RNA–Protein interactions for RNA: YDR022C

ATG31, Transcript of Autophagy-specific protein required for autophagosome formation, yeast

Gene ATG31, Length 591 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG31	YDR022C	SUB2	Q07478	446 aa	Known RBP	4.99	□□□□□ -1.61
ATG31	YDR022C	COB	P00163	385 aa		4.98	□□□□□ -1.61
ATG31	YDR022C	PRP5	P21372	849 aa	Predicted RBP	4.98	□□□□□ -1.61
ATG31	YDR022C	REI1	P38344	393 aa	Predicted RBP	4.98	□□□□□ -1.61
ATG31	YDR022C	ALT1	P52893	592 aa		4.98	□□□□□ -1.61
ATG31	YDR022C	ATG1	P53104	897 aa		4.98	□□□□□ -1.61
ATG31	YDR022C	MSH4	P40965	878 aa	Predicted RBP	4.97	□□□□□ -1.61
ATG31	YDR022C	BSC2	Q05611	235 aa		4.97	□□□□□ -1.61
ATG31	YDR022C	PMT7	Q06644	662 aa		4.97	□□□□□ -1.61
ATG31	YDR022C	TRE1	Q08919	783 aa		4.97	□□□□□ -1.61
ATG31	YDR022C	YCR015C	P25616	317 aa		4.96	□□□□□ -1.62
ATG31	YDR022C	ARL1	P38116	183 aa	Known RBP	4.96	□□□□□ -1.62
ATG31	YDR022C	ACF4	P47129	309 aa		4.96	□□□□□ -1.62
ATG31	YDR022C	YNL011C	P53980	444 aa		4.96	□□□□□ -1.62
ATG31	YDR022C	ORC3	P54790	616 aa		4.96	□□□□□ -1.62
ATG31	YDR022C	SMY2	P32909	740 aa	Known RBP	4.95	□□□□□ -1.62
ATG31	YDR022C	NNK1	P36003	928 aa		4.95	□□□□□ -1.62
ATG31	YDR022C	TRS120	Q04183	1289 aa		4.95	□□□□□ -1.62
ATG31	YDR022C	AVO1	Q08236	1176 aa		4.95	□□□□□ -1.62
ATG31	YDR022C	ALG6	Q12001	544 aa	Known RBP	4.95	□□□□□ -1.62
ATG31	YDR022C	RLF2	Q12495	606 aa		4.95	□□□□□ -1.62
ATG31	YDR022C	NFS1	P25374	497 aa		4.94	□□□□□ -1.62
ATG31	YDR022C	CDC55	Q00362	526 aa		4.94	□□□□□ -1.62
ATG31	YDR022C	CDA2	Q06703	312 aa		4.94	□□□□□ -1.62
ATG31	YDR022C	ESC8	Q08119	714 aa		4.94	□□□□□ -1.62
ATG31	YDR022C	YVC1	Q12324	675 aa		4.94	□□□□□ -1.62
ATG31	YDR022C	SAP155	P43612	1002 aa		4.93	□□□□□ -1.62
ATG31	YDR022C	SSY1	Q03770	852 aa		4.93	□□□□□ -1.62
ATG31	YDR022C	FLP1	P03870	423 aa		4.92	□□□□□ -1.62
ATG31	YDR022C	PRO1	P32264	428 aa		4.92	□□□□□ -1.62
ATG31	YDR022C	SHU2	P38957	223 aa		4.92	□□□□□ -1.62
ATG31	YDR022C	NUT1	P53114	1132 aa		4.92	□□□□□ -1.62
ATG31	YDR022C	ELA1	P53861	379 aa	Predicted RBP	4.92	□□□□□ -1.62
ATG31	YDR022C	YAF9	P53930	226 aa		4.92	□□□□□ -1.62
ATG31	YDR022C	DUR3	P33413	735 aa		4.91	□□□□□ -1.62
ATG31	YDR022C	TSA1	P34760	196 aa	Known RBP	4.91	□□□□□ -1.62
ATG31	YDR022C	YKL077W	P36081	392 aa		4.91	□□□□□ -1.62
ATG31	YDR022C	YGR045C	P53229	120 aa		4.91	□□□□□ -1.62
ATG31	YDR022C	EAR1	Q03212	550 aa		4.91	□□□□□ -1.62
ATG31	YDR022C	MCM5	P29496	775 aa	Known RBP	4.9	□□□□□ -1.63
ATG31	YDR022C	PEX7	P39108	375 aa		4.9	□□□□□ -1.63
ATG31	YDR022C	RVS167	P39743	482 aa	Known RBP	4.9	□□□□□ -1.63
ATG31	YDR022C	PTC7	P38797	343 aa		4.89	□□□□□ -1.63
ATG31	YDR022C	LPX1	Q12405	387 aa	Known RBP	4.89	□□□□□ -1.63
ATG31	YDR022C	PRP6	P19735	899 aa	Predicted RBP	4.88	□□□□□ -1.63
ATG31	YDR022C	GIP4	P39732	760 aa		4.88	□□□□□ -1.63
ATG31	YDR022C	INP54	Q08227	384 aa	Known RBP	4.88	□□□□□ -1.63
ATG31	YDR022C	PUS7	Q08647	676 aa	Known RBP	4.88	□□□□□ -1.63
ATG31	YDR022C	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.87	□□□□□ -1.63
ATG31	YDR022C	TY1A-DR6	P0CX70	440 aa		4.87	□□□□□ -1.63
ATG31	YDR022C	TY1A-ER1	P0CX71	440 aa		4.87	□□□□□ -1.63
ATG31	YDR022C	TY1A-LR2	P0CX72	440 aa		4.87	□□□□□ -1.63
ATG31	YDR022C	TY1A-PL	P0CX73	440 aa		4.87	□□□□□ -1.63
ATG31	YDR022C	TY1A-JR1	P0CX74	440 aa		4.87	□□□□□ -1.63
ATG31	YDR022C	TY1A-LR3	P0CX75	440 aa		4.87	□□□□□ -1.63
ATG31	YDR022C	TY1A-ML2	P0CX76	440 aa		4.87	□□□□□ -1.63
ATG31	YDR022C	GTS1	P40956	396 aa		4.87	□□□□□ -1.63
ATG31	YDR022C	FOL2	P51601	243 aa	Known RBP	4.87	□□□□□ -1.63
ATG31	YDR022C	TPP1	Q03796	238 aa		4.87	□□□□□ -1.63
ATG31	YDR022C	TY1A-GR1	Q12085	440 aa		4.87	□□□□□ -1.63
ATG31	YDR022C	MNL2	Q12205	849 aa		4.87	□□□□□ -1.63
ATG31	YDR022C	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.87	□□□□□ -1.63
ATG31	YDR022C	TY1A-OL	Q92392	440 aa	Known RBP	4.87	□□□□□ -1.63
ATG31	YDR022C	ATG14	P38270	344 aa		4.86	□□□□□ -1.63
ATG31	YDR022C	HSE1	P38753	452 aa		4.86	□□□□□ -1.63
ATG31	YDR022C	MTR4	P47047	1073 aa	Known RBP	4.86	□□□□□ -1.63
ATG31	YDR022C	SAM37	P50110	327 aa		4.86	□□□□□ -1.63
ATG31	YDR022C	NOC3	Q07896	663 aa	Predicted RBP	4.86	□□□□□ -1.63
ATG31	YDR022C	THI80	P35202	319 aa		4.85	□□□□□ -1.63
ATG31	YDR022C	GRS1	P38088	690 aa	Known RBP	4.85	□□□□□ -1.63
ATG31	YDR022C	CIC1	P38779	376 aa	Known RBP	4.85	□□□□□ -1.63
ATG31	YDR022C	YAR028W	P39548	234 aa		4.85	□□□□□ -1.63
ATG31	YDR022C	MON1	P53129	644 aa		4.85	□□□□□ -1.63
ATG31	YDR022C	RIM8	P53179	542 aa		4.85	□□□□□ -1.63
ATG31	YDR022C	MRPL22	P53881	309 aa		4.85	□□□□□ -1.63
ATG31	YDR022C	HRK1	Q08732	759 aa	Known RBP	4.85	□□□□□ -1.63
ATG31	YDR022C	SSA1	P10591	642 aa	Known RBP	4.84	□□□□□ -1.63
ATG31	YDR022C	EXO5	P38289	585 aa		4.84	□□□□□ -1.63
ATG31	YDR022C	YHL012W	P38709	493 aa		4.84	□□□□□ -1.63
ATG31	YDR022C	TAF1	P46677	1066 aa		4.84	□□□□□ -1.63
ATG31	YDR022C	LAP2	Q10740	671 aa		4.84	□□□□□ -1.63
ATG31	YDR022C	MDL2	P33311	773 aa		4.83	□□□□□ -1.64
ATG31	YDR022C	AIM3	P38266	947 aa	Known RBP	4.83	□□□□□ -1.64
ATG31	YDR022C	TRL1	P09880	827 aa	Known RBP	4.82	□□□□□ -1.64
ATG31	YDR022C	RET1	P22276	1149 aa	Known RBP	4.82	□□□□□ -1.64
ATG31	YDR022C	CDC3	P32457	520 aa	Known RBP	4.82	□□□□□ -1.64
ATG31	YDR022C	FLR1	P38124	548 aa		4.82	□□□□□ -1.64
ATG31	YDR022C	SLS1	P42900	643 aa		4.82	□□□□□ -1.64
ATG31	YDR022C	SNO2	P53823	222 aa		4.82	□□□□□ -1.64
ATG31	YDR022C	YLR257W	Q06146	321 aa	Known RBP	4.82	□□□□□ -1.64
ATG31	YDR022C	YCS4	Q06156	1176 aa		4.82	□□□□□ -1.64
ATG31	YDR022C	SOD2	P00447	233 aa		4.81	□□□□□ -1.64
ATG31	YDR022C	ETP1	P38748	585 aa	Known RBP	4.81	□□□□□ -1.64
ATG31	YDR022C	NEM1	P38757	446 aa		4.81	□□□□□ -1.64
ATG31	YDR022C	NOG1	Q02892	647 aa	Known RBP	4.81	□□□□□ -1.64
ATG31	YDR022C	HDA2	Q06629	674 aa		4.81	□□□□□ -1.64
ATG31	YDR022C	YDL177C	Q12257	170 aa		4.81	□□□□□ -1.64
ATG31	YDR022C	RSA3	Q05942	220 aa	Known RBP	4.8	□□□□□ -1.64
ATG31	YDR022C	SAM35	P14693	329 aa		4.79	□□□□□ -1.64
ATG31	YDR022C	SRO9	P25567	434 aa	Known RBP	4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms