RNA–Protein interactions for RNA: YDL076C

RXT3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene RXT3, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RXT3YDL076C ATG1P53104 897 aa5.73□□□□□ -1.49
RXT3YDL076C APC1P53886 1748 aa5.72□□□□□ -1.49
RXT3YDL076C GLO3P38682 493 aaKnown RBP5.72□□□□□ -1.49
RXT3YDL076C BOL3P39724 118 aa5.72□□□□□ -1.49
RXT3YDL076C HDA3Q06623 655 aa5.72□□□□□ -1.49
RXT3YDL076C CTT1P06115 562 aa5.71□□□□□ -1.5
RXT3YDL076C TRL1P09880 827 aaKnown RBP5.71□□□□□ -1.5
RXT3YDL076C NTH2P35172 780 aa5.71□□□□□ -1.5
RXT3YDL076C SBE2P42223 864 aaKnown RBP5.71□□□□□ -1.5
RXT3YDL076C MSN5P52918 1224 aa5.71□□□□□ -1.5
RXT3YDL076C CWH41P53008 833 aa5.71□□□□□ -1.5
RXT3YDL076C ADE16P54113 591 aaKnown RBP5.71□□□□□ -1.5
RXT3YDL076C YMR187CQ03236 431 aa5.71□□□□□ -1.5
RXT3YDL076C TDA6Q06466 467 aa5.71□□□□□ -1.5
RXT3YDL076C BDS1Q08347 646 aa5.71□□□□□ -1.5
RXT3YDL076C SNF2P22082 1703 aa5.71□□□□□ -1.5
RXT3YDL076C YKL222CP35995 705 aa5.7□□□□□ -1.5
RXT3YDL076C PPX1P38698 397 aa5.7□□□□□ -1.5
RXT3YDL076C SKN7P38889 622 aa5.7□□□□□ -1.5
RXT3YDL076C MDJ2P42834 146 aa5.7□□□□□ -1.5
RXT3YDL076C YBP2P53169 641 aa5.7□□□□□ -1.5
RXT3YDL076C TAP42Q04372 366 aa5.7□□□□□ -1.5
RXT3YDL076C SEC3P33332 1336 aaKnown RBP5.7□□□□□ -1.5
RXT3YDL076C CYT1P07143 309 aa5.69□□□□□ -1.5
RXT3YDL076C PAM1P37304 830 aaKnown RBP5.69□□□□□ -1.5
RXT3YDL076C YER156CP40093 338 aaKnown RBP5.69□□□□□ -1.5
RXT3YDL076C QDR1P40475 563 aa5.69□□□□□ -1.5
RXT3YDL076C RPO41P13433 1351 aaKnown RBP5.68□□□□□ -1.5
RXT3YDL076C RPS6AP0CX37 236 aaKnown RBP5.68□□□□□ -1.5
RXT3YDL076C RPS6BP0CX38 236 aaPredicted RBP5.68□□□□□ -1.5
RXT3YDL076C KAR2P16474 682 aaKnown RBP5.68□□□□□ -1.5
RXT3YDL076C UTR2P32623 467 aa5.68□□□□□ -1.5
RXT3YDL076C POL32P47110 350 aa5.68□□□□□ -1.5
RXT3YDL076C ADE12P80210 433 aaKnown RBP5.68□□□□□ -1.5
RXT3YDL076C CTF4Q01454 927 aa5.68□□□□□ -1.5
RXT3YDL076C MLP1Q02455 1875 aaKnown RBP5.68□□□□□ -1.5
RXT3YDL076C RPS9BP05755 195 aaKnown RBP5.67□□□□□ -1.5
RXT3YDL076C OSM1P21375 501 aaKnown RBP5.67□□□□□ -1.5
RXT3YDL076C TBS1P38114 1094 aa5.67□□□□□ -1.5
RXT3YDL076C EAF6P47128 113 aa5.67□□□□□ -1.5
RXT3YDL076C ACF4P47129 309 aa5.67□□□□□ -1.5
RXT3YDL076C MDG1P53885 366 aa5.67□□□□□ -1.5
RXT3YDL076C DAT1P13483 248 aaKnown RBP5.66□□□□□ -1.5
RXT3YDL076C TOS1P38288 455 aa5.66□□□□□ -1.5
RXT3YDL076C RPP2BP02400 110 aaKnown RBP5.65□□□□□ -1.5
RXT3YDL076C SPT2P06843 333 aaPredicted RBP5.65□□□□□ -1.5
RXT3YDL076C SWI5P08153 709 aa5.65□□□□□ -1.5
RXT3YDL076C FBP26P32604 452 aa5.65□□□□□ -1.5
RXT3YDL076C SQS1P53866 767 aaKnown RBP5.65□□□□□ -1.5
RXT3YDL076C ISU1Q03020 165 aa5.65□□□□□ -1.5
RXT3YDL076C NUT2Q06213 157 aa5.65□□□□□ -1.5
RXT3YDL076C WHI5Q12416 295 aa5.65□□□□□ -1.5
RXT3YDL076C HSP104P31539 908 aaKnown RBP5.64□□□□□ -1.51
RXT3YDL076C SUV3P32580 737 aa5.64□□□□□ -1.51
RXT3YDL076C NGR1P32831 672 aaKnown RBP5.64□□□□□ -1.51
RXT3YDL076C SPR3P41901 512 aa5.64□□□□□ -1.51
RXT3YDL076C VTC4P47075 721 aa5.64□□□□□ -1.51
RXT3YDL076C PAP2P53632 584 aaKnown RBP5.64□□□□□ -1.51
RXT3YDL076C INP54Q08227 384 aaKnown RBP5.64□□□□□ -1.51
RXT3YDL076C LSO1Q3E827 93 aa5.64□□□□□ -1.51
RXT3YDL076C RIM15P43565 1770 aa5.64□□□□□ -1.51
RXT3YDL076C MGE1P38523 228 aa5.63□□□□□ -1.51
RXT3YDL076C YNR014WP53719 212 aa5.63□□□□□ -1.51
RXT3YDL076C RMT2Q03305 412 aa5.63□□□□□ -1.51
RXT3YDL076C RRP15Q06511 250 aaPredicted RBP5.63□□□□□ -1.51
RXT3YDL076C FRT1Q99332 602 aa5.63□□□□□ -1.51
RXT3YDL076C YML133CQ03099 1374 aa5.63□□□□□ -1.51
RXT3YDL076C YLL067CQ07888 1374 aa5.63□□□□□ -1.51
RXT3YDL076C YLL066CQ99208 1374 aa5.63□□□□□ -1.51
RXT3YDL076C YIL177CP40434 1758 aa5.62□□□□□ -1.51
RXT3YDL076C YJL225CP40889 1758 aa5.62□□□□□ -1.51
RXT3YDL076C ATE1P16639 503 aa5.62□□□□□ -1.51
RXT3YDL076C ISC10P32645 267 aa5.62□□□□□ -1.51
RXT3YDL076C YMR265CQ03508 461 aaKnown RBP5.62□□□□□ -1.51
RXT3YDL076C AOS1Q06624 347 aa5.62□□□□□ -1.51
RXT3YDL076C IRC3Q06683 689 aa5.62□□□□□ -1.51
RXT3YDL076C SYT1Q06836 1226 aa5.62□□□□□ -1.51
RXT3YDL076C MHP1P43638 1398 aa5.62□□□□□ -1.51
RXT3YDL076C LPD1P09624 499 aaKnown RBP5.61□□□□□ -1.51
RXT3YDL076C ERT1P38140 529 aa5.61□□□□□ -1.51
RXT3YDL076C YBR197CP38306 217 aa5.61□□□□□ -1.51
RXT3YDL076C DSD1P53095 428 aa5.61□□□□□ -1.51
RXT3YDL076C HIM1Q06674 414 aa5.61□□□□□ -1.51
RXT3YDL076C DIB1Q06819 143 aaPredicted RBP5.61□□□□□ -1.51
RXT3YDL076C WTM2Q12206 467 aa5.61□□□□□ -1.51
RXT3YDL076C DIT1P21623 536 aa5.6□□□□□ -1.51
RXT3YDL076C SER1P33330 395 aaKnown RBP5.6□□□□□ -1.51
RXT3YDL076C BOI1P38041 980 aaKnown RBP5.6□□□□□ -1.51
RXT3YDL076C PFF1P38244 976 aa5.6□□□□□ -1.51
RXT3YDL076C BUD27P43573 796 aaKnown RBP RIP-Chip data5.6□□□□□ -1.51not detected
RXT3YDL076C KRE33P53914 1056 aaKnown RBP5.6□□□□□ -1.51
RXT3YDL076C RAT1Q02792 1006 aaKnown RBP5.6□□□□□ -1.51
RXT3YDL076C PDS5Q04264 1277 aa5.6□□□□□ -1.51
RXT3YDL076C NYV1Q12255 253 aa5.6□□□□□ -1.51
RXT3YDL076C STE6P12866 1290 aa5.59□□□□□ -1.51
RXT3YDL076C KCC4P25389 1037 aa5.59□□□□□ -1.51
RXT3YDL076C DLD3P39976 496 aaKnown RBP5.59□□□□□ -1.51
RXT3YDL076C POL5P39985 1022 aaKnown RBP5.59□□□□□ -1.51
RXT3YDL076C YFR016CP43597 1233 aaKnown RBP5.59□□□□□ -1.51
RXT3YDL076C OYE2Q03558 400 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms