RNA–Protein interactions for RNA: YBR194W

AIM4, Transcript of Protein proposed to be associated with the nuclear pore complex, yeast

Gene AIM4, Length 372 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AIM4	YBR194W	TY1A-LR2	P0CX72	440 aa		4.69	□□□□□ -1.66
AIM4	YBR194W	TY1A-PL	P0CX73	440 aa		4.69	□□□□□ -1.66
AIM4	YBR194W	TY1A-JR1	P0CX74	440 aa		4.69	□□□□□ -1.66
AIM4	YBR194W	TY1A-LR3	P0CX75	440 aa		4.69	□□□□□ -1.66
AIM4	YBR194W	TY1A-ML2	P0CX76	440 aa		4.69	□□□□□ -1.66
AIM4	YBR194W	ARL1	P38116	183 aa	Known RBP	4.69	□□□□□ -1.66
AIM4	YBR194W	CIC1	P38779	376 aa	Known RBP	4.69	□□□□□ -1.66
AIM4	YBR194W	MON1	P53129	644 aa		4.69	□□□□□ -1.66
AIM4	YBR194W	NOG1	Q02892	647 aa	Known RBP	4.69	□□□□□ -1.66
AIM4	YBR194W	TY1A-GR1	Q12085	440 aa		4.69	□□□□□ -1.66
AIM4	YBR194W	YLL054C	Q12244	843 aa		4.69	□□□□□ -1.66
AIM4	YBR194W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.69	□□□□□ -1.66
AIM4	YBR194W	TY1A-OL	Q92392	440 aa	Known RBP	4.69	□□□□□ -1.66
AIM4	YBR194W	CHS2	P14180	963 aa		4.68	□□□□□ -1.66
AIM4	YBR194W	MCM5	P29496	775 aa	Known RBP	4.68	□□□□□ -1.66
AIM4	YBR194W	EXO5	P38289	585 aa		4.68	□□□□□ -1.66
AIM4	YBR194W	SPO74	P45819	413 aa		4.68	□□□□□ -1.66
AIM4	YBR194W	CTH1	P47976	325 aa		4.68	□□□□□ -1.66
AIM4	YBR194W	TOS4	Q06266	489 aa		4.68	□□□□□ -1.66
AIM4	YBR194W	GIC2	Q06648	383 aa		4.68	□□□□□ -1.66
AIM4	YBR194W	MED7	Q08278	222 aa		4.68	□□□□□ -1.66
AIM4	YBR194W	MSB1	P21339	1137 aa	Known RBP	4.67	□□□□□ -1.66
AIM4	YBR194W	GPT2	P36148	743 aa		4.67	□□□□□ -1.66
AIM4	YBR194W	OMA1	P36163	345 aa		4.67	□□□□□ -1.66
AIM4	YBR194W	DAK2	P43550	591 aa		4.67	□□□□□ -1.66
AIM4	YBR194W	YMR074C	Q04773	145 aa		4.67	□□□□□ -1.66
AIM4	YBR194W	SEC20	P28791	383 aa		4.66	□□□□□ -1.66
AIM4	YBR194W	GCD6	P32501	712 aa	Known RBP	4.66	□□□□□ -1.66
AIM4	YBR194W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.66	□□□□□ -1.66	RIP-Chip
AIM4	YBR194W	PRP40	P33203	583 aa	Known RBP	4.66	□□□□□ -1.66
AIM4	YBR194W	REI1	P38344	393 aa	Predicted RBP	4.66	□□□□□ -1.66
AIM4	YBR194W	IPL1	P38991	367 aa		4.66	□□□□□ -1.66
AIM4	YBR194W	YGR130C	P53278	816 aa		4.66	□□□□□ -1.66
AIM4	YBR194W	DOT1	Q04089	582 aa	Known RBP	4.66	□□□□□ -1.66
AIM4	YBR194W	NEM1	P38757	446 aa		4.65	□□□□□ -1.67
AIM4	YBR194W	YGR045C	P53229	120 aa		4.65	□□□□□ -1.67
AIM4	YBR194W	NOP8	Q08287	484 aa	Predicted RBP	4.65	□□□□□ -1.67
AIM4	YBR194W	UGA4	P32837	571 aa		4.64	□□□□□ -1.67
AIM4	YBR194W	TOS1	P38288	455 aa		4.64	□□□□□ -1.67
AIM4	YBR194W	SLS1	P42900	643 aa		4.64	□□□□□ -1.67
AIM4	YBR194W	MAG2	Q06436	670 aa	Known RBP	4.64	□□□□□ -1.67
AIM4	YBR194W	CYC7	P00045	113 aa		4.63	□□□□□ -1.67
AIM4	YBR194W	HXK1	P04806	485 aa	Known RBP	4.63	□□□□□ -1.67
AIM4	YBR194W	MAC1	P35192	417 aa		4.63	□□□□□ -1.67
AIM4	YBR194W	YKL077W	P36081	392 aa		4.63	□□□□□ -1.67
AIM4	YBR194W	RDH54	P38086	958 aa		4.63	□□□□□ -1.67
AIM4	YBR194W	SHU2	P38957	223 aa		4.63	□□□□□ -1.67
AIM4	YBR194W	MSH4	P40965	878 aa	Predicted RBP	4.63	□□□□□ -1.67
