RNA–Protein interactions for RNA: YDL212W

SHR3, Transcript of Endoplasmic reticulum packaging chaperone, yeastyeast

Gene SHR3, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR3YDL212W YIG1Q08956 461 aa7.02□□□□□ -1.29
SHR3YDL212W TY1A-GR1Q12085 440 aa7.02□□□□□ -1.29
SHR3YDL212W TY1A-PR3Q6Q5H1 440 aaKnown RBP7.02□□□□□ -1.29
SHR3YDL212W TY1A-OLQ92392 440 aaKnown RBP7.02□□□□□ -1.29
SHR3YDL212W PGM1P33401 570 aaKnown RBP7.01□□□□□ -1.29
SHR3YDL212W FAA3P39002 694 aa7.01□□□□□ -1.29
SHR3YDL212W RVS167P39743 482 aaKnown RBP7.01□□□□□ -1.29
SHR3YDL212W KIP3P53086 805 aaKnown RBP7.01□□□□□ -1.29
SHR3YDL212W DAL4Q04895 635 aa7.01□□□□□ -1.29
SHR3YDL212W NCE103P53615 221 aa7□□□□□ -1.29
SHR3YDL212W REC8Q12188 680 aa7□□□□□ -1.29
SHR3YDL212W RSC6P25632 483 aa6.99□□□□□ -1.29
SHR3YDL212W POL32P47110 350 aa6.99□□□□□ -1.29
SHR3YDL212W EXO5P38289 585 aa6.98□□□□□ -1.29
SHR3YDL212W UTP22P53254 1237 aaPredicted RBP6.98□□□□□ -1.29
SHR3YDL212W HEM3P28789 327 aa6.97□□□□□ -1.29
SHR3YDL212W ULP1Q02724 621 aa6.97□□□□□ -1.29
SHR3YDL212W HXK1P04806 485 aaKnown RBP6.96□□□□□ -1.3
SHR3YDL212W AKR1P39010 764 aa6.96□□□□□ -1.3
SHR3YDL212W GCV1P48015 400 aa6.96□□□□□ -1.3
SHR3YDL212W FAR11P53917 953 aa6.96□□□□□ -1.3
SHR3YDL212W YMR074CQ04773 145 aa6.96□□□□□ -1.3
SHR3YDL212W OXR1Q08952 273 aa6.96□□□□□ -1.3
SHR3YDL212W MCM2P29469 868 aa6.95□□□□□ -1.3
SHR3YDL212W NAM7P30771 971 aaKnown RBP6.95□□□□□ -1.3
SHR3YDL212W MEC3Q02574 474 aa6.95□□□□□ -1.3
SHR3YDL212W NOG1Q02892 647 aaKnown RBP6.95□□□□□ -1.3
SHR3YDL212W YPL109CQ02981 657 aa6.95□□□□□ -1.3
SHR3YDL212W NEM1P38757 446 aa6.94□□□□□ -1.3
SHR3YDL212W FYV10P40492 516 aa6.94□□□□□ -1.3
SHR3YDL212W ALG6Q12001 544 aaKnown RBP6.94□□□□□ -1.3
SHR3YDL212W YOR223WQ12015 292 aa6.94□□□□□ -1.3
SHR3YDL212W SLS1P42900 643 aa6.93□□□□□ -1.3
SHR3YDL212W YJR107WP47145 328 aa6.93□□□□□ -1.3
SHR3YDL212W YLR122CQ12312 125 aa6.93□□□□□ -1.3
SHR3YDL212W KAR2P16474 682 aaKnown RBP6.92□□□□□ -1.3
SHR3YDL212W MSH3P25336 1018 aa6.92□□□□□ -1.3
SHR3YDL212W GPT2P36148 743 aa6.92□□□□□ -1.3
SHR3YDL212W PIC2P40035 300 aa6.92□□□□□ -1.3
SHR3YDL212W RSM26P47141 266 aa6.92□□□□□ -1.3
SHR3YDL212W YGR122WP53272 402 aa6.92□□□□□ -1.3
SHR3YDL212W PEX13P80667 386 aa6.92□□□□□ -1.3
SHR3YDL212W DOT1Q04089 582 aaKnown RBP6.92□□□□□ -1.3
SHR3YDL212W PUF3Q07807 879 aaKnown RBP RIP-Chip data6.92□□□□□ -1.3not detected
SHR3YDL212W REI1P38344 393 aaPredicted RBP6.91□□□□□ -1.3
SHR3YDL212W SAF1P38352 637 aa6.91□□□□□ -1.3
SHR3YDL212W ADI1Q03677 179 aa6.91□□□□□ -1.3
SHR3YDL212W SPR28Q04921 423 aa6.91□□□□□ -1.3
SHR3YDL212W HEM13P11353 328 aaKnown RBP6.9□□□□□ -1.3
SHR3YDL212W COQ2P32378 372 aa6.9□□□□□ -1.3
SHR3YDL212W YKL077WP36081 392 aa6.9□□□□□ -1.3
SHR3YDL212W MGE1P38523 228 aa6.9□□□□□ -1.3
SHR3YDL212W PEX28P38848 579 aa6.9□□□□□ -1.3
SHR3YDL212W RPS26AP39938 119 aaKnown RBP6.9□□□□□ -1.3
SHR3YDL212W RPS26BP39939 119 aaKnown RBP6.9□□□□□ -1.3
SHR3YDL212W CYC8P14922 966 aa6.89□□□□□ -1.31
SHR3YDL212W SHU2P38957 223 aa6.89□□□□□ -1.31
SHR3YDL212W GLT1Q12680 2145 aaKnown RBP6.88□□□□□ -1.31
SHR3YDL212W SEC8P32855 1065 aa6.88□□□□□ -1.31
SHR3YDL212W SQT1P35184 431 aa6.88□□□□□ -1.31
SHR3YDL212W YGL140CP53120 1219 aa6.88□□□□□ -1.31
SHR3YDL212W GIC2Q06648 383 aa6.88□□□□□ -1.31
SHR3YDL212W YLL054CQ12244 843 aa6.88□□□□□ -1.31
SHR3YDL212W RAD2P07276 1031 aa6.87□□□□□ -1.31
SHR3YDL212W RDH54P38086 958 aa6.87□□□□□ -1.31
SHR3YDL212W ARL1P38116 183 aaKnown RBP6.87□□□□□ -1.31
SHR3YDL212W SPO74P45819 413 aa6.87□□□□□ -1.31
SHR3YDL212W YGR045CP53229 120 aa6.87□□□□□ -1.31
SHR3YDL212W UTP5Q04177 643 aaKnown RBP6.87□□□□□ -1.31
SHR3YDL212W TRP3P00937 484 aa6.86□□□□□ -1.31
SHR3YDL212W SEC23P15303 768 aaKnown RBP6.86□□□□□ -1.31
SHR3YDL212W ELA1P53861 379 aaPredicted RBP6.86□□□□□ -1.31
SHR3YDL212W SBP1P10080 294 aaKnown RBP6.85□□□□□ -1.31
SHR3YDL212W PRE9P23638 258 aaKnown RBP6.85□□□□□ -1.31
SHR3YDL212W KAE1P36132 386 aa6.85□□□□□ -1.31
SHR3YDL212W YKR073CP36153 106 aa6.85□□□□□ -1.31
SHR3YDL212W MSH4P40965 878 aaPredicted RBP6.85□□□□□ -1.31
SHR3YDL212W ASF1P32447 279 aa6.84□□□□□ -1.31
SHR3YDL212W XKS1P42826 600 aa6.84□□□□□ -1.31
SHR3YDL212W YGR130CP53278 816 aa6.84□□□□□ -1.31
SHR3YDL212W ALO1P54783 526 aaKnown RBP6.84□□□□□ -1.31
SHR3YDL212W EAR1Q03212 550 aa6.84□□□□□ -1.31
SHR3YDL212W OYE2Q03558 400 aaKnown RBP6.84□□□□□ -1.31
SHR3YDL212W CHS2P14180 963 aa6.83□□□□□ -1.32
SHR3YDL212W MRPS18P42847 217 aa6.83□□□□□ -1.32
SHR3YDL212W MTR4P47047 1073 aaKnown RBP6.83□□□□□ -1.32
SHR3YDL212W MCD1Q12158 566 aa6.83□□□□□ -1.32
SHR3YDL212W VMA4P22203 233 aaKnown RBP6.82□□□□□ -1.32
SHR3YDL212W WHI3P34761 661 aaKnown RBP6.82□□□□□ -1.32
SHR3YDL212W AVO1Q08236 1176 aa6.82□□□□□ -1.32
SHR3YDL212W SCP160P06105 1222 aaKnown RBP RIP-Chip data6.81□□□□□ -1.32not detected
SHR3YDL212W ALT1P52893 592 aa6.81□□□□□ -1.32
SHR3YDL212W RPS4AP0CX35 261 aaKnown RBP6.8□□□□□ -1.32
SHR3YDL212W RPS4BP0CX36 261 aaKnown RBP6.8□□□□□ -1.32
SHR3YDL212W YAR028WP39548 234 aa6.8□□□□□ -1.32
SHR3YDL212W GNP1P48813 663 aa6.8□□□□□ -1.32
SHR3YDL212W HDA2Q06629 674 aa6.8□□□□□ -1.32
SHR3YDL212W MSB1P21339 1137 aaKnown RBP6.79□□□□□ -1.32
SHR3YDL212W NFS1P25374 497 aa6.79□□□□□ -1.32
SHR3YDL212W SMY2P32909 740 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 31.4 ms