RNA–Protein interactions for RNA: YGL056C

SDS23, Transcript of Protein involved in cell separation during budding, yeast

Gene SDS23, Length 1,584 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDS23	YGL056C	ULP1	Q02724	621 aa		5.01	□□□□□ -1.61
SDS23	YGL056C	TDA5	Q06417	326 aa	Known RBP	5.01	□□□□□ -1.61
SDS23	YGL056C	OPI10	Q08202	246 aa		5.01	□□□□□ -1.61
SDS23	YGL056C	KAR2	P16474	682 aa	Known RBP	5	□□□□□ -1.61
SDS23	YGL056C	TSR4	P25040	408 aa		5	□□□□□ -1.61
SDS23	YGL056C	DUR3	P33413	735 aa		5	□□□□□ -1.61
SDS23	YGL056C	ISW1	P38144	1129 aa		5	□□□□□ -1.61
SDS23	YGL056C	GIP1	P38229	639 aa		5	□□□□□ -1.61
SDS23	YGL056C	NUP82	P40368	713 aa		5	□□□□□ -1.61
SDS23	YGL056C	MON1	P53129	644 aa		5	□□□□□ -1.61
SDS23	YGL056C	NAN1	Q02931	896 aa	Known RBP	5	□□□□□ -1.61
SDS23	YGL056C	ADI1	Q03677	179 aa		5	□□□□□ -1.61
SDS23	YGL056C	POB3	Q04636	552 aa	Known RBP	5	□□□□□ -1.61
SDS23	YGL056C	YOR296W	Q08748	1289 aa		5	□□□□□ -1.61
SDS23	YGL056C	INO80	P53115	1489 aa		5	□□□□□ -1.61
SDS23	YGL056C	GCR1	P07261	785 aa		4.99	□□□□□ -1.61
SDS23	YGL056C	TIM54	P47045	478 aa		4.99	□□□□□ -1.61
SDS23	YGL056C	YJR008W	P47085	338 aa		4.99	□□□□□ -1.61
SDS23	YGL056C	TIM23	P32897	222 aa		4.99	□□□□□ -1.61
SDS23	YGL056C	YHR020W	P38708	688 aa	Known RBP	4.99	□□□□□ -1.61
SDS23	YGL056C	MNN1	P39106	762 aa		4.99	□□□□□ -1.61
SDS23	YGL056C	ALO1	P54783	526 aa	Known RBP	4.99	□□□□□ -1.61
SDS23	YGL056C	YPL034W	Q03083	165 aa		4.99	□□□□□ -1.61
SDS23	YGL056C	EMG1	Q06287	252 aa	Known RBP	4.99	□□□□□ -1.61
SDS23	YGL056C	UBX5	Q06682	500 aa		4.99	□□□□□ -1.61
SDS23	YGL056C	TOP1	P04786	769 aa		4.98	□□□□□ -1.61
SDS23	YGL056C	MET6	P05694	767 aa	Known RBP	4.98	□□□□□ -1.61
SDS23	YGL056C	FPS1	P23900	669 aa		4.98	□□□□□ -1.61
SDS23	YGL056C	AIM46	P38885	310 aa		4.98	□□□□□ -1.61
SDS23	YGL056C	YTA6	P40328	754 aa		4.98	□□□□□ -1.61
SDS23	YGL056C	INP52	P50942	1183 aa		4.98	□□□□□ -1.61
SDS23	YGL056C	NUT1	P53114	1132 aa		4.98	□□□□□ -1.61
SDS23	YGL056C	TYW3	P53177	273 aa		4.98	□□□□□ -1.61
SDS23	YGL056C	EEB1	Q02891	456 aa		4.98	□□□□□ -1.61
SDS23	YGL056C	MSH6	Q03834	1242 aa		4.98	□□□□□ -1.61
SDS23	YGL056C	RTT10	Q08924	1013 aa		4.98	□□□□□ -1.61
SDS23	YGL056C	FAL1	Q12099	399 aa	Known RBP	4.98	□□□□□ -1.61
SDS23	YGL056C	YJR142W	P47173	342 aa		4.97	□□□□□ -1.61
SDS23	YGL056C	GNP1	P48813	663 aa		4.97	□□□□□ -1.61
SDS23	YGL056C	SGS1	P35187	1447 aa		4.97	□□□□□ -1.61
SDS23	YGL056C	PYC2	P32327	1180 aa	Known RBP	4.96	□□□□□ -1.62
SDS23	YGL056C	KNS1	P32350	737 aa	Predicted RBP	4.96	□□□□□ -1.62
SDS23	YGL056C	IRE1	P32361	1115 aa		4.96	□□□□□ -1.62
SDS23	YGL056C	TOM20	P35180	183 aa		4.96	□□□□□ -1.62
SDS23	YGL056C	YBR287W	P38355	427 aa		4.96	□□□□□ -1.62
SDS23	YGL056C	PRY1	P47032	299 aa		4.96	□□□□□ -1.62
SDS23	YGL056C	PSH1	Q12161	406 aa		4.96	□□□□□ -1.62
SDS23	YGL056C	PHO8	P11491	566 aa		4.95	□□□□□ -1.62
SDS23	YGL056C	BAS1	P22035	811 aa		4.95	□□□□□ -1.62
SDS23	YGL056C	PDC6	P26263	563 aa	Known RBP	4.95	□□□□□ -1.62
SDS23	YGL056C	GRX4	P32642	244 aa		4.95	□□□□□ -1.62
SDS23	YGL056C	XKS1	P42826	600 aa		4.95	□□□□□ -1.62
SDS23	YGL056C	MRL1	Q06815	381 aa		4.95	□□□□□ -1.62
SDS23	YGL056C	LEU1	P07264	779 aa	Known RBP	4.95	□□□□□ -1.62
SDS23	YGL056C	PDC5	P16467	563 aa	Known RBP	4.95	□□□□□ -1.62
SDS23	YGL056C	STE5	P32917	917 aa		4.95	□□□□□ -1.62
SDS23	YGL056C	OMA1	P36163	345 aa		4.95	□□□□□ -1.62
SDS23	YGL056C	AHP1	P38013	176 aa	Known RBP	4.95	□□□□□ -1.62
SDS23	YGL056C	ECM2	P38241	364 aa	Known RBP	4.95	□□□□□ -1.62
SDS23	YGL056C	RVS167	P39743	482 aa	Known RBP	4.95	□□□□□ -1.62
SDS23	YGL056C	YIL165C	P40446	119 aa		4.95	□□□□□ -1.62
SDS23	YGL056C	SAP155	P43612	1002 aa		4.95	□□□□□ -1.62
SDS23	YGL056C	RTS3	P53289	263 aa		4.95	□□□□□ -1.62
SDS23	YGL056C	CUS1	Q02554	436 aa	Predicted RBP	4.95	□□□□□ -1.62
SDS23	YGL056C	FLC1	Q08967	793 aa		4.95	□□□□□ -1.62
SDS23	YGL056C	YGR161W-C	Q3E744	92 aa		4.95	□□□□□ -1.62
SDS23	YGL056C	SSB1	P11484	613 aa	Known RBP	4.94	□□□□□ -1.62
SDS23	YGL056C	RSP5	P39940	809 aa	Known RBP	4.94	□□□□□ -1.62
SDS23	YGL056C	CHZ1	P40019	153 aa	Predicted RBP	4.94	□□□□□ -1.62
SDS23	YGL056C	SSB2	P40150	613 aa	Known RBP	4.94	□□□□□ -1.62
SDS23	YGL056C	ITC1	P53125	1264 aa		4.94	□□□□□ -1.62
SDS23	YGL056C	ERR1	P0CX10	437 aa		4.93	□□□□□ -1.62
SDS23	YGL056C	ERR2	P0CX11	437 aa		4.93	□□□□□ -1.62
SDS23	YGL056C	YBR184W	P38299	523 aa		4.93	□□□□□ -1.62
SDS23	YGL056C	RSM26	P47141	266 aa		4.93	□□□□□ -1.62
SDS23	YGL056C	SKP1	P52286	194 aa		4.93	□□□□□ -1.62
SDS23	YGL056C	TMA46	Q12000	345 aa	Known RBP	4.93	□□□□□ -1.62
SDS23	YGL056C	YLR125W	Q12138	136 aa		4.93	□□□□□ -1.62
SDS23	YGL056C	SEC23	P15303	768 aa	Known RBP	4.92	□□□□□ -1.62
SDS23	YGL056C	SQT1	P35184	431 aa		4.92	□□□□□ -1.62
SDS23	YGL056C	RIM11	P38615	370 aa		4.92	□□□□□ -1.62
SDS23	YGL056C	PEX28	P38848	579 aa		4.92	□□□□□ -1.62
SDS23	YGL056C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
SDS23	YGL056C	ESC2	Q06340	456 aa		4.92	□□□□□ -1.62
SDS23	YGL056C	PMT7	Q06644	662 aa		4.92	□□□□□ -1.62
SDS23	YGL056C	SPA2	P23201	1466 aa	Known RBP	4.92	□□□□□ -1.62
SDS23	YGL056C	HEM13	P11353	328 aa	Known RBP	4.91	□□□□□ -1.62
SDS23	YGL056C	HXT13	P39924	564 aa		4.91	□□□□□ -1.62
SDS23	YGL056C	YGL140C	P53120	1219 aa		4.91	□□□□□ -1.62
SDS23	YGL056C	YGR125W	P53273	1036 aa		4.91	□□□□□ -1.62
SDS23	YGL056C	HXT17	P53631	564 aa		4.91	□□□□□ -1.62
SDS23	YGL056C	YNR040W	P53736	256 aa		4.91	□□□□□ -1.62
SDS23	YGL056C	HXT15	P54854	567 aa		4.91	□□□□□ -1.62
SDS23	YGL056C	UTP14	Q04500	899 aa	Known RBP	4.91	□□□□□ -1.62
SDS23	YGL056C	HDA2	Q06629	674 aa		4.91	□□□□□ -1.62
SDS23	YGL056C	CMR1	Q12510	522 aa	Known RBP	4.91	□□□□□ -1.62
SDS23	YGL056C	TRP2	P00899	507 aa	Known RBP	4.91	□□□□□ -1.62
SDS23	YGL056C	RGP1	P16664	663 aa		4.91	□□□□□ -1.62
SDS23	YGL056C	RPL8B	P29453	256 aa	Known RBP	4.91	□□□□□ -1.62
SDS23	YGL056C	THI4	P32318	326 aa		4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms