RNA–Protein interactions for RNA: YGL155W

CDC43, Transcript of Beta subunit of geranylgeranyltransferase type I, yeastyeast

Gene CDC43, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC43YGL155W YEL077CQ3E7X8 1277 aa6.18□□□□□ -1.42
CDC43YGL155W RIM15P43565 1770 aa6.18□□□□□ -1.42
CDC43YGL155W CPA2P03965 1118 aaKnown RBP6.17□□□□□ -1.42
CDC43YGL155W LEO1P38439 464 aa6.17□□□□□ -1.42
CDC43YGL155W STU2P46675 888 aa6.17□□□□□ -1.42
CDC43YGL155W ENP2P48234 707 aaKnown RBP6.17□□□□□ -1.42
CDC43YGL155W ESF1Q06344 628 aaKnown RBP6.17□□□□□ -1.42
CDC43YGL155W DDP1Q99321 188 aaKnown RBP6.17□□□□□ -1.42
CDC43YGL155W MOD5P07884 428 aa6.16□□□□□ -1.42
CDC43YGL155W ARG8P18544 423 aa6.16□□□□□ -1.42
CDC43YGL155W PEP3P27801 918 aa6.16□□□□□ -1.42
CDC43YGL155W YJU3P28321 313 aa6.16□□□□□ -1.42
CDC43YGL155W GLN1P32288 370 aaKnown RBP6.16□□□□□ -1.42
CDC43YGL155W NPR3P38742 1146 aa6.16□□□□□ -1.42
CDC43YGL155W CIC1P38779 376 aaKnown RBP6.16□□□□□ -1.42
CDC43YGL155W BUD6P41697 788 aa6.16□□□□□ -1.42
CDC43YGL155W TFG2P41896 400 aaPredicted RBP6.16□□□□□ -1.42
CDC43YGL155W SGD1Q06132 899 aa6.16□□□□□ -1.42
CDC43YGL155W LAM6Q08001 693 aa6.16□□□□□ -1.42
CDC43YGL155W SSF2Q12153 453 aaPredicted RBP6.16□□□□□ -1.42
CDC43YGL155W SSK22P25390 1331 aaPredicted RBP6.16□□□□□ -1.42
CDC43YGL155W SAC3P46674 1301 aa6.16□□□□□ -1.42
CDC43YGL155W PIF1P07271 859 aa6.15□□□□□ -1.42
CDC43YGL155W ERG12P07277 443 aa6.15□□□□□ -1.42
CDC43YGL155W MATALPHA2P0CY08 210 aa6.15□□□□□ -1.42
CDC43YGL155W HMLALPHA2P0CY09 210 aa6.15□□□□□ -1.42
CDC43YGL155W FRS2P15625 503 aaKnown RBP6.15□□□□□ -1.42
CDC43YGL155W SEC18P18759 758 aaKnown RBP6.15□□□□□ -1.42
CDC43YGL155W RDS1P25611 832 aa6.15□□□□□ -1.42
CDC43YGL155W MAL33P38157 468 aa6.15□□□□□ -1.42
CDC43YGL155W TCD1P38756 429 aa6.15□□□□□ -1.42
CDC43YGL155W RRM3P38766 723 aa6.15□□□□□ -1.42
CDC43YGL155W VID28P40547 921 aa6.15□□□□□ -1.42
CDC43YGL155W HXT10P43581 546 aa6.15□□□□□ -1.42
CDC43YGL155W CSN12P47130 423 aa6.15□□□□□ -1.42
CDC43YGL155W PIB2P53191 635 aa6.15□□□□□ -1.42
CDC43YGL155W HOS3Q02959 697 aaKnown RBP6.15□□□□□ -1.42
CDC43YGL155W IMH1Q06704 911 aaKnown RBP6.15□□□□□ -1.42
CDC43YGL155W RRI2Q12348 645 aa6.15□□□□□ -1.42
CDC43YGL155W SES1P07284 462 aaKnown RBP6.14□□□□□ -1.43
CDC43YGL155W PGI1P12709 554 aaKnown RBP6.14□□□□□ -1.43
CDC43YGL155W TRM1P15565 570 aaKnown RBP6.14□□□□□ -1.43
CDC43YGL155W FBP26P32604 452 aa6.14□□□□□ -1.43
CDC43YGL155W SLA1P32790 1244 aa6.14□□□□□ -1.43
CDC43YGL155W SER1P33330 395 aaKnown RBP6.14□□□□□ -1.43
CDC43YGL155W SKI2P35207 1287 aaKnown RBP RIP-Chip data6.14□□□□□ -1.43not detected
CDC43YGL155W RFC5P38251 354 aa6.14□□□□□ -1.43
CDC43YGL155W ENT3P47160 408 aa6.14□□□□□ -1.43
CDC43YGL155W YGL082WP53155 381 aa6.14□□□□□ -1.43
