RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	SRP54	P20424	541 aa	Known RBP	8.35	□□□□□ -1.07
SKP1	YDR328C	SWI4	P25302	1093 aa	Known RBP	8.35	□□□□□ -1.07
SKP1	YDR328C	RPL8B	P29453	256 aa	Known RBP	8.35	□□□□□ -1.07
SKP1	YDR328C	PRX1	P34227	261 aa	Known RBP	8.35	□□□□□ -1.07
SKP1	YDR328C	TPS3	P38426	1054 aa	Known RBP	8.35	□□□□□ -1.07
SKP1	YDR328C	HYR1	P40581	163 aa	Known RBP	8.35	□□□□□ -1.07
SKP1	YDR328C	BUD6	P41697	788 aa		8.35	□□□□□ -1.07
SKP1	YDR328C	ENT3	P47160	408 aa		8.35	□□□□□ -1.07
SKP1	YDR328C	PEX21	P50091	288 aa		8.35	□□□□□ -1.07
SKP1	YDR328C	HST1	P53685	503 aa		8.35	□□□□□ -1.07
SKP1	YDR328C	FOL1	P53848	824 aa		8.35	□□□□□ -1.07
SKP1	YDR328C	NUC1	P08466	329 aa		8.34	□□□□□ -1.07
SKP1	YDR328C	ACE2	P21192	770 aa		8.34	□□□□□ -1.07
SKP1	YDR328C	SPB4	P25808	606 aa	Predicted RBP	8.34	□□□□□ -1.07
SKP1	YDR328C	VHR2	P40041	505 aa		8.34	□□□□□ -1.07
SKP1	YDR328C	DJP1	P40564	432 aa		8.34	□□□□□ -1.07
SKP1	YDR328C	HAP5	Q02516	242 aa		8.34	□□□□□ -1.07
SKP1	YDR328C	VPS30	Q02948	557 aa		8.34	□□□□□ -1.07
SKP1	YDR328C	CWC15	Q03772	175 aa	Known RBP	8.34	□□□□□ -1.07
SKP1	YDR328C	LAP2	Q10740	671 aa		8.34	□□□□□ -1.07
SKP1	YDR328C	DIT2	P21595	489 aa		8.33	□□□□□ -1.08
SKP1	YDR328C	SSA4	P22202	642 aa	Known RBP	8.33	□□□□□ -1.08
SKP1	YDR328C	MBR1	P23493	339 aa		8.33	□□□□□ -1.08
SKP1	YDR328C	MSP1	P28737	362 aa		8.33	□□□□□ -1.08
SKP1	YDR328C	MAL33	P38157	468 aa		8.33	□□□□□ -1.08
SKP1	YDR328C	RFC5	P38251	354 aa		8.33	□□□□□ -1.08
SKP1	YDR328C	RPN10	P38886	268 aa	Known RBP	8.33	□□□□□ -1.08
SKP1	YDR328C	TIF4631	P39935	952 aa	Known RBP	8.33	□□□□□ -1.08
SKP1	YDR328C	PEX14	P53112	341 aa		8.33	□□□□□ -1.08
SKP1	YDR328C	DSE3	Q08729	430 aa		8.33	□□□□□ -1.08
SKP1	YDR328C	HCA4	P20448	770 aa	Known RBP	8.32	□□□□□ -1.08
SKP1	YDR328C	RXT2	P38255	430 aa		8.32	□□□□□ -1.08
SKP1	YDR328C	TOM71	P38825	639 aa	Known RBP	8.32	□□□□□ -1.08
SKP1	YDR328C	ACA1	P39970	489 aa		8.32	□□□□□ -1.08
SKP1	YDR328C	YIL089W	P40500	205 aa		8.32	□□□□□ -1.08
SKP1	YDR328C	PCI8	P40512	444 aa		8.32	□□□□□ -1.08
SKP1	YDR328C	MDM1	Q01846	1127 aa		8.32	□□□□□ -1.08
SKP1	YDR328C	GDE1	Q02979	1223 aa		8.32	□□□□□ -1.08
SKP1	YDR328C	TYW1	Q08960	810 aa	Known RBP	8.32	□□□□□ -1.08
SKP1	YDR328C	MET6	P05694	767 aa	Known RBP	8.31	□□□□□ -1.08
SKP1	YDR328C	CDC6	P09119	513 aa		8.31	□□□□□ -1.08
SKP1	YDR328C	SAM2	P19358	384 aa	Known RBP	8.31	□□□□□ -1.08
SKP1	YDR328C	RDS1	P25611	832 aa		8.31	□□□□□ -1.08
SKP1	YDR328C	PNT1	P38969	423 aa		8.31	□□□□□ -1.08
SKP1	YDR328C	UBP9	P39967	754 aa		8.31	□□□□□ -1.08
SKP1	YDR328C	CIR1	P42940	261 aa		8.31	□□□□□ -1.08
SKP1	YDR328C	YGL081W	P53156	320 aa		8.31	□□□□□ -1.08
SKP1	YDR328C	EAF7	P53911	425 aa	Known RBP	8.31	□□□□□ -1.08
SKP1	YDR328C	YDR341C	Q05506	607 aa	Known RBP	8.31	□□□□□ -1.08
SKP1	YDR328C	HSP82	P02829	709 aa	Known RBP	8.3	□□□□□ -1.08
SKP1	YDR328C	ERG12	P07277	443 aa		8.3	□□□□□ -1.08
SKP1	YDR328C	PGI1	P12709	554 aa	Known RBP	8.3	□□□□□ -1.08
SKP1	YDR328C	ROX1	P25042	368 aa		8.3	□□□□□ -1.08
SKP1	YDR328C	ASF1	P32447	279 aa		8.3	□□□□□ -1.08
SKP1	YDR328C	ELM1	P32801	640 aa		8.3	□□□□□ -1.08
SKP1	YDR328C	SNF7	P39929	240 aa	Known RBP	8.3	□□□□□ -1.08
SKP1	YDR328C	RRT6	P53117	311 aa	Predicted RBP	8.3	□□□□□ -1.08
SKP1	YDR328C	YGL138C	P53122	345 aa		8.3	□□□□□ -1.08
SKP1	YDR328C	PEX19	Q07418	342 aa		8.3	□□□□□ -1.08
SKP1	YDR328C	DCS2	Q12123	353 aa		8.3	□□□□□ -1.08
SKP1	YDR328C	GIN4	Q12263	1142 aa		8.3	□□□□□ -1.08
SKP1	YDR328C	KRS1	P15180	591 aa	Known RBP	8.29	□□□□□ -1.08
SKP1	YDR328C	VPS1	P21576	704 aa	Known RBP	8.29	□□□□□ -1.08
SKP1	YDR328C	SPT21	P35209	758 aa		8.29	□□□□□ -1.08
SKP1	YDR328C	VPS45	P38932	577 aa		8.29	□□□□□ -1.08
SKP1	YDR328C	SOL4	P53315	255 aa		8.29	□□□□□ -1.08
SKP1	YDR328C	SUB2	Q07478	446 aa	Known RBP	8.29	□□□□□ -1.08
SKP1	YDR328C	CIT1	P00890	479 aa		8.28	□□□□□ -1.08
SKP1	YDR328C	KEX1	P09620	729 aa		8.28	□□□□□ -1.08
SKP1	YDR328C	STI1	P15705	589 aa	Known RBP RIP-Chip data	8.28	□□□□□ -1.08	not detected
SKP1	YDR328C	CCT3	P39077	534 aa	Known RBP	8.28	□□□□□ -1.08
SKP1	YDR328C	FAR11	P53917	953 aa		8.28	□□□□□ -1.08
SKP1	YDR328C	GET3	Q12154	354 aa	Known RBP	8.28	□□□□□ -1.08
SKP1	YDR328C	CEX1	Q12453	761 aa		8.28	□□□□□ -1.08
SKP1	YDR328C	AIM44	Q99299	758 aa		8.28	□□□□□ -1.08
SKP1	YDR328C	FRS2	P15625	503 aa	Known RBP	8.27	□□□□□ -1.09
SKP1	YDR328C	OCT1	P35999	772 aa		8.27	□□□□□ -1.09
SKP1	YDR328C	ASE1	P50275	885 aa		8.27	□□□□□ -1.09
SKP1	YDR328C	PIL1	P53252	339 aa	Known RBP	8.27	□□□□□ -1.09
SKP1	YDR328C	KRE33	P53914	1056 aa	Known RBP	8.27	□□□□□ -1.09
SKP1	YDR328C	COG8	Q04632	607 aa		8.27	□□□□□ -1.09
SKP1	YDR328C	FBP1	P09201	348 aa		8.26	□□□□□ -1.09
SKP1	YDR328C	MAK11	P20484	414 aa	Known RBP	8.26	□□□□□ -1.09
SKP1	YDR328C	SEC20	P28791	383 aa		8.26	□□□□□ -1.09
SKP1	YDR328C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	8.26	□□□□□ -1.09	not detected
SKP1	YDR328C	RFT1	P38206	574 aa	Predicted RBP	8.26	□□□□□ -1.09
SKP1	YDR328C	CCT5	P40413	562 aa	Known RBP	8.26	□□□□□ -1.09
SKP1	YDR328C	NAF1	P53919	492 aa	Known RBP	8.26	□□□□□ -1.09
SKP1	YDR328C	YML037C	Q03703	340 aa		8.26	□□□□□ -1.09
SKP1	YDR328C	SUE1	Q06524	206 aa		8.26	□□□□□ -1.09
SKP1	YDR328C	UTP4	Q06679	776 aa	Known RBP	8.26	□□□□□ -1.09
SKP1	YDR328C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	8.26	□□□□□ -1.09	not detected
SKP1	YDR328C	ARL1	P38116	183 aa	Known RBP	8.25	□□□□□ -1.09
SKP1	YDR328C	YJL007C	P47080	104 aa		8.25	□□□□□ -1.09
SKP1	YDR328C	LSB1	P53281	241 aa		8.25	□□□□□ -1.09
SKP1	YDR328C	RET3	P53600	189 aa		8.25	□□□□□ -1.09
SKP1	YDR328C	PEX29	Q03370	554 aa		8.25	□□□□□ -1.09
SKP1	YDR328C	GIS4	Q04233	774 aa		8.25	□□□□□ -1.09
SKP1	YDR328C	VIP1	Q06685	1146 aa	Known RBP	8.25	□□□□□ -1.09
SKP1	YDR328C	APC11	Q12157	165 aa		8.25	□□□□□ -1.09

Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms