RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C RIM11P38615 370 aa4.93□□□□□ -1.62
RRP42YDL111C SDH1Q00711 640 aa4.93□□□□□ -1.62
RRP42YDL111C ATE1P16639 503 aa4.92□□□□□ -1.62
RRP42YDL111C PRP5P21372 849 aaPredicted RBP4.92□□□□□ -1.62
RRP42YDL111C DUR3P33413 735 aa4.92□□□□□ -1.62
RRP42YDL111C MGE1P38523 228 aa4.92□□□□□ -1.62
RRP42YDL111C THI12P42883 340 aa4.92□□□□□ -1.62
RRP42YDL111C THI5P43534 340 aa4.92□□□□□ -1.62
RRP42YDL111C THI11P47183 340 aa4.92□□□□□ -1.62
RRP42YDL111C NUT2Q06213 157 aa4.92□□□□□ -1.62
RRP42YDL111C THI13Q07748 340 aa4.92□□□□□ -1.62
RRP42YDL111C YOR223WQ12015 292 aa4.92□□□□□ -1.62
RRP42YDL111C WHI5Q12416 295 aa4.92□□□□□ -1.62
RRP42YDL111C GCD1P09032 578 aaPredicted RBP4.91□□□□□ -1.62
RRP42YDL111C NPR1P22211 790 aa4.91□□□□□ -1.62
RRP42YDL111C NAP1P25293 417 aaKnown RBP4.91□□□□□ -1.62
RRP42YDL111C MMM1P41800 426 aa4.91□□□□□ -1.62
RRP42YDL111C ECL1P48235 211 aa4.91□□□□□ -1.62
RRP42YDL111C MNL2Q12205 849 aa4.91□□□□□ -1.62
RRP42YDL111C CMR1Q12510 522 aaKnown RBP4.91□□□□□ -1.62
RRP42YDL111C SEG2P34250 1132 aa4.9□□□□□ -1.63
RRP42YDL111C YJR107WP47145 328 aa4.9□□□□□ -1.63
RRP42YDL111C GCV1P48015 400 aa4.9□□□□□ -1.63
RRP42YDL111C YNL011CP53980 444 aa4.9□□□□□ -1.63
RRP42YDL111C MSH6Q03834 1242 aa4.9□□□□□ -1.63
RRP42YDL111C YMR074CQ04773 145 aa4.9□□□□□ -1.63
RRP42YDL111C YIG1Q08956 461 aa4.9□□□□□ -1.63
RRP42YDL111C YLL054CQ12244 843 aa4.9□□□□□ -1.63
RRP42YDL111C FRT1Q99332 602 aa4.9□□□□□ -1.63
RRP42YDL111C LRG1P35688 1017 aa4.89□□□□□ -1.63
RRP42YDL111C YKL222CP35995 705 aa4.89□□□□□ -1.63
RRP42YDL111C GPT2P36148 743 aa4.89□□□□□ -1.63
RRP42YDL111C NIT1P40447 199 aa4.89□□□□□ -1.63
RRP42YDL111C CIT3P43635 486 aa4.89□□□□□ -1.63
RRP42YDL111C TRS120Q04183 1289 aa4.89□□□□□ -1.63
RRP42YDL111C NSI1Q12457 570 aa4.89□□□□□ -1.63
RRP42YDL111C YTA7P40340 1379 aa4.89□□□□□ -1.63
RRP42YDL111C HTS1P07263 546 aaKnown RBP4.88□□□□□ -1.63
RRP42YDL111C SEC8P32855 1065 aa4.88□□□□□ -1.63
RRP42YDL111C POL12P38121 705 aaPredicted RBP4.88□□□□□ -1.63
RRP42YDL111C ECM2P38241 364 aaKnown RBP4.88□□□□□ -1.63
RRP42YDL111C SAP155P43612 1002 aa4.88□□□□□ -1.63
RRP42YDL111C YOR059CQ08448 450 aaKnown RBP4.88□□□□□ -1.63
RRP42YDL111C DFG16Q99234 619 aa4.88□□□□□ -1.63
RRP42YDL111C FLP1P03870 423 aa4.87□□□□□ -1.63
RRP42YDL111C MET4P32389 672 aa4.87□□□□□ -1.63
RRP42YDL111C WHI3P34761 661 aaKnown RBP4.87□□□□□ -1.63
RRP42YDL111C OCA5P38738 679 aa4.87□□□□□ -1.63
RRP42YDL111C CDC55Q00362 526 aa4.87□□□□□ -1.63
RRP42YDL111C MEC3Q02574 474 aa4.87□□□□□ -1.63
RRP42YDL111C OYE2Q03558 400 aaKnown RBP4.87□□□□□ -1.63
RRP42YDL111C DOT1Q04089 582 aaKnown RBP4.87□□□□□ -1.63
RRP42YDL111C BSC2Q05611 235 aa4.86□□□□□ -1.63
RRP42YDL111C NNF1P47149 201 aa4.85□□□□□ -1.63
RRP42YDL111C UTP22P53254 1237 aaPredicted RBP4.85□□□□□ -1.63
RRP42YDL111C RCM1P53972 490 aa4.85□□□□□ -1.63
RRP42YDL111C YHL008CP38750 627 aa4.84□□□□□ -1.63
RRP42YDL111C NUT1P53114 1132 aa4.84□□□□□ -1.63
RRP42YDL111C PRP43P53131 767 aaKnown RBP4.84□□□□□ -1.63
RRP42YDL111C PHO4P07270 312 aaKnown RBP4.83□□□□□ -1.64
RRP42YDL111C RPS4AP0CX35 261 aaKnown RBP4.83□□□□□ -1.64
RRP42YDL111C RPS4BP0CX36 261 aaKnown RBP4.83□□□□□ -1.64
RRP42YDL111C GCD6P32501 712 aaKnown RBP4.83□□□□□ -1.64
RRP42YDL111C REI1P38344 393 aaPredicted RBP4.83□□□□□ -1.64
RRP42YDL111C OYE3P41816 400 aaPredicted RBP4.83□□□□□ -1.64
RRP42YDL111C RMD1Q03441 430 aa4.83□□□□□ -1.64
RRP42YDL111C FPR4Q06205 392 aaPredicted RBP4.83□□□□□ -1.64
RRP42YDL111C PMT7Q06644 662 aa4.83□□□□□ -1.64
RRP42YDL111C GAS1P22146 559 aaKnown RBP4.82□□□□□ -1.64
RRP42YDL111C ARL1P38116 183 aaKnown RBP4.82□□□□□ -1.64
RRP42YDL111C MSH4P40965 878 aaPredicted RBP4.82□□□□□ -1.64
RRP42YDL111C YAF9P53930 226 aa4.82□□□□□ -1.64
RRP42YDL111C GPI13Q07830 1017 aa4.82□□□□□ -1.64
RRP42YDL111C HSP78P33416 811 aa4.81□□□□□ -1.64
RRP42YDL111C ORC3P54790 616 aa4.81□□□□□ -1.64
RRP42YDL111C JIP5Q06214 492 aaPredicted RBP4.81□□□□□ -1.64
RRP42YDL111C INP54Q08227 384 aaKnown RBP4.81□□□□□ -1.64
RRP42YDL111C ALG6Q12001 544 aaKnown RBP4.81□□□□□ -1.64
RRP42YDL111C YCR015CP25616 317 aa4.8□□□□□ -1.64
RRP42YDL111C VPS35P34110 944 aa4.8□□□□□ -1.64
RRP42YDL111C RVS167P39743 482 aaKnown RBP4.8□□□□□ -1.64
RRP42YDL111C ALT1P52893 592 aa4.8□□□□□ -1.64
RRP42YDL111C YGR045CP53229 120 aa4.8□□□□□ -1.64
RRP42YDL111C EAR1Q03212 550 aa4.8□□□□□ -1.64
RRP42YDL111C TY1A-LR4P0C2I8 440 aaKnown RBP4.79□□□□□ -1.64
RRP42YDL111C TY1A-DR6P0CX70 440 aa4.79□□□□□ -1.64
RRP42YDL111C TY1A-ER1P0CX71 440 aa4.79□□□□□ -1.64
RRP42YDL111C TY1A-LR2P0CX72 440 aa4.79□□□□□ -1.64
RRP42YDL111C TY1A-PLP0CX73 440 aa4.79□□□□□ -1.64
RRP42YDL111C TY1A-JR1P0CX74 440 aa4.79□□□□□ -1.64
RRP42YDL111C TY1A-LR3P0CX75 440 aa4.79□□□□□ -1.64
RRP42YDL111C TY1A-ML2P0CX76 440 aa4.79□□□□□ -1.64
RRP42YDL111C ADP1P25371 1049 aa4.79□□□□□ -1.64
RRP42YDL111C MCM5P29496 775 aaKnown RBP4.79□□□□□ -1.64
RRP42YDL111C RPT1P33299 467 aaKnown RBP4.79□□□□□ -1.64
RRP42YDL111C TSA1P34760 196 aaKnown RBP4.79□□□□□ -1.64
RRP42YDL111C FYV10P40492 516 aa4.79□□□□□ -1.64
RRP42YDL111C DAK2P43550 591 aa4.79□□□□□ -1.64
RRP42YDL111C SAM37P50110 327 aa4.79□□□□□ -1.64
RRP42YDL111C CDA2Q06703 312 aa4.79□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 62.9 ms