RNA–Protein interactions for RNA: YCL051W

LRE1, Transcript of Protein involved in control of cell wall structure and stress response, yeast

Gene LRE1, Length 1,752 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LRE1	YCL051W	TTI1	P36097	1038 aa		3.14	□□□□□ -1.91
LRE1	YCL051W	IRS4	P36115	615 aa	Known RBP	3.14	□□□□□ -1.91
LRE1	YCL051W	SUT1	P53032	299 aa	Known RBP	3.14	□□□□□ -1.91
LRE1	YCL051W	CLU1	Q03690	1277 aa	Known RBP	3.14	□□□□□ -1.91
LRE1	YCL051W	YPL277C	Q08989	487 aa		3.14	□□□□□ -1.91
LRE1	YCL051W	TUB2	P02557	457 aa	Known RBP	3.13	□□□□□ -1.91
LRE1	YCL051W	SRS2	P12954	1174 aa		3.13	□□□□□ -1.91
LRE1	YCL051W	PTC7	P38797	343 aa		3.13	□□□□□ -1.91
LRE1	YCL051W	PNS1	Q12412	539 aa		3.13	□□□□□ -1.91
LRE1	YCL051W	SHM2	P37291	469 aa	Known RBP	3.12	□□□□□ -1.91
LRE1	YCL051W	ETP1	P38748	585 aa	Known RBP	3.12	□□□□□ -1.91
LRE1	YCL051W	HGH1	P48362	394 aa	Known RBP	3.12	□□□□□ -1.91
LRE1	YCL051W	RPS13	P05756	151 aa	Known RBP	3.12	□□□□□ -1.91
LRE1	YCL051W	HTS1	P07263	546 aa	Known RBP	3.12	□□□□□ -1.91
LRE1	YCL051W	CTS1	P29029	562 aa		3.12	□□□□□ -1.91
LRE1	YCL051W	CTR9	P89105	1077 aa		3.12	□□□□□ -1.91
LRE1	YCL051W	MEC3	Q02574	474 aa		3.12	□□□□□ -1.91
LRE1	YCL051W	ALG6	Q12001	544 aa	Known RBP	3.11	□□□□□ -1.91
LRE1	YCL051W	RPB10	P22139	70 aa		3.1	□□□□□ -1.91
LRE1	YCL051W	GTS1	P40956	396 aa		3.1	□□□□□ -1.91
LRE1	YCL051W	YLR358C	O13565	187 aa		3.1	□□□□□ -1.91
LRE1	YCL051W	SMC1	P32908	1225 aa		3.1	□□□□□ -1.91
LRE1	YCL051W	COB	P00163	385 aa		3.09	□□□□□ -1.91
LRE1	YCL051W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	3.09	□□□□□ -1.91	not detected
LRE1	YCL051W	NPR1	P22211	790 aa		3.09	□□□□□ -1.91
LRE1	YCL051W	PUP1	P25043	261 aa		3.09	□□□□□ -1.91
LRE1	YCL051W	SMY2	P32909	740 aa	Known RBP	3.09	□□□□□ -1.91
LRE1	YCL051W	REI1	P38344	393 aa	Predicted RBP	3.09	□□□□□ -1.91
LRE1	YCL051W	RIM11	P38615	370 aa		3.09	□□□□□ -1.91
LRE1	YCL051W	CWC15	Q03772	175 aa	Known RBP	3.09	□□□□□ -1.91
LRE1	YCL051W	CMR1	Q12510	522 aa	Known RBP	3.08	□□□□□ -1.92
LRE1	YCL051W	PRP5	P21372	849 aa	Predicted RBP	3.07	□□□□□ -1.92
LRE1	YCL051W	YGR045C	P53229	120 aa		3.07	□□□□□ -1.92
LRE1	YCL051W	UTP22	P53254	1237 aa	Predicted RBP	3.07	□□□□□ -1.92
LRE1	YCL051W	SNO2	P53823	222 aa		3.07	□□□□□ -1.92
LRE1	YCL051W	RRN6	P32786	894 aa		3.07	□□□□□ -1.92
LRE1	YCL051W	ELA1	P53861	379 aa	Predicted RBP	3.07	□□□□□ -1.92
LRE1	YCL051W	DUR3	P33413	735 aa		3.06	□□□□□ -1.92
LRE1	YCL051W	NNK1	P36003	928 aa		3.06	□□□□□ -1.92
LRE1	YCL051W	LSO1	Q3E827	93 aa		3.06	□□□□□ -1.92
LRE1	YCL051W	SLI1	P53304	468 aa		3.05	□□□□□ -1.92
LRE1	YCL051W	YML122C	Q03207	126 aa		3.05	□□□□□ -1.92
LRE1	YCL051W	PNP1	Q05788	311 aa		3.05	□□□□□ -1.92
LRE1	YCL051W	PUS9	Q12069	462 aa		3.05	□□□□□ -1.92
LRE1	YCL051W	TAT2	P38967	592 aa		3.05	□□□□□ -1.92
LRE1	YCL051W	PUS7	Q08647	676 aa	Known RBP	3.05	□□□□□ -1.92
LRE1	YCL051W	CPS1	P27614	576 aa		3.04	□□□□□ -1.92
LRE1	YCL051W	YDR132C	Q03900	495 aa		3.04	□□□□□ -1.92
LRE1	YCL051W	DNA2	P38859	1522 aa		3.03	□□□□□ -1.92
LRE1	YCL051W	SAM35	P14693	329 aa		3.03	□□□□□ -1.92
LRE1	YCL051W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	3.03	□□□□□ -1.92	not detected
LRE1	YCL051W	FOL2	P51601	243 aa	Known RBP	3.02	□□□□□ -1.93
LRE1	YCL051W	TPP1	Q03796	238 aa		3.02	□□□□□ -1.93
LRE1	YCL051W	AVO1	Q08236	1176 aa		3.02	□□□□□ -1.93
LRE1	YCL051W	TRM2	P33753	639 aa		3.02	□□□□□ -1.93
LRE1	YCL051W	ARL1	P38116	183 aa	Known RBP	3.02	□□□□□ -1.93
LRE1	YCL051W	SWR1	Q05471	1514 aa		3.01	□□□□□ -1.93
LRE1	YCL051W	TY1A-LR4	P0C2I8	440 aa	Known RBP	3.01	□□□□□ -1.93
LRE1	YCL051W	TY1A-DR6	P0CX70	440 aa		3.01	□□□□□ -1.93
LRE1	YCL051W	TY1A-ER1	P0CX71	440 aa		3.01	□□□□□ -1.93
LRE1	YCL051W	TY1A-LR2	P0CX72	440 aa		3.01	□□□□□ -1.93
LRE1	YCL051W	TY1A-PL	P0CX73	440 aa		3.01	□□□□□ -1.93
LRE1	YCL051W	TY1A-JR1	P0CX74	440 aa		3.01	□□□□□ -1.93
LRE1	YCL051W	TY1A-LR3	P0CX75	440 aa		3.01	□□□□□ -1.93
LRE1	YCL051W	TY1A-ML2	P0CX76	440 aa		3.01	□□□□□ -1.93
LRE1	YCL051W	TY1A-GR1	Q12085	440 aa		3.01	□□□□□ -1.93
LRE1	YCL051W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	3.01	□□□□□ -1.93
LRE1	YCL051W	TY1A-OL	Q92392	440 aa	Known RBP	3.01	□□□□□ -1.93
LRE1	YCL051W	YHL012W	P38709	493 aa		3	□□□□□ -1.93
LRE1	YCL051W	MSE1	P48525	536 aa		3	□□□□□ -1.93
LRE1	YCL051W	KOG1	P38873	1557 aa		3	□□□□□ -1.93
LRE1	YCL051W	MDL2	P33311	773 aa		3	□□□□□ -1.93
LRE1	YCL051W	SAP155	P43612	1002 aa		3	□□□□□ -1.93
LRE1	YCL051W	SPT20	P50875	604 aa		3	□□□□□ -1.93
LRE1	YCL051W	RSC4	Q02206	625 aa		3	□□□□□ -1.93
LRE1	YCL051W	ECM2	P38241	364 aa	Known RBP	2.99	□□□□□ -1.93
LRE1	YCL051W	YML083C	Q04526	418 aa		2.99	□□□□□ -1.93
LRE1	YCL051W	NMD3	P38861	518 aa	Known RBP	2.98	□□□□□ -1.93
LRE1	YCL051W	MEF2	P39677	819 aa		2.98	□□□□□ -1.93
LRE1	YCL051W	GCN5	Q03330	439 aa		2.98	□□□□□ -1.93
LRE1	YCL051W	AIM26	P32858	118 aa		2.97	□□□□□ -1.93
LRE1	YCL051W	SUN4	P53616	420 aa		2.97	□□□□□ -1.93
LRE1	YCL051W	LAM1	P38851	1228 aa		2.97	□□□□□ -1.93
LRE1	YCL051W	BOL3	P39724	118 aa		2.97	□□□□□ -1.93
LRE1	YCL051W	SGD1	Q06132	899 aa		2.97	□□□□□ -1.93
LRE1	YCL051W	YLR257W	Q06146	321 aa	Known RBP	2.97	□□□□□ -1.93
LRE1	YCL051W	TY1B-DR4	Q07793	1604 aa		2.96	□□□□□ -1.93
LRE1	YCL051W	FUR4	P05316	633 aa	Known RBP	2.96	□□□□□ -1.94
LRE1	YCL051W	RAD53	P22216	821 aa		2.96	□□□□□ -1.94
LRE1	YCL051W	RET1	P22276	1149 aa	Known RBP	2.96	□□□□□ -1.94
LRE1	YCL051W	SLS1	P42900	643 aa		2.96	□□□□□ -1.94
LRE1	YCL051W	YAF9	P53930	226 aa		2.96	□□□□□ -1.94
LRE1	YCL051W	CTF4	Q01454	927 aa		2.96	□□□□□ -1.94
LRE1	YCL051W	SRO9	P25567	434 aa	Known RBP	2.95	□□□□□ -1.94
LRE1	YCL051W	EXO5	P38289	585 aa		2.95	□□□□□ -1.94
LRE1	YCL051W	NEM1	P38757	446 aa		2.95	□□□□□ -1.94
LRE1	YCL051W	YAR028W	P39548	234 aa		2.95	□□□□□ -1.94
LRE1	YCL051W	ENV11	P53246	860 aa		2.95	□□□□□ -1.94
LRE1	YCL051W	PMT7	Q06644	662 aa		2.95	□□□□□ -1.94
LRE1	YCL051W	FLP1	P03870	423 aa		2.94	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms