RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W STI1P15705 589 aaKnown RBP RIP-Chip data1.75□□□□□ -2.13not detected
MSN5YDR335W BAS1P22035 811 aa1.75□□□□□ -2.13
MSN5YDR335W NIT1P40447 199 aa1.75□□□□□ -2.13
MSN5YDR335W YFL034WP43564 1073 aa1.75□□□□□ -2.13
MSN5YDR335W HLJ1P48353 224 aa1.75□□□□□ -2.13
MSN5YDR335W SUT1P53032 299 aaKnown RBP1.75□□□□□ -2.13
MSN5YDR335W CCP1P00431 361 aa1.75□□□□□ -2.13
MSN5YDR335W STE6P12866 1290 aa1.75□□□□□ -2.13
MSN5YDR335W SSD1P24276 1250 aaKnown RBP RIP-Chip data1.75□□□□□ -2.13not detected
MSN5YDR335W RAD27P26793 382 aa1.75□□□□□ -2.13
MSN5YDR335W PET112P33893 541 aa1.75□□□□□ -2.13
MSN5YDR335W BSD2P38356 321 aa1.75□□□□□ -2.13
MSN5YDR335W NOC2P39744 710 aaKnown RBP1.75□□□□□ -2.13
MSN5YDR335W ALO1P54783 526 aaKnown RBP1.75□□□□□ -2.13
MSN5YDR335W DOS2P54858 310 aa1.75□□□□□ -2.13
MSN5YDR335W DNM1P54861 757 aa1.75□□□□□ -2.13
MSN5YDR335W NSE3Q05541 303 aa1.75□□□□□ -2.13
MSN5YDR335W SGS1P35187 1447 aa1.75□□□□□ -2.13
MSN5YDR335W TY3B-GQ99315 1547 aa1.75□□□□□ -2.13
MSN5YDR335W PRE9P23638 258 aaKnown RBP1.75□□□□□ -2.13
MSN5YDR335W MRPL16P38064 232 aa1.75□□□□□ -2.13
MSN5YDR335W NSG2P53898 299 aa1.75□□□□□ -2.13
MSN5YDR335W CWC15Q03772 175 aaKnown RBP1.75□□□□□ -2.13
MSN5YDR335W PUF6Q04373 656 aaKnown RBP1.75□□□□□ -2.13
MSN5YDR335W YPQ2Q06328 317 aa1.75□□□□□ -2.13
MSN5YDR335W GRX1P25373 110 aaKnown RBP1.74□□□□□ -2.13
MSN5YDR335W UGA4P32837 571 aa1.74□□□□□ -2.13
MSN5YDR335W DUR3P33413 735 aa1.74□□□□□ -2.13
MSN5YDR335W NAF1P53919 492 aaKnown RBP1.74□□□□□ -2.13
MSN5YDR335W PSH1Q12161 406 aa1.74□□□□□ -2.13
MSN5YDR335W ECM5Q03214 1411 aa1.74□□□□□ -2.13
MSN5YDR335W PDR12Q02785 1511 aa1.74□□□□□ -2.13
MSN5YDR335W ULS1Q08562 1619 aa1.74□□□□□ -2.13
MSN5YDR335W IML1P47170 1584 aa1.74□□□□□ -2.13
MSN5YDR335W TRL1P09880 827 aaKnown RBP1.74□□□□□ -2.13
MSN5YDR335W FPS1P23900 669 aa1.74□□□□□ -2.13
MSN5YDR335W RPN12P32496 274 aa1.74□□□□□ -2.13
MSN5YDR335W ISC10P32645 267 aa1.74□□□□□ -2.13
MSN5YDR335W YBR197CP38306 217 aa1.74□□□□□ -2.13
MSN5YDR335W YNR040WP53736 256 aa1.74□□□□□ -2.13
MSN5YDR335W FAL1Q12099 399 aaKnown RBP1.74□□□□□ -2.13
MSN5YDR335W TSC13Q99190 310 aa1.74□□□□□ -2.13
MSN5YDR335W TAF2P23255 1407 aa1.74□□□□□ -2.13
MSN5YDR335W TFC3P34111 1160 aa1.73□□□□□ -2.13
MSN5YDR335W ECM2P38241 364 aaKnown RBP1.73□□□□□ -2.13
MSN5YDR335W HXT5P38695 592 aa1.73□□□□□ -2.13
MSN5YDR335W OSH7P38755 437 aa1.73□□□□□ -2.13
MSN5YDR335W YGR125WP53273 1036 aa1.73□□□□□ -2.13
MSN5YDR335W VMS1Q04311 632 aaKnown RBP1.73□□□□□ -2.13
MSN5YDR335W GDB1Q06625 1536 aa1.73□□□□□ -2.13
MSN5YDR335W GFD2P25370 566 aaKnown RBP1.73□□□□□ -2.13
MSN5YDR335W FUI1P38196 639 aa1.73□□□□□ -2.13
MSN5YDR335W ROG3P43602 733 aa1.73□□□□□ -2.13
MSN5YDR335W VPS16Q03308 798 aa1.73□□□□□ -2.13
MSN5YDR335W COG4Q06096 861 aa1.73□□□□□ -2.13
MSN5YDR335W OXR1Q08952 273 aa1.73□□□□□ -2.13
MSN5YDR335W OSH2Q12451 1283 aa1.73□□□□□ -2.13
MSN5YDR335W SNF2P22082 1703 aa1.73□□□□□ -2.13
MSN5YDR335W IES1P43579 692 aa1.73□□□□□ -2.13
MSN5YDR335W YPL062WQ02781 134 aa1.73□□□□□ -2.13
MSN5YDR335W TMA64Q04600 565 aaKnown RBP1.73□□□□□ -2.13
MSN5YDR335W HPF1Q05164 967 aa1.73□□□□□ -2.13
MSN5YDR335W RRP15Q06511 250 aaPredicted RBP1.73□□□□□ -2.13
MSN5YDR335W SNT2P53127 1403 aa1.73□□□□□ -2.13
MSN5YDR335W MDJ1P35191 511 aa1.72□□□□□ -2.13
MSN5YDR335W BLI1P35727 113 aa1.72□□□□□ -2.13
MSN5YDR335W GLY1P37303 387 aaKnown RBP1.72□□□□□ -2.13
MSN5YDR335W SND1Q04007 877 aa1.72□□□□□ -2.13
MSN5YDR335W SCC2Q04002 1493 aa1.72□□□□□ -2.13
MSN5YDR335W MMS22Q06164 1454 aa1.72□□□□□ -2.13
MSN5YDR335W COBP00163 385 aa1.72□□□□□ -2.13
MSN5YDR335W ARE1P25628 610 aa1.72□□□□□ -2.13
MSN5YDR335W MET4P32389 672 aa1.72□□□□□ -2.13
MSN5YDR335W GRX4P32642 244 aa1.72□□□□□ -2.13
MSN5YDR335W PPX1P38698 397 aa1.72□□□□□ -2.13
MSN5YDR335W FAA4P47912 694 aaKnown RBP1.72□□□□□ -2.13
MSN5YDR335W TYW3P53177 273 aa1.72□□□□□ -2.13
MSN5YDR335W SSF2Q12153 453 aaPredicted RBP1.72□□□□□ -2.13
MSN5YDR335W MPD2Q99316 277 aa1.72□□□□□ -2.13
MSN5YDR335W ERR1P0CX10 437 aa1.72□□□□□ -2.13
MSN5YDR335W ERR2P0CX11 437 aa1.72□□□□□ -2.13
MSN5YDR335W IRE1P32361 1115 aa1.72□□□□□ -2.13
MSN5YDR335W YJR120WP47157 116 aa1.72□□□□□ -2.13
MSN5YDR335W ATG1P53104 897 aa1.72□□□□□ -2.13
MSN5YDR335W TY1A-BLQ12266 440 aa1.72□□□□□ -2.13
MSN5YDR335W HIF1Q12373 385 aa1.72□□□□□ -2.13
MSN5YDR335W TRS33Q99394 268 aa1.72□□□□□ -2.13
MSN5YDR335W UFD4P33202 1483 aa1.72□□□□□ -2.13
MSN5YDR335W THS1P04801 734 aaKnown RBP1.71□□□□□ -2.14
MSN5YDR335W SRS2P12954 1174 aa1.71□□□□□ -2.14
MSN5YDR335W HAP4P14064 554 aa1.71□□□□□ -2.14
MSN5YDR335W PDC6P26263 563 aaKnown RBP1.71□□□□□ -2.14
MSN5YDR335W ATG16Q03818 150 aa1.71□□□□□ -2.14
MSN5YDR335W YLR125WQ12138 136 aa1.71□□□□□ -2.14
MSN5YDR335W REC8Q12188 680 aa1.71□□□□□ -2.14
MSN5YDR335W TRM732Q03496 1420 aa1.71□□□□□ -2.14
MSN5YDR335W ABZ1P37254 787 aaPredicted RBP1.71□□□□□ -2.14
MSN5YDR335W DSS1P39112 969 aa1.71□□□□□ -2.14
MSN5YDR335W BOI2P39969 1040 aa1.71□□□□□ -2.14
MSN5YDR335W FIR1P40020 876 aa1.71□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 37.2 ms