5	Q02516	242 aa		6.28	□□□□□ -1.4
SHE10	YGL228W	VPS30	Q02948	557 aa		6.28	□□□□□ -1.4
SHE10	YGL228W	PEX19	Q07418	342 aa		6.28	□□□□□ -1.4
SHE10	YGL228W	CSR2	Q12734	1121 aa		6.28	□□□□□ -1.4
SHE10	YGL228W	MET6	P05694	767 aa	Known RBP	6.27	□□□□□ -1.41
SHE10	YGL228W	RXT2	P38255	430 aa		6.27	□□□□□ -1.41
SHE10	YGL228W	VHR2	P40041	505 aa		6.27	□□□□□ -1.41
SHE10	YGL228W	PCI8	P40512	444 aa		6.27	□□□□□ -1.41
SHE10	YGL228W	FOL1	P53848	824 aa		6.27	□□□□□ -1.41
SHE10	YGL228W	SUE1	Q06524	206 aa		6.27	□□□□□ -1.41
SHE10	YGL228W	TUS1	Q06412	1307 aa		6.27	□□□□□ -1.41
SHE10	YGL228W	NUC1	P08466	329 aa		6.26	□□□□□ -1.41
SHE10	YGL228W	KRS1	P15180	591 aa	Known RBP	6.26	□□□□□ -1.41
SHE10	YGL228W	FRS2	P15625	503 aa	Known RBP	6.26	□□□□□ -1.41
SHE10	YGL228W	CBP3	P21560	335 aa		6.26	□□□□□ -1.41
SHE10	YGL228W	PNT1	P38969	423 aa		6.26	□□□□□ -1.41
SHE10	YGL228W	PEA2	P40091	420 aa		6.26	□□□□□ -1.41
SHE10	YGL228W	HYR1	P40581	163 aa	Known RBP	6.26	□□□□□ -1.41
SHE10	YGL228W	ALG2	P43636	503 aa		6.26	□□□□□ -1.41
SHE10	YGL228W	DCS2	Q12123	353 aa		6.26	□□□□□ -1.41
SHE10	YGL228W	STI1	P15705	589 aa	Known RBP RIP-Chip data	6.25	□□□□□ -1.41	not detected
SHE10	YGL228W	TIF4631	P39935	952 aa	Known RBP	6.25	□□□□□ -1.41
SHE10	YGL228W	ACA1	P39970	489 aa		6.25	□□□□□ -1.41
SHE10	YGL228W	SNU71	P53207	620 aa	Known RBP	6.25	□□□□□ -1.41
SHE10	YGL228W	YDR341C	Q05506	607 aa	Known RBP	6.25	□□□□□ -1.41
SHE10	YGL228W	DSE3	Q08729	430 aa		6.25	□□□□□ -1.41
SHE10	YGL228W	CIT1	P00890	479 aa		6.25	□□□□□ -1.41
SHE10	YGL228W	KEX1	P09620	729 aa		6.25	□□□□□ -1.41
SHE10	YGL228W	GAL2	P13181	574 aa		6.25	□□□□□ -1.41
SHE10	YGL228W	TPS3	P38426	1054 aa	Known RBP	6.25	□□□□□ -1.41
SHE10	YGL228W	UBP9	P39967	754 aa		6.25	□□□□□ -1.41
SHE10	YGL228W	PIL1	P53252	339 aa	Known RBP	6.25	□□□□□ -1.41
SHE10	YGL228W	MDM1	Q01846	1127 aa		6.25	□□□□□ -1.41
SHE10	YGL228W	PEX29	Q03370	554 aa		6.25	□□□□□ -1.41
SHE10	YGL228W	GIS4	Q04233	774 aa		6.25	□□□□□ -1.41
SHE10	YGL228W	SSA4	P22202	642 aa	Known RBP	6.24	□□□□□ -1.41
SHE10	YGL228W	DID4	P36108	232 aa		6.24	□□□□□ -1.41
SHE10	YGL228W	ARL1	P38116	183 aa	Known RBP	6.24	□□□□□ -1.41
SHE10	YGL228W	RVS167	P39743	482 aa	Known RBP	6.24	□□□□□ -1.41
SHE10	YGL228W	YGL138C	P53122	345 aa		6.24	□□□□□ -1.41
SHE10	YGL228W	GDE1	Q02979	1223 aa		6.24	□□□□□ -1.41
SHE10	YGL228W	CWC15	Q03772	175 aa	Known RBP	6.24	□□□□□ -1.41
SHE10	YGL228W	GET3	Q12154	354 aa	Known RBP	6.24	□□□□□ -1.41
SHE10	YGL228W	APC11	Q12157	165 aa		6.24	□□□□□ -1.41
SHE10	YGL228W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	6.24	□□□□□ -1.41	not detected
SHE10	YGL228W	NDT80	P38830	627 aa		6.23	□□□□□ -1.41
SHE10	YGL228W	VPS45	P38932	577 aa		6.23	□□□□□ -1.41
SHE10	YGL228W	ASE1	P50275	885 aa		6.23	□□□□□ -1.41
SHE10	YGL228W	CLF1	Q12309	687 aa	Predicted RBP	6.23	□□□□□ -1.41
SHE10	YGL228W	ECM29	P38737	1868 aa		6.23	□□□□□ -1.41
SHE10	YGL228W	PGI1	P12709	554 aa	Known RBP	6.22	□□□□□ -1.41
SHE10	YGL228W	RGP1	P16664	663 aa		6.22	□□□□□ -1.41
SHE10	YGL228W	URA1	P28272	314 aa	Predicted RBP	6.22	□□□□□ -1.41
SHE10	YGL228W	TOM71	P38825	639 aa	Known RBP	6.22	□□□□□ -1.41
SHE10	YGL228W	CCT5	P40413	562 aa	Known RBP	6.22	□□□□□ -1.41
SHE10	YGL228W	YIL089W	P40500	205 aa		6.22	□□□□□ -1.41
SHE10	YGL228W	KRE33	P53914	1056 aa	Known RBP	6.22	□□□□□ -1.41
SHE10	YGL228W	COG8	Q04632	607 aa		6.22	□□□□□ -1.41
SHE10	YGL228W	GIN4	Q12263	1142 aa		6.22	□□□□□ -1.41
SHE10	YGL228W	PTC5	Q12511	572 aa		6.22	□□□□□ -1.41
SHE10	YGL228W	FBP1	P09201	348 aa		6.22	□□□□□ -1.41
SHE10	YGL228W	MAK11	P20484	414 aa	Known RBP	6.22	□□□□□ -1.41
SHE10	YGL228W	KNS1	P32350	737 aa	Predicted RBP	6.22	□□□□□ -1.41
SHE10	YGL228W	ELM1	P32801	640 aa		6.22	□□□□□ -1.41
SHE10	YGL228W	PEX21	P50091	288 aa		6.22	□□□□□ -1.41
SHE10	YGL228W	NAF1	P53919	492 aa	Known RBP	6.22	□□□□□ -1.41
SHE10	YGL228W	SMD2	Q06217	110 aa	Known RBP	6.22	□□□□□ -1.41
SHE10	YGL228W	CSC1	Q06538	782 aa		6.22	□□□□□ -1.41
SHE10	YGL228W	UTP4	Q06679	776 aa	Known RBP	6.22	□□□□□ -1.41
SHE10	YGL228W	HXK1	P04806	485 aa	Known RBP	6.21	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 48.8 ms