RNA–Protein interactions for RNA: YCR094W

CDC50, Transcript of Endosomal protein that interacts with phospholipid flippase Drs2p, yeastyeast

Gene CDC50, Length 1,176 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC50YCR094W LPX1Q12405 387 aaKnown RBP4.89□□□□□ -1.63
CDC50YCR094W NPR1P22211 790 aa4.88□□□□□ -1.63
CDC50YCR094W DMA2P53924 522 aa4.88□□□□□ -1.63
CDC50YCR094W MEC3Q02574 474 aa4.88□□□□□ -1.63
CDC50YCR094W YVC1Q12324 675 aa4.88□□□□□ -1.63
CDC50YCR094W CMR1Q12510 522 aaKnown RBP4.88□□□□□ -1.63
CDC50YCR094W DUR3P33413 735 aa4.87□□□□□ -1.63
CDC50YCR094W BOL3P39724 118 aa4.87□□□□□ -1.63
CDC50YCR094W MSH6Q03834 1242 aa4.87□□□□□ -1.63
CDC50YCR094W HDA2Q06629 674 aa4.87□□□□□ -1.63
CDC50YCR094W ALG6Q12001 544 aaKnown RBP4.87□□□□□ -1.63
CDC50YCR094W FUR4P05316 633 aaKnown RBP4.86□□□□□ -1.63
CDC50YCR094W PRP5P21372 849 aaPredicted RBP4.86□□□□□ -1.63
CDC50YCR094W SSA4P22202 642 aaKnown RBP4.85□□□□□ -1.63
CDC50YCR094W PRO1P32264 428 aa4.85□□□□□ -1.63
CDC50YCR094W AIM3P38266 947 aaKnown RBP4.85□□□□□ -1.63
CDC50YCR094W REI1P38344 393 aaPredicted RBP4.85□□□□□ -1.63
CDC50YCR094W UTP22P53254 1237 aaPredicted RBP4.84□□□□□ -1.63
CDC50YCR094W GIS1Q03833 894 aa4.84□□□□□ -1.63
CDC50YCR094W NFS1P25374 497 aa4.83□□□□□ -1.64
CDC50YCR094W YDL177CQ12257 170 aa4.83□□□□□ -1.64
CDC50YCR094W ECM2P38241 364 aaKnown RBP4.82□□□□□ -1.64
CDC50YCR094W PTC7P38797 343 aa4.82□□□□□ -1.64
CDC50YCR094W YGR045CP53229 120 aa4.82□□□□□ -1.64
CDC50YCR094W MRPL22P53881 309 aa4.82□□□□□ -1.64
CDC50YCR094W RSC4Q02206 625 aa4.82□□□□□ -1.64
CDC50YCR094W SMY2P32909 740 aaKnown RBP4.81□□□□□ -1.64
CDC50YCR094W LEO1P38439 464 aa4.81□□□□□ -1.64
CDC50YCR094W RIM8P53179 542 aa4.81□□□□□ -1.64
CDC50YCR094W ELA1P53861 379 aaPredicted RBP4.81□□□□□ -1.64
CDC50YCR094W GTS1P40956 396 aa4.8□□□□□ -1.64
CDC50YCR094W TY1A-LR4P0C2I8 440 aaKnown RBP4.78□□□□□ -1.64
CDC50YCR094W TY1A-DR6P0CX70 440 aa4.78□□□□□ -1.64
CDC50YCR094W TY1A-ER1P0CX71 440 aa4.78□□□□□ -1.64
CDC50YCR094W TY1A-LR2P0CX72 440 aa4.78□□□□□ -1.64
CDC50YCR094W TY1A-PLP0CX73 440 aa4.78□□□□□ -1.64
CDC50YCR094W TY1A-JR1P0CX74 440 aa4.78□□□□□ -1.64
CDC50YCR094W TY1A-LR3P0CX75 440 aa4.78□□□□□ -1.64
CDC50YCR094W TY1A-ML2P0CX76 440 aa4.78□□□□□ -1.64
CDC50YCR094W NNK1P36003 928 aa4.78□□□□□ -1.64
CDC50YCR094W SAP155P43612 1002 aa4.78□□□□□ -1.64
CDC50YCR094W TY1A-GR1Q12085 440 aa4.78□□□□□ -1.64
CDC50YCR094W TY1A-PR3Q6Q5H1 440 aaKnown RBP4.78□□□□□ -1.64
CDC50YCR094W TY1A-OLQ92392 440 aaKnown RBP4.78□□□□□ -1.64
CDC50YCR094W ETP1P38748 585 aaKnown RBP4.77□□□□□ -1.65
CDC50YCR094W UFD2P54860 961 aa4.77□□□□□ -1.65
CDC50YCR094W AVO1Q08236 1176 aa4.77□□□□□ -1.65
CDC50YCR094W TOD6P34219 525 aa4.76□□□□□ -1.65
CDC50YCR094W PUS7Q08647 676 aaKnown RBP4.76□□□□□ -1.65
CDC50YCR094W SOD2P00447 233 aa4.75□□□□□ -1.65
CDC50YCR094W ARL1P38116 183 aaKnown RBP4.75□□□□□ -1.65
CDC50YCR094W GLO3P38682 493 aaKnown RBP4.75□□□□□ -1.65
CDC50YCR094W YPL277CQ08989 487 aa4.75□□□□□ -1.65
CDC50YCR094W FLP1P03870 423 aa4.74□□□□□ -1.65
CDC50YCR094W QDR1P40475 563 aa4.74□□□□□ -1.65
CDC50YCR094W YAF9P53930 226 aa4.74□□□□□ -1.65
CDC50YCR094W TPP1Q03796 238 aa4.74□□□□□ -1.65
CDC50YCR094W NUT1P53114 1132 aa4.73□□□□□ -1.65
CDC50YCR094W GSF2Q04697 403 aaKnown RBP4.73□□□□□ -1.65
CDC50YCR094W PMT7Q06644 662 aa4.73□□□□□ -1.65
CDC50YCR094W RPS13P05756 151 aaKnown RBP4.72□□□□□ -1.65
CDC50YCR094W YNL011CP53980 444 aa4.72□□□□□ -1.65
CDC50YCR094W MNL2Q12205 849 aa4.72□□□□□ -1.65
CDC50YCR094W SAM35P14693 329 aa4.71□□□□□ -1.66
CDC50YCR094W MCM5P29496 775 aaKnown RBP4.71□□□□□ -1.66
CDC50YCR094W ABZ1P37254 787 aaPredicted RBP4.71□□□□□ -1.66
CDC50YCR094W SLS1P42900 643 aa4.71□□□□□ -1.66
CDC50YCR094W CLU1Q03690 1277 aaKnown RBP4.71□□□□□ -1.66
CDC50YCR094W BSC2Q05611 235 aa4.71□□□□□ -1.66
CDC50YCR094W NMD3P38861 518 aaKnown RBP4.7□□□□□ -1.66
CDC50YCR094W KAR5Q04746 504 aa4.7□□□□□ -1.66
CDC50YCR094W YKL077WP36081 392 aa4.69□□□□□ -1.66
CDC50YCR094W EXO5P38289 585 aa4.69□□□□□ -1.66
CDC50YCR094W YHL012WP38709 493 aa4.69□□□□□ -1.66
CDC50YCR094W NEM1P38757 446 aa4.69□□□□□ -1.66
CDC50YCR094W SNO2P53823 222 aa4.69□□□□□ -1.66
CDC50YCR094W TRS120Q04183 1289 aa4.69□□□□□ -1.66
CDC50YCR094W SHM2P37291 469 aaKnown RBP4.68□□□□□ -1.66
CDC50YCR094W FOL2P51601 243 aaKnown RBP4.68□□□□□ -1.66
CDC50YCR094W ATG1P53104 897 aa4.68□□□□□ -1.66
CDC50YCR094W CDC55Q00362 526 aa4.68□□□□□ -1.66
CDC50YCR094W YLR257WQ06146 321 aaKnown RBP4.68□□□□□ -1.66
CDC50YCR094W YLR358CO13565 187 aa4.67□□□□□ -1.66
CDC50YCR094W RET1P22276 1149 aaKnown RBP4.67□□□□□ -1.66
CDC50YCR094W CTS1P29029 562 aa4.67□□□□□ -1.66
CDC50YCR094W MDL2P33311 773 aa4.67□□□□□ -1.66
CDC50YCR094W YAR028WP39548 234 aa4.67□□□□□ -1.66
CDC50YCR094W MON1P53129 644 aa4.67□□□□□ -1.66
CDC50YCR094W INP54Q08227 384 aaKnown RBP4.67□□□□□ -1.66
CDC50YCR094W TAD3Q9URQ3 322 aa4.67□□□□□ -1.66
CDC50YCR094W PRE10P21242 288 aaKnown RBP RIP-Chip data4.66□□□□□ -1.66not detected
CDC50YCR094W RVS167P39743 482 aaKnown RBP4.66□□□□□ -1.66
CDC50YCR094W ACF4P47129 309 aa4.66□□□□□ -1.66
CDC50YCR094W TUB2P02557 457 aaKnown RBP4.65□□□□□ -1.67
CDC50YCR094W SUB2Q07478 446 aaKnown RBP4.65□□□□□ -1.67
CDC50YCR094W AIM26P32858 118 aa4.64□□□□□ -1.67
CDC50YCR094W SHU2P38957 223 aa4.63□□□□□ -1.67
CDC50YCR094W YDR132CQ03900 495 aa4.63□□□□□ -1.67
CDC50YCR094W RSA3Q05942 220 aaKnown RBP4.63□□□□□ -1.67
CDC50YCR094W PNS1Q12412 539 aa4.63□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 49.7 ms