CDC43YGL155W TIM50Q02776 476 aa6.14□□□□□ -1.43
CDC43YGL155W FCP1Q03254 732 aa6.14□□□□□ -1.43
CDC43YGL155W TRS33Q99394 268 aa6.14□□□□□ -1.43
CDC43YGL155W UTP10P42945 1769 aaKnown RBP6.13□□□□□ -1.43
CDC43YGL155W ATE1P16639 503 aa6.13□□□□□ -1.43
CDC43YGL155W PAT1P25644 796 aaKnown RBP6.13□□□□□ -1.43
CDC43YGL155W IMP2'P32351 346 aa6.13□□□□□ -1.43
CDC43YGL155W YKT6P36015 200 aaKnown RBP6.13□□□□□ -1.43
CDC43YGL155W GUA1P38625 525 aaKnown RBP6.13□□□□□ -1.43
CDC43YGL155W COBP00163 385 aa6.12□□□□□ -1.43
CDC43YGL155W ADR1P07248 1323 aa6.12□□□□□ -1.43
CDC43YGL155W MBR1P23493 339 aa6.12□□□□□ -1.43
CDC43YGL155W SPC110P32380 944 aa6.12□□□□□ -1.43
CDC43YGL155W MET1P36150 593 aa6.12□□□□□ -1.43
CDC43YGL155W RFT1P38206 574 aaPredicted RBP6.12□□□□□ -1.43
CDC43YGL155W AIR1P40507 360 aaKnown RBP6.12□□□□□ -1.43
CDC43YGL155W YPT11P48559 417 aa6.12□□□□□ -1.43
CDC43YGL155W CLA4P48562 842 aa6.12□□□□□ -1.43
CDC43YGL155W YNL193WP53870 558 aa6.12□□□□□ -1.43
CDC43YGL155W FAR11P53917 953 aa6.12□□□□□ -1.43
CDC43YGL155W RPN7Q06103 429 aaKnown RBP6.12□□□□□ -1.43
CDC43YGL155W SPN1Q06505 410 aaPredicted RBP6.12□□□□□ -1.43
CDC43YGL155W TAH18Q12181 623 aa6.12□□□□□ -1.43
CDC43YGL155W HAT1Q12341 374 aa6.12□□□□□ -1.43
CDC43YGL155W PGA3Q12746 312 aaKnown RBP6.12□□□□□ -1.43
CDC43YGL155W PDC1P06169 563 aaKnown RBP6.11□□□□□ -1.43
CDC43YGL155W RSC30P38781 883 aa6.11□□□□□ -1.43
CDC43YGL155W CRG1P38892 291 aaRIP-Chip data6.11□□□□□ -1.43not detected
CDC43YGL155W YER130CP39959 443 aa6.11□□□□□ -1.43
CDC43YGL155W PUS6P53294 404 aa6.11□□□□□ -1.43
CDC43YGL155W UBP16Q02863 499 aa6.11□□□□□ -1.43
CDC43YGL155W PKH3Q03306 898 aaPredicted RBP6.11□□□□□ -1.43
CDC43YGL155W YLR407WQ06070 228 aa6.11□□□□□ -1.43
CDC43YGL155W YDL206WQ12424 762 aa6.11□□□□□ -1.43
CDC43YGL155W RPL22AP05749 121 aaKnown RBP6.1□□□□□ -1.43
CDC43YGL155W GPA1P08539 472 aa6.1□□□□□ -1.43
CDC43YGL155W CBP3P21560 335 aa6.1□□□□□ -1.43
CDC43YGL155W PRP40P33203 583 aaKnown RBP6.1□□□□□ -1.43
CDC43YGL155W MFT1P33441 392 aaKnown RBP6.1□□□□□ -1.43
CDC43YGL155W GEF1P37020 779 aa6.1□□□□□ -1.43
CDC43YGL155W RRP8P38961 392 aaKnown RBP6.1□□□□□ -1.43
CDC43YGL155W NUG1P40010 520 aaKnown RBP6.1□□□□□ -1.43
CDC43YGL155W CEP3P40969 608 aa6.1□□□□□ -1.43
CDC43YGL155W SFI1Q12369 946 aa6.1□□□□□ -1.43
CDC43YGL155W LAM4P38800 1345 aa6.09□□□□□ -1.43
CDC43YGL155W POM152P39685 1337 aa6.09□□□□□ -1.43
CDC43YGL155W HSP82P02829 709 aaKnown RBP6.09□□□□□ -1.43
CDC43YGL155W PFK2P16862 959 aaKnown RBP RIP-Chip data6.09□□□□□ -1.43not detected
CDC43YGL155W GSY2P27472 705 aa6.09□□□□□ -1.43
CDC43YGL155W DOT5P40553 215 aa6.09□□□□□ -1.43
CDC43YGL155W YJL181WP46987 611 aa6.09□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms