RNA–Protein interactions for RNA: YBR106W

PHO88, Transcript of Probable membrane protein, yeast

Gene PHO88, Length 567 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PHO88	YBR106W	RIM11	P38615	370 aa		4.6	□□□□□ -1.67
PHO88	YBR106W	PIC2	P40035	300 aa		4.6	□□□□□ -1.67
PHO88	YBR106W	IRR1	P40541	1150 aa		4.6	□□□□□ -1.67
PHO88	YBR106W	YGL140C	P53120	1219 aa		4.6	□□□□□ -1.67
PHO88	YBR106W	SIW14	P53965	281 aa		4.6	□□□□□ -1.67
PHO88	YBR106W	PEX13	P80667	386 aa		4.6	□□□□□ -1.67
PHO88	YBR106W	TOS4	Q06266	489 aa		4.6	□□□□□ -1.67
PHO88	YBR106W	YLR125W	Q12138	136 aa		4.6	□□□□□ -1.67
PHO88	YBR106W	YLL054C	Q12244	843 aa		4.6	□□□□□ -1.67
PHO88	YBR106W	TY1A-DR3	Q12441	440 aa		4.6	□□□□□ -1.67
PHO88	YBR106W	MSH3	P25336	1018 aa		4.59	□□□□□ -1.67
PHO88	YBR106W	LYP1	P32487	611 aa		4.59	□□□□□ -1.67
PHO88	YBR106W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
PHO88	YBR106W	PBY1	P38254	753 aa		4.59	□□□□□ -1.67
PHO88	YBR106W	OSH7	P38755	437 aa		4.59	□□□□□ -1.67
PHO88	YBR106W	DNA2	P38859	1522 aa		4.59	□□□□□ -1.67
PHO88	YBR106W	XKS1	P42826	600 aa		4.59	□□□□□ -1.67
PHO88	YBR106W	TIM54	P47045	478 aa		4.59	□□□□□ -1.67
PHO88	YBR106W	MTR4	P47047	1073 aa	Known RBP	4.59	□□□□□ -1.67
PHO88	YBR106W	PPT1	P53043	513 aa		4.59	□□□□□ -1.67
PHO88	YBR106W	HUL5	P53119	910 aa		4.59	□□□□□ -1.67
PHO88	YBR106W	TYW3	P53177	273 aa		4.59	□□□□□ -1.67
PHO88	YBR106W	GLO4	Q12320	285 aa		4.59	□□□□□ -1.67
PHO88	YBR106W	GAL11	P19659	1081 aa		4.58	□□□□□ -1.68
PHO88	YBR106W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
PHO88	YBR106W	DUT1	P33317	147 aa		4.58	□□□□□ -1.68
PHO88	YBR106W	GLY1	P37303	387 aa	Known RBP	4.58	□□□□□ -1.68
PHO88	YBR106W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.58	□□□□□ -1.68	not detected
PHO88	YBR106W	INP51	P40559	946 aa	Known RBP	4.58	□□□□□ -1.68
PHO88	YBR106W	HUL4	P40985	892 aa		4.58	□□□□□ -1.68
PHO88	YBR106W	NOP2	P40991	618 aa	Known RBP	4.58	□□□□□ -1.68
PHO88	YBR106W	CLA4	P48562	842 aa		4.58	□□□□□ -1.68
PHO88	YBR106W	ERP6	P53198	216 aa		4.58	□□□□□ -1.68
PHO88	YBR106W	BIO5	P53744	561 aa	Known RBP	4.58	□□□□□ -1.68
PHO88	YBR106W	CMR1	Q12510	522 aa	Known RBP	4.58	□□□□□ -1.68
PHO88	YBR106W	YGR161W-C	Q3E744	92 aa		4.58	□□□□□ -1.68
PHO88	YBR106W	PHO8	P11491	566 aa		4.57	□□□□□ -1.68
PHO88	YBR106W	PRP9	P19736	530 aa	Known RBP	4.57	□□□□□ -1.68
PHO88	YBR106W	HSP60	P19882	572 aa	Known RBP	4.57	□□□□□ -1.68
PHO88	YBR106W	DIT1	P21623	536 aa		4.57	□□□□□ -1.68
PHO88	YBR106W	BAS1	P22035	811 aa		4.57	□□□□□ -1.68
PHO88	YBR106W	FPS1	P23900	669 aa		4.57	□□□□□ -1.68
PHO88	YBR106W	NUP82	P40368	713 aa		4.57	□□□□□ -1.68
PHO88	YBR106W	AIR1	P40507	360 aa	Known RBP	4.57	□□□□□ -1.68
PHO88	YBR106W	MSH4	P40965	878 aa	Predicted RBP	4.57	□□□□□ -1.68
PHO88	YBR106W	FET4	P40988	552 aa		4.57	□□□□□ -1.68
PHO88	YBR106W	SCW11	P53189	542 aa		4.57	□□□□□ -1.68
PHO88	YBR106W	TPO2	P53283	614 aa		4.57	□□□□□ -1.68
PHO88	YBR106W	YNR040W	P53736	256 aa		4.57	□□□□□ -1.68
PHO88	YBR106W	RKM2	Q03942	479 aa		4.57	□□□□□ -1.68
PHO88	YBR106W	SOG2	Q08817	791 aa		4.57	□□□□□ -1.68
PHO88	YBR106W	FLC1	Q08967	793 aa		4.57	□□□□□ -1.68
PHO88	YBR106W	COB	P00163	385 aa		4.56	□□□□□ -1.68
PHO88	YBR106W	CCP1	P00431	361 aa		4.56	□□□□□ -1.68
PHO88	YBR106W	CDC19	P00549	500 aa	Known RBP	4.56	□□□□□ -1.68
PHO88	YBR106W	PRI2	P20457	528 aa		4.56	□□□□□ -1.68
PHO88	YBR106W	UGA4	P32837	571 aa		4.56	□□□□□ -1.68
PHO88	YBR106W	ADD66	P36040	267 aa		4.56	□□□□□ -1.68
PHO88	YBR106W	TAT2	P38967	592 aa		4.56	□□□□□ -1.68
PHO88	YBR106W	BRE2	P43132	505 aa		4.56	□□□□□ -1.68
PHO88	YBR106W	UTP22	P53254	1237 aa	Predicted RBP	4.56	□□□□□ -1.68
PHO88	YBR106W	YGR125W	P53273	1036 aa		4.56	□□□□□ -1.68
PHO88	YBR106W	YMR265C	Q03508	461 aa	Known RBP	4.56	□□□□□ -1.68
PHO88	YBR106W	URN1	Q06525	465 aa	Known RBP	4.56	□□□□□ -1.68
PHO88	YBR106W	LAP2	Q10740	671 aa		4.56	□□□□□ -1.68
PHO88	YBR106W	RKM4	Q12504	494 aa		4.56	□□□□□ -1.68
PHO88	YBR106W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
PHO88	YBR106W	HTS1	P07263	546 aa	Known RBP	4.55	□□□□□ -1.68
PHO88	YBR106W	IDI1	P15496	288 aa		4.55	□□□□□ -1.68
PHO88	YBR106W	CDC11	P32458	415 aa		4.55	□□□□□ -1.68
PHO88	YBR106W	DUR3	P33413	735 aa		4.55	□□□□□ -1.68
PHO88	YBR106W	RDH54	P38086	958 aa		4.55	□□□□□ -1.68
PHO88	YBR106W	UTP8	P53276	713 aa	Known RBP	4.55	□□□□□ -1.68
PHO88	YBR106W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
PHO88	YBR106W	EST2	Q06163	884 aa		4.55	□□□□□ -1.68
PHO88	YBR106W	HDA2	Q06629	674 aa		4.55	□□□□□ -1.68
PHO88	YBR106W	YDR461C-A	Q2V2P7	80 aa		4.55	□□□□□ -1.68
PHO88	YBR106W	TRP2	P00899	507 aa	Known RBP	4.54	□□□□□ -1.68
PHO88	YBR106W	THI4	P32318	326 aa		4.54	□□□□□ -1.68
PHO88	YBR106W	RER2	P35196	286 aa		4.54	□□□□□ -1.68
PHO88	YBR106W	YBR184W	P38299	523 aa		4.54	□□□□□ -1.68
PHO88	YBR106W	HSE1	P38753	452 aa		4.54	□□□□□ -1.68
PHO88	YBR106W	MNN1	P39106	762 aa		4.54	□□□□□ -1.68
PHO88	YBR106W	GEM1	P39722	662 aa		4.54	□□□□□ -1.68
PHO88	YBR106W	RSP5	P39940	809 aa	Known RBP	4.54	□□□□□ -1.68
PHO88	YBR106W	YJR124C	P47159	448 aa		4.54	□□□□□ -1.68
PHO88	YBR106W	EEB1	Q02891	456 aa		4.54	□□□□□ -1.68
PHO88	YBR106W	EAF1	Q06337	982 aa		4.54	□□□□□ -1.68
PHO88	YBR106W	OPT2	Q06593	877 aa		4.54	□□□□□ -1.68
PHO88	YBR106W	SLP1	Q12232	587 aa		4.54	□□□□□ -1.68
PHO88	YBR106W	CIT1	P00890	479 aa		4.53	□□□□□ -1.68
PHO88	YBR106W	HVG1	P0CE11	249 aa		4.53	□□□□□ -1.68
PHO88	YBR106W	SBP1	P10080	294 aa	Known RBP	4.53	□□□□□ -1.68
PHO88	YBR106W	SYP1	P25623	870 aa	Known RBP	4.53	□□□□□ -1.68
PHO88	YBR106W	ARE1	P25628	610 aa		4.53	□□□□□ -1.68
PHO88	YBR106W	RPL8B	P29453	256 aa	Known RBP	4.53	□□□□□ -1.68
PHO88	YBR106W	TOM20	P35180	183 aa		4.53	□□□□□ -1.68
PHO88	YBR106W	EXO5	P38289	585 aa		4.53	□□□□□ -1.68
PHO88	YBR106W	YJL181W	P46987	611 aa		4.53	□□□□□ -1.68
PHO88	YBR106W	GCV1	P48015	400 aa		4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms