RNA–Protein interactions for RNA: YDR499W

LCD1, Transcript of Essential protein required for the DNA integrity checkpoint pathways, yeastyeast

Gene LCD1, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCD1YDR499W REI1P38344 393 aaPredicted RBP3.2□□□□□ -1.9
LCD1YDR499W MON1P53129 644 aa3.2□□□□□ -1.9
LCD1YDR499W CDC55Q00362 526 aa3.2□□□□□ -1.9
LCD1YDR499W INP54Q08227 384 aaKnown RBP3.2□□□□□ -1.9
LCD1YDR499W RPS4AP0CX35 261 aaKnown RBP3.2□□□□□ -1.9
LCD1YDR499W RPS4BP0CX36 261 aaKnown RBP3.2□□□□□ -1.9
LCD1YDR499W PRP5P21372 849 aaPredicted RBP3.2□□□□□ -1.9
LCD1YDR499W ERP5P38819 212 aa3.2□□□□□ -1.9
LCD1YDR499W MEC3Q02574 474 aa3.2□□□□□ -1.9
LCD1YDR499W MSH6Q03834 1242 aa3.2□□□□□ -1.9
LCD1YDR499W CDC3P32457 520 aaKnown RBP3.19□□□□□ -1.9
LCD1YDR499W MSH4P40965 878 aaPredicted RBP3.19□□□□□ -1.9
LCD1YDR499W ELA1P53861 379 aaPredicted RBP3.19□□□□□ -1.9
LCD1YDR499W EAR1Q03212 550 aa3.19□□□□□ -1.9
LCD1YDR499W YBL113CQ7M4S9 792 aa3.19□□□□□ -1.9
LCD1YDR499W DFG16Q99234 619 aa3.19□□□□□ -1.9
LCD1YDR499W MCM5P29496 775 aaKnown RBP3.19□□□□□ -1.9
LCD1YDR499W MDJ2P42834 146 aa3.19□□□□□ -1.9
LCD1YDR499W NUT1P53114 1132 aa3.19□□□□□ -1.9
LCD1YDR499W YAF9P53930 226 aa3.19□□□□□ -1.9
LCD1YDR499W FRT1Q99332 602 aa3.19□□□□□ -1.9
LCD1YDR499W TY1A-LR4P0C2I8 440 aaKnown RBP3.18□□□□□ -1.9
LCD1YDR499W TY1A-DR6P0CX70 440 aa3.18□□□□□ -1.9
LCD1YDR499W TY1A-ER1P0CX71 440 aa3.18□□□□□ -1.9
LCD1YDR499W TY1A-LR2P0CX72 440 aa3.18□□□□□ -1.9
LCD1YDR499W TY1A-PLP0CX73 440 aa3.18□□□□□ -1.9
LCD1YDR499W TY1A-JR1P0CX74 440 aa3.18□□□□□ -1.9
LCD1YDR499W TY1A-LR3P0CX75 440 aa3.18□□□□□ -1.9
LCD1YDR499W TY1A-ML2P0CX76 440 aa3.18□□□□□ -1.9
LCD1YDR499W OYE3P41816 400 aaPredicted RBP3.18□□□□□ -1.9
LCD1YDR499W PMT7Q06644 662 aa3.18□□□□□ -1.9
LCD1YDR499W GPI13Q07830 1017 aa3.18□□□□□ -1.9
LCD1YDR499W YOR059CQ08448 450 aaKnown RBP3.18□□□□□ -1.9
LCD1YDR499W TY1A-GR1Q12085 440 aa3.18□□□□□ -1.9
LCD1YDR499W HAT1Q12341 374 aa3.18□□□□□ -1.9
LCD1YDR499W TY1A-PR3Q6Q5H1 440 aaKnown RBP3.18□□□□□ -1.9
LCD1YDR499W TY1A-OLQ92392 440 aaKnown RBP3.18□□□□□ -1.9
LCD1YDR499W HSP78P33416 811 aa3.17□□□□□ -1.9
LCD1YDR499W YGR045CP53229 120 aa3.17□□□□□ -1.9
LCD1YDR499W NUT2Q06213 157 aa3.17□□□□□ -1.9
LCD1YDR499W NFS1P25374 497 aa3.17□□□□□ -1.9
LCD1YDR499W SAP155P43612 1002 aa3.17□□□□□ -1.9
LCD1YDR499W AVO1Q08236 1176 aa3.17□□□□□ -1.9
LCD1YDR499W GAS1P22146 559 aaKnown RBP3.16□□□□□ -1.9
LCD1YDR499W UBP5P39944 805 aa3.16□□□□□ -1.9
LCD1YDR499W ECL1P48235 211 aa3.16□□□□□ -1.9
LCD1YDR499W ALT1P52893 592 aa3.16□□□□□ -1.9
LCD1YDR499W NOC3Q07896 663 aaPredicted RBP3.16□□□□□ -1.9
LCD1YDR499W GEF1P37020 779 aa3.16□□□□□ -1.9
LCD1YDR499W SLS1P42900 643 aa3.16□□□□□ -1.9
LCD1YDR499W SSY1Q03770 852 aa3.16□□□□□ -1.9
LCD1YDR499W ADP1P25371 1049 aa3.15□□□□□ -1.9
LCD1YDR499W PRO1P32264 428 aa3.15□□□□□ -1.9
LCD1YDR499W YKL077WP36081 392 aa3.15□□□□□ -1.9
LCD1YDR499W RVS167P39743 482 aaKnown RBP3.15□□□□□ -1.9
LCD1YDR499W TRE1Q08919 783 aa3.15□□□□□ -1.9
LCD1YDR499W YVC1Q12324 675 aa3.15□□□□□ -1.9
LCD1YDR499W SMY2P32909 740 aaKnown RBP3.15□□□□□ -1.91
LCD1YDR499W NMD3P38861 518 aaKnown RBP3.15□□□□□ -1.91
LCD1YDR499W EXO5P38289 585 aa3.14□□□□□ -1.91
LCD1YDR499W SAM37P50110 327 aa3.14□□□□□ -1.91
LCD1YDR499W PRP43P53131 767 aaKnown RBP3.14□□□□□ -1.91
LCD1YDR499W NEM1P38757 446 aa3.13□□□□□ -1.91
LCD1YDR499W PTC7P38797 343 aa3.13□□□□□ -1.91
LCD1YDR499W NIT1P40447 199 aa3.13□□□□□ -1.91
LCD1YDR499W TPP1Q03796 238 aa3.13□□□□□ -1.91
LCD1YDR499W NNK1P36003 928 aa3.13□□□□□ -1.91
LCD1YDR499W PEX7P39108 375 aa3.13□□□□□ -1.91
LCD1YDR499W GTS1P40956 396 aa3.13□□□□□ -1.91
LCD1YDR499W YCS4Q06156 1176 aa3.13□□□□□ -1.91
LCD1YDR499W UGA4P32837 571 aa3.12□□□□□ -1.91
LCD1YDR499W ARL1P38116 183 aaKnown RBP3.12□□□□□ -1.91
LCD1YDR499W YHL050CP38721 697 aa3.12□□□□□ -1.91
LCD1YDR499W CIC1P38779 376 aaKnown RBP3.12□□□□□ -1.91
LCD1YDR499W YHR219WP38900 624 aa3.12□□□□□ -1.91
LCD1YDR499W SHU2P38957 223 aa3.12□□□□□ -1.91
LCD1YDR499W PEX13P80667 386 aa3.12□□□□□ -1.91
LCD1YDR499W PUS7Q08647 676 aaKnown RBP3.12□□□□□ -1.91
LCD1YDR499W YAR028WP39548 234 aa3.12□□□□□ -1.91
LCD1YDR499W YNR063WP53749 607 aa3.12□□□□□ -1.91
LCD1YDR499W CDA2Q06703 312 aa3.12□□□□□ -1.91
LCD1YDR499W LPX1Q12405 387 aaKnown RBP3.12□□□□□ -1.91
LCD1YDR499W MTR4P47047 1073 aaKnown RBP3.11□□□□□ -1.91
LCD1YDR499W MSH3P25336 1018 aa3.11□□□□□ -1.91
LCD1YDR499W RSM26P47141 266 aa3.11□□□□□ -1.91
LCD1YDR499W YLR257WQ06146 321 aaKnown RBP3.11□□□□□ -1.91
LCD1YDR499W RET1P22276 1149 aaKnown RBP3.1□□□□□ -1.91
LCD1YDR499W PRP40P33203 583 aaKnown RBP3.1□□□□□ -1.91
LCD1YDR499W TSA1P34760 196 aaKnown RBP3.1□□□□□ -1.91
LCD1YDR499W YKL222CP35995 705 aa3.1□□□□□ -1.91
LCD1YDR499W XKS1P42826 600 aa3.1□□□□□ -1.91
LCD1YDR499W UTP5Q04177 643 aaKnown RBP3.1□□□□□ -1.91
LCD1YDR499W DAL4Q04895 635 aa3.1□□□□□ -1.91
LCD1YDR499W ATG14P38270 344 aa3.09□□□□□ -1.91
LCD1YDR499W NOG1Q02892 647 aaKnown RBP3.09□□□□□ -1.91
LCD1YDR499W SQT1P35184 431 aa3.09□□□□□ -1.91
LCD1YDR499W ETP1P38748 585 aaKnown RBP3.09□□□□□ -1.91
LCD1YDR499W ORC3P54790 616 aa3.09□□□□□ -1.91
LCD1YDR499W YHL012WP38709 493 aa3.08□□□□□ -1.92
LCD1YDR499W ULP1Q02724 621 aa3.08□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 62.2 ms