RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeastyeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
XRN1YGL173C RDH54P38086 958 aa3.76□□□□□ -1.81
XRN1YGL173C MRPS18P42847 217 aa3.76□□□□□ -1.81
XRN1YGL173C YJR008WP47085 338 aa3.76□□□□□ -1.81
XRN1YGL173C VPS9P54787 451 aa3.76□□□□□ -1.81
XRN1YGL173C BSC2Q05611 235 aa3.76□□□□□ -1.81
XRN1YGL173C YLR001CQ07895 862 aa3.76□□□□□ -1.81
XRN1YGL173C PHO8P11491 566 aa3.75□□□□□ -1.81
XRN1YGL173C SLY41P22215 453 aa3.75□□□□□ -1.81
XRN1YGL173C RVS167P39743 482 aaKnown RBP3.75□□□□□ -1.81
XRN1YGL173C AIM9P40053 627 aaKnown RBP3.75□□□□□ -1.81
XRN1YGL173C RRD1P40454 393 aaKnown RBP3.75□□□□□ -1.81
XRN1YGL173C MTR4P47047 1073 aaKnown RBP3.75□□□□□ -1.81
XRN1YGL173C SPO20Q04359 397 aa3.75□□□□□ -1.81
XRN1YGL173C COG4Q06096 861 aa3.75□□□□□ -1.81
XRN1YGL173C OPI10Q08202 246 aa3.75□□□□□ -1.81
XRN1YGL173C ENV9Q08651 330 aa3.75□□□□□ -1.81
XRN1YGL173C SCM3Q12334 223 aa3.75□□□□□ -1.81
XRN1YGL173C MET6P05694 767 aaKnown RBP3.75□□□□□ -1.81
XRN1YGL173C STE6P12866 1290 aa3.75□□□□□ -1.81
XRN1YGL173C MRPL33P20084 86 aa3.75□□□□□ -1.81
XRN1YGL173C VTC4P47075 721 aa3.75□□□□□ -1.81
XRN1YGL173C TAF8Q03750 510 aa3.75□□□□□ -1.81
XRN1YGL173C SPO75Q07798 868 aa3.75□□□□□ -1.81
XRN1YGL173C NOP4P37838 685 aaKnown RBP3.75□□□□□ -1.81
XRN1YGL173C NUP82P40368 713 aa3.75□□□□□ -1.81
XRN1YGL173C PEX21P50091 288 aa3.75□□□□□ -1.81
XRN1YGL173C ERP6P53198 216 aa3.75□□□□□ -1.81
XRN1YGL173C CYT1P07143 309 aa3.75□□□□□ -1.81
XRN1YGL173C RPC31P17890 251 aa3.75□□□□□ -1.81
XRN1YGL173C YOL057WQ08225 711 aa3.75□□□□□ -1.81
XRN1YGL173C KAR1P11927 433 aa3.74□□□□□ -1.81
XRN1YGL173C PPG1P32838 368 aa3.74□□□□□ -1.81
XRN1YGL173C RIM11P38615 370 aa3.74□□□□□ -1.81
XRN1YGL173C HXT13P39924 564 aa3.74□□□□□ -1.81
XRN1YGL173C NNF2P53253 936 aa3.74□□□□□ -1.81
XRN1YGL173C HXT17P53631 564 aa3.74□□□□□ -1.81
XRN1YGL173C HXT15P54854 567 aa3.74□□□□□ -1.81
XRN1YGL173C YLL058WQ12198 575 aa3.74□□□□□ -1.81
XRN1YGL173C DYS1P38791 387 aa3.74□□□□□ -1.81
XRN1YGL173C VAC8P39968 578 aa3.74□□□□□ -1.81
XRN1YGL173C ALD6P54115 500 aaKnown RBP3.74□□□□□ -1.81
XRN1YGL173C YIL177CP40434 1758 aa3.74□□□□□ -1.81
XRN1YGL173C YJL225CP40889 1758 aa3.74□□□□□ -1.81
XRN1YGL173C ALA1P40825 983 aaKnown RBP3.74□□□□□ -1.81
XRN1YGL173C PRP9P19736 530 aaKnown RBP3.73□□□□□ -1.81
XRN1YGL173C PIN4P34217 668 aaKnown RBP RIP-Chip data3.73□□□□□ -1.81not detected
XRN1YGL173C EMP65P40085 556 aa3.73□□□□□ -1.81
XRN1YGL173C MAL11P53048 616 aa3.73□□□□□ -1.81
XRN1YGL173C IKI3Q06706 1349 aaKnown RBP3.73□□□□□ -1.81
XRN1YGL173C PDC1P06169 563 aaKnown RBP3.73□□□□□ -1.81
XRN1YGL173C HVG1P0CE11 249 aa3.73□□□□□ -1.81
XRN1YGL173C RPL8AP17076 256 aaKnown RBP3.73□□□□□ -1.81
XRN1YGL173C PFD1P46988 109 aa3.73□□□□□ -1.81
XRN1YGL173C TIM54P47045 478 aa3.73□□□□□ -1.81
XRN1YGL173C TGL2P54857 326 aa3.73□□□□□ -1.81
XRN1YGL173C NOC3Q07896 663 aaPredicted RBP3.73□□□□□ -1.81
XRN1YGL173C FMP25Q08023 583 aa3.73□□□□□ -1.81
XRN1YGL173C CDC31P06704 161 aaKnown RBP3.73□□□□□ -1.81
XRN1YGL173C GRX1P25373 110 aaKnown RBP3.73□□□□□ -1.81
XRN1YGL173C RPL8BP29453 256 aaKnown RBP3.73□□□□□ -1.81
XRN1YGL173C MTC2P34246 357 aa3.73□□□□□ -1.81
XRN1YGL173C YBR071WP38243 211 aa3.73□□□□□ -1.81
XRN1YGL173C YER156CP40093 338 aaKnown RBP3.73□□□□□ -1.81
XRN1YGL173C HXT8P40886 569 aa3.73□□□□□ -1.81
XRN1YGL173C HXT10P43581 546 aa3.73□□□□□ -1.81
XRN1YGL173C ATG16Q03818 150 aa3.73□□□□□ -1.81
XRN1YGL173C PSH1Q12161 406 aa3.73□□□□□ -1.81
XRN1YGL173C RKM4Q12504 494 aa3.73□□□□□ -1.81
XRN1YGL173C PIF1P07271 859 aa3.73□□□□□ -1.81
XRN1YGL173C RAD4P14736 754 aa3.73□□□□□ -1.81
XRN1YGL173C TSR4P25040 408 aa3.73□□□□□ -1.81
XRN1YGL173C SEC61P32915 480 aa3.73□□□□□ -1.81
XRN1YGL173C RPT1P33299 467 aaKnown RBP3.73□□□□□ -1.81
XRN1YGL173C RSP5P39940 809 aaKnown RBP3.73□□□□□ -1.81
XRN1YGL173C PEA2P40091 420 aa3.73□□□□□ -1.81
XRN1YGL173C DNM1P54861 757 aa3.73□□□□□ -1.81
XRN1YGL173C PMT7Q06644 662 aa3.73□□□□□ -1.81
XRN1YGL173C SLX4Q12098 748 aa3.73□□□□□ -1.81
XRN1YGL173C IRE1P32361 1115 aa3.72□□□□□ -1.81
XRN1YGL173C YKR078WP36158 585 aaKnown RBP3.72□□□□□ -1.81
XRN1YGL173C ISW1P38144 1129 aa3.72□□□□□ -1.81
XRN1YGL173C SAS4Q04003 481 aa3.72□□□□□ -1.81
XRN1YGL173C YML082WQ04533 649 aaKnown RBP3.72□□□□□ -1.81
XRN1YGL173C RAM1P22007 431 aa3.72□□□□□ -1.81
XRN1YGL173C IXR1P33417 597 aa3.72□□□□□ -1.81
XRN1YGL173C SOH1P38633 127 aa3.72□□□□□ -1.81
XRN1YGL173C YEL023CP39992 682 aa3.72□□□□□ -1.81
XRN1YGL173C FLC1Q08967 793 aa3.72□□□□□ -1.81
XRN1YGL173C RRP5Q05022 1729 aaKnown RBP3.72□□□□□ -1.81
XRN1YGL173C UTP9P38882 575 aaKnown RBP3.72□□□□□ -1.81
XRN1YGL173C EEB1Q02891 456 aa3.72□□□□□ -1.81
XRN1YGL173C YKL100CP34248 587 aa3.71□□□□□ -1.81
XRN1YGL173C DEF1P35732 738 aaKnown RBP3.71□□□□□ -1.81
XRN1YGL173C YKL050CP35736 922 aa3.71□□□□□ -1.81
XRN1YGL173C SHU2P38957 223 aa3.71□□□□□ -1.81
XRN1YGL173C ISU1Q03020 165 aa3.71□□□□□ -1.81
XRN1YGL173C CIT1P00890 479 aa3.71□□□□□ -1.82
XRN1YGL173C RPS6AP0CX37 236 aaKnown RBP3.71□□□□□ -1.82
XRN1YGL173C RPS6BP0CX38 236 aaPredicted RBP3.71□□□□□ -1.82
XRN1YGL173C HSP60P19882 572 aaKnown RBP3.71□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 47.8 ms