AIM4	YBR194W	ALT1	P52893	592 aa		4.63	□□□□□ -1.67
AIM4	YBR194W	ULP1	Q02724	621 aa		4.63	□□□□□ -1.67
AIM4	YBR194W	YPL109C	Q02981	657 aa		4.63	□□□□□ -1.67
AIM4	YBR194W	DAL4	Q04895	635 aa		4.63	□□□□□ -1.67
AIM4	YBR194W	BRE4	Q07660	1125 aa		4.63	□□□□□ -1.67
AIM4	YBR194W	ALG6	Q12001	544 aa	Known RBP	4.63	□□□□□ -1.67
AIM4	YBR194W	HEM13	P11353	328 aa	Known RBP	4.62	□□□□□ -1.67
AIM4	YBR194W	KAR2	P16474	682 aa	Known RBP	4.62	□□□□□ -1.67
AIM4	YBR194W	MSH3	P25336	1018 aa		4.62	□□□□□ -1.67
AIM4	YBR194W	SEA4	P38164	1038 aa		4.62	□□□□□ -1.67
AIM4	YBR194W	MMM1	P41800	426 aa		4.62	□□□□□ -1.67
AIM4	YBR194W	YML020W	Q03722	664 aa		4.62	□□□□□ -1.67
AIM4	YBR194W	UTP5	Q04177	643 aa	Known RBP	4.62	□□□□□ -1.67
AIM4	YBR194W	GCD1	P09032	578 aa	Predicted RBP	4.61	□□□□□ -1.67
AIM4	YBR194W	RPS4A	P0CX35	261 aa	Known RBP	4.61	□□□□□ -1.67
AIM4	YBR194W	RPS4B	P0CX36	261 aa	Known RBP	4.61	□□□□□ -1.67
AIM4	YBR194W	WHI3	P34761	661 aa	Known RBP	4.61	□□□□□ -1.67
AIM4	YBR194W	CIT3	P43635	486 aa		4.61	□□□□□ -1.67
AIM4	YBR194W	EAR1	Q03212	550 aa		4.61	□□□□□ -1.67
AIM4	YBR194W	ADI1	Q03677	179 aa		4.61	□□□□□ -1.67
AIM4	YBR194W	SMY2	P32909	740 aa	Known RBP	4.6	□□□□□ -1.67
AIM4	YBR194W	PEX28	P38848	579 aa		4.6	□□□□□ -1.67
AIM4	YBR194W	FAA3	P39002	694 aa		4.6	□□□□□ -1.67
AIM4	YBR194W	PIC2	P40035	300 aa		4.6	□□□□□ -1.67
AIM4	YBR194W	OYE3	P41816	400 aa	Predicted RBP	4.6	□□□□□ -1.67
AIM4	YBR194W	THI12	P42883	340 aa		4.6	□□□□□ -1.67
AIM4	YBR194W	THI5	P43534	340 aa		4.6	□□□□□ -1.67
AIM4	YBR194W	THI11	P47183	340 aa		4.6	□□□□□ -1.67
AIM4	YBR194W	ELA1	P53861	379 aa	Predicted RBP	4.6	□□□□□ -1.67
AIM4	YBR194W	RRP15	Q06511	250 aa	Predicted RBP	4.6	□□□□□ -1.67
AIM4	YBR194W	THI13	Q07748	340 aa		4.6	□□□□□ -1.67
AIM4	YBR194W	OXR1	Q08952	273 aa		4.6	□□□□□ -1.67
AIM4	YBR194W	VMA4	P22203	233 aa	Known RBP	4.59	□□□□□ -1.67
AIM4	YBR194W	YGL140C	P53120	1219 aa		4.59	□□□□□ -1.67
AIM4	YBR194W	RCM1	P53972	490 aa		4.59	□□□□□ -1.67
AIM4	YBR194W	YOR059C	Q08448	450 aa	Known RBP	4.59	□□□□□ -1.67
AIM4	YBR194W	NFS1	P25374	497 aa		4.58	□□□□□ -1.68
AIM4	YBR194W	RPT1	P33299	467 aa	Known RBP	4.58	□□□□□ -1.68
AIM4	YBR194W	SLD2	P34252	453 aa		4.58	□□□□□ -1.68
AIM4	YBR194W	NNK1	P36003	928 aa		4.58	□□□□□ -1.68
AIM4	YBR194W	PEX7	P39108	375 aa		4.58	□□□□□ -1.68
AIM4	YBR194W	AVO1	Q08236	1176 aa		4.58	□□□□□ -1.68
AIM4	YBR194W	YVC1	Q12324	675 aa		4.58	□□□□□ -1.68
AIM4	YBR194W	SEC23	P15303	768 aa	Known RBP	4.57	□□□□□ -1.68
AIM4	YBR194W	ATE1	P16639	503 aa		4.57	□□□□□ -1.68
AIM4	YBR194W	LIP5	P32875	414 aa		4.57	□□□□□ -1.68
AIM4	YBR194W	YAR028W	P39548	234 aa		4.57	□□□□□ -1.68
AIM4	YBR194W	MTR4	P47047	1073 aa	Known RBP	4.57	□□□□□ -1.68
AIM4	YBR194W	YJR107W	P47145	328 aa		4.57	□□□□□ -1.68
AIM4	YBR194W	YGR122W	P53272	402 aa		4.57	□□□□□ -1.68
AIM4	YBR194W	PEX13	P80667	386 aa		4.57	□□□□□ -1.68
AIM4	YBR194W	XKS1	P42826	600 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 86.4 ms