RNA–Protein interactions for RNA: YDL020C

RPN4, Transcript of Transcription factor that stimulates expression of proteasome genes, yeastyeast

Gene RPN4, Length 1,596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN4YDL020C SEC23P15303 768 aaKnown RBP5.74□□□□□ -1.49
RPN4YDL020C DUT1P33317 147 aa5.74□□□□□ -1.49
RPN4YDL020C YKL077WP36081 392 aa5.74□□□□□ -1.49
RPN4YDL020C EXO5P38289 585 aa5.74□□□□□ -1.49
RPN4YDL020C LEM3P42838 414 aa5.74□□□□□ -1.49
RPN4YDL020C JJJ3P47138 172 aa5.74□□□□□ -1.49
RPN4YDL020C GDE1Q02979 1223 aa5.74□□□□□ -1.49
RPN4YDL020C NAR1P23503 491 aaKnown RBP5.73□□□□□ -1.49
RPN4YDL020C TRK2P28584 889 aa5.73□□□□□ -1.49
RPN4YDL020C GIP2P40036 548 aa5.73□□□□□ -1.49
RPN4YDL020C FAA4P47912 694 aaKnown RBP5.73□□□□□ -1.49
RPN4YDL020C GIS4Q04233 774 aa5.73□□□□□ -1.49
RPN4YDL020C WRS1Q12109 432 aaKnown RBP5.73□□□□□ -1.49
RPN4YDL020C AIM44Q99299 758 aa5.73□□□□□ -1.49
RPN4YDL020C HEM13P11353 328 aaKnown RBP5.72□□□□□ -1.49
RPN4YDL020C HPF1Q05164 967 aa5.72□□□□□ -1.49
RPN4YDL020C HDA2Q06629 674 aa5.72□□□□□ -1.49
RPN4YDL020C SSF2Q12153 453 aaPredicted RBP5.72□□□□□ -1.49
RPN4YDL020C YTA7P40340 1379 aa5.72□□□□□ -1.49
RPN4YDL020C TY1A-LR4P0C2I8 440 aaKnown RBP5.72□□□□□ -1.49
RPN4YDL020C TY1A-DR6P0CX70 440 aa5.72□□□□□ -1.49
RPN4YDL020C TY1A-ER1P0CX71 440 aa5.72□□□□□ -1.49
RPN4YDL020C TY1A-LR2P0CX72 440 aa5.72□□□□□ -1.49
RPN4YDL020C TY1A-PLP0CX73 440 aa5.72□□□□□ -1.49
RPN4YDL020C TY1A-JR1P0CX74 440 aa5.72□□□□□ -1.49
RPN4YDL020C TY1A-LR3P0CX75 440 aa5.72□□□□□ -1.49
RPN4YDL020C TY1A-ML2P0CX76 440 aa5.72□□□□□ -1.49
RPN4YDL020C TAF13P11747 167 aa5.72□□□□□ -1.49
RPN4YDL020C ALG14P38242 237 aa5.72□□□□□ -1.49
RPN4YDL020C GNP1P48813 663 aa5.72□□□□□ -1.49
RPN4YDL020C UTP22P53254 1237 aaPredicted RBP5.72□□□□□ -1.49
RPN4YDL020C YIG1Q08956 461 aa5.72□□□□□ -1.49
RPN4YDL020C TY1A-GR1Q12085 440 aa5.72□□□□□ -1.49
RPN4YDL020C SLP1Q12232 587 aa5.72□□□□□ -1.49
RPN4YDL020C DPH6Q12429 685 aa5.72□□□□□ -1.49
RPN4YDL020C TY1A-PR3Q6Q5H1 440 aaKnown RBP5.72□□□□□ -1.49
RPN4YDL020C TY1A-OLQ92392 440 aaKnown RBP5.72□□□□□ -1.49
RPN4YDL020C VMA4P22203 233 aaKnown RBP5.71□□□□□ -1.5
RPN4YDL020C RAD27P26793 382 aa5.71□□□□□ -1.5
RPN4YDL020C PGM2P37012 569 aaKnown RBP5.71□□□□□ -1.5
RPN4YDL020C RDH54P38086 958 aa5.71□□□□□ -1.5
RPN4YDL020C PAN5P38787 379 aa5.71□□□□□ -1.5
RPN4YDL020C TED1P40533 473 aa5.71□□□□□ -1.5
RPN4YDL020C YGR053CP53234 283 aa5.71□□□□□ -1.5
RPN4YDL020C SPO71Q03868 1245 aa5.71□□□□□ -1.5
RPN4YDL020C TMA46Q12000 345 aaKnown RBP5.71□□□□□ -1.5
RPN4YDL020C YGR035CP53222 116 aa5.69□□□□□ -1.5
RPN4YDL020C SIW14P53965 281 aa5.69□□□□□ -1.5
RPN4YDL020C EEB1Q02891 456 aa5.69□□□□□ -1.5
RPN4YDL020C REC8Q12188 680 aa5.69□□□□□ -1.5
RPN4YDL020C NEM1P38757 446 aa5.68□□□□□ -1.5
RPN4YDL020C HXT13P39924 564 aa5.68□□□□□ -1.5
RPN4YDL020C POL5P39985 1022 aaKnown RBP5.68□□□□□ -1.5
RPN4YDL020C SLS1P42900 643 aa5.68□□□□□ -1.5
RPN4YDL020C MTR4P47047 1073 aaKnown RBP5.68□□□□□ -1.5
RPN4YDL020C HXT17P53631 564 aa5.68□□□□□ -1.5
RPN4YDL020C HXT15P54854 567 aa5.68□□□□□ -1.5
RPN4YDL020C YOL098CQ12496 1037 aa5.68□□□□□ -1.5
RPN4YDL020C NHA1Q99271 985 aa5.68□□□□□ -1.5
RPN4YDL020C TY4B-PA0A0B7P3V8 1104 aa5.67□□□□□ -1.5
RPN4YDL020C SCP160P06105 1222 aaKnown RBP RIP-Chip data5.67□□□□□ -1.5not detected
RPN4YDL020C PRI2P20457 528 aa5.67□□□□□ -1.5
RPN4YDL020C GCV1P48015 400 aa5.67□□□□□ -1.5
RPN4YDL020C MEC3Q02574 474 aa5.67□□□□□ -1.5
RPN4YDL020C UTP5Q04177 643 aaKnown RBP5.67□□□□□ -1.5
RPN4YDL020C OPI10Q08202 246 aa5.67□□□□□ -1.5
RPN4YDL020C TY4A-HQ6Q5P6 413 aa5.67□□□□□ -1.5
RPN4YDL020C SAC7P17121 654 aa5.67□□□□□ -1.5
RPN4YDL020C ARL1P38116 183 aaKnown RBP5.67□□□□□ -1.5
RPN4YDL020C YJL049WP47048 450 aa5.67□□□□□ -1.5
RPN4YDL020C ENT3P47160 408 aa5.67□□□□□ -1.5
RPN4YDL020C ROD1Q02805 837 aa5.67□□□□□ -1.5
RPN4YDL020C FAL1Q12099 399 aaKnown RBP5.67□□□□□ -1.5
RPN4YDL020C DED1P06634 604 aaKnown RBP5.66□□□□□ -1.5
RPN4YDL020C EST2Q06163 884 aa5.66□□□□□ -1.5
RPN4YDL020C ELG1Q12050 791 aa5.66□□□□□ -1.5
RPN4YDL020C GRX1P25373 110 aaKnown RBP5.65□□□□□ -1.5
RPN4YDL020C RER2P35196 286 aa5.65□□□□□ -1.5
RPN4YDL020C ADD66P36040 267 aa5.65□□□□□ -1.5
RPN4YDL020C REI1P38344 393 aaPredicted RBP5.65□□□□□ -1.5
RPN4YDL020C FAR11P53917 953 aa5.65□□□□□ -1.5
RPN4YDL020C NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.65□□□□□ -1.5not detected
RPN4YDL020C TRP2P00899 507 aaKnown RBP5.64□□□□□ -1.51
RPN4YDL020C ERS1P17261 260 aa5.64□□□□□ -1.51
RPN4YDL020C BAS1P22035 811 aa5.64□□□□□ -1.51
RPN4YDL020C YKL069WP36088 180 aa5.64□□□□□ -1.51
RPN4YDL020C ATG14P38270 344 aa5.64□□□□□ -1.51
RPN4YDL020C TYW3P53177 273 aa5.64□□□□□ -1.51
RPN4YDL020C YMR074CQ04773 145 aa5.64□□□□□ -1.51
RPN4YDL020C TDA5Q06417 326 aaKnown RBP5.64□□□□□ -1.51
RPN4YDL020C YLL054CQ12244 843 aa5.64□□□□□ -1.51
RPN4YDL020C LYP1P32487 611 aa5.63□□□□□ -1.51
RPN4YDL020C MKK2P32491 506 aa5.63□□□□□ -1.51
RPN4YDL020C MAE1P36013 669 aaKnown RBP5.63□□□□□ -1.51
RPN4YDL020C SPF1P39986 1215 aaKnown RBP5.63□□□□□ -1.51
RPN4YDL020C IOC3P43596 787 aa5.63□□□□□ -1.51
RPN4YDL020C SRP40P32583 406 aaPredicted RBP5.63□□□□□ -1.51
RPN4YDL020C SPO74P45819 413 aa5.63□□□□□ -1.51
RPN4YDL020C YNR063WP53749 607 aa5.63□□□□□ -1.51
RPN4YDL020C DSE4P53753 1117 aa5.63□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 38.7 ms