RNA–Protein interactions for RNA: YBR028C

YPK3, Transcript of AGC kinase, yeastyeast

Gene YPK3, Length 1,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPK3YBR028C TY1A-LR2P0CX72 440 aa6.81□□□□□ -1.32
YPK3YBR028C TY1A-PLP0CX73 440 aa6.81□□□□□ -1.32
YPK3YBR028C TY1A-JR1P0CX74 440 aa6.81□□□□□ -1.32
YPK3YBR028C TY1A-LR3P0CX75 440 aa6.81□□□□□ -1.32
YPK3YBR028C TY1A-ML2P0CX76 440 aa6.81□□□□□ -1.32
YPK3YBR028C FAA4P47912 694 aaKnown RBP6.81□□□□□ -1.32
YPK3YBR028C GIS4Q04233 774 aa6.81□□□□□ -1.32
YPK3YBR028C HPF1Q05164 967 aa6.81□□□□□ -1.32
YPK3YBR028C TY1A-GR1Q12085 440 aa6.81□□□□□ -1.32
YPK3YBR028C TY1A-PR3Q6Q5H1 440 aaKnown RBP6.81□□□□□ -1.32
YPK3YBR028C TY1A-OLQ92392 440 aaKnown RBP6.81□□□□□ -1.32
YPK3YBR028C NEO1P40527 1151 aa6.8□□□□□ -1.32
YPK3YBR028C RDH54P38086 958 aa6.79□□□□□ -1.32
YPK3YBR028C NNF1P47149 201 aa6.79□□□□□ -1.32
YPK3YBR028C CWC24P53769 259 aa6.79□□□□□ -1.32
YPK3YBR028C HDA2Q06629 674 aa6.79□□□□□ -1.32
YPK3YBR028C MRL1Q06815 381 aa6.79□□□□□ -1.32
YPK3YBR028C RTT10Q08924 1013 aa6.79□□□□□ -1.32
YPK3YBR028C SSF2Q12153 453 aaPredicted RBP6.79□□□□□ -1.32
YPK3YBR028C SHU2P38957 223 aa6.78□□□□□ -1.32
YPK3YBR028C GDE1Q02979 1223 aa6.78□□□□□ -1.32
YPK3YBR028C PGM2P37012 569 aaKnown RBP6.78□□□□□ -1.32
YPK3YBR028C PAN5P38787 379 aa6.78□□□□□ -1.32
YPK3YBR028C GIP2P40036 548 aa6.78□□□□□ -1.32
YPK3YBR028C YGR053CP53234 283 aa6.78□□□□□ -1.32
YPK3YBR028C YIG1Q08956 461 aa6.78□□□□□ -1.32
YPK3YBR028C REC8Q12188 680 aa6.78□□□□□ -1.32
YPK3YBR028C HXT13P39924 564 aa6.77□□□□□ -1.33
YPK3YBR028C TED1P40533 473 aa6.77□□□□□ -1.33
YPK3YBR028C LEM3P42838 414 aa6.77□□□□□ -1.33
YPK3YBR028C UTP22P53254 1237 aaPredicted RBP6.77□□□□□ -1.33
YPK3YBR028C HXT17P53631 564 aa6.77□□□□□ -1.33
YPK3YBR028C HXT15P54854 567 aa6.77□□□□□ -1.33
YPK3YBR028C EEB1Q02891 456 aa6.77□□□□□ -1.33
YPK3YBR028C DPH6Q12429 685 aa6.77□□□□□ -1.33
YPK3YBR028C YTA7P40340 1379 aa6.76□□□□□ -1.33
YPK3YBR028C YKL077WP36081 392 aa6.76□□□□□ -1.33
YPK3YBR028C ALG14P38242 237 aa6.76□□□□□ -1.33
YPK3YBR028C NEM1P38757 446 aa6.76□□□□□ -1.33
YPK3YBR028C TAF13P11747 167 aa6.75□□□□□ -1.33
YPK3YBR028C GBP2P25555 427 aaKnown RBP RIP-Chip data6.75□□□□□ -1.33not detected
YPK3YBR028C SLP1Q12232 587 aa6.75□□□□□ -1.33
YPK3YBR028C VMA4P22203 233 aaKnown RBP6.74□□□□□ -1.33
YPK3YBR028C POL5P39985 1022 aaKnown RBP6.74□□□□□ -1.33
YPK3YBR028C SLS1P42900 643 aa6.74□□□□□ -1.33
YPK3YBR028C SIW14P53965 281 aa6.74□□□□□ -1.33
YPK3YBR028C SPO71Q03868 1245 aa6.74□□□□□ -1.33
YPK3YBR028C YGR035CP53222 116 aa6.74□□□□□ -1.33
YPK3YBR028C UTP5Q04177 643 aaKnown RBP6.74□□□□□ -1.33
YPK3YBR028C PRI2P20457 528 aa6.73□□□□□ -1.33
YPK3YBR028C ROD1Q02805 837 aa6.73□□□□□ -1.33
YPK3YBR028C WRS1Q12109 432 aaKnown RBP6.73□□□□□ -1.33
YPK3YBR028C TY4B-PA0A0B7P3V8 1104 aa6.72□□□□□ -1.33
YPK3YBR028C SCP160P06105 1222 aaKnown RBP RIP-Chip data6.72□□□□□ -1.33not detected
YPK3YBR028C YKL069WP36088 180 aa6.72□□□□□ -1.33
YPK3YBR028C TAT2P38967 592 aa6.72□□□□□ -1.33
YPK3YBR028C TMA46Q12000 345 aaKnown RBP6.72□□□□□ -1.33
YPK3YBR028C YOL098CQ12496 1037 aa6.72□□□□□ -1.33
YPK3YBR028C TY4A-HQ6Q5P6 413 aa6.72□□□□□ -1.33
YPK3YBR028C NHA1Q99271 985 aa6.72□□□□□ -1.33
YPK3YBR028C ERS1P17261 260 aa6.71□□□□□ -1.34
YPK3YBR028C GCV1P48015 400 aa6.71□□□□□ -1.34
YPK3YBR028C MEC3Q02574 474 aa6.71□□□□□ -1.34
YPK3YBR028C OPI10Q08202 246 aa6.71□□□□□ -1.34
YPK3YBR028C DED1P06634 604 aaKnown RBP6.7□□□□□ -1.34
YPK3YBR028C RER2P35196 286 aa6.7□□□□□ -1.34
YPK3YBR028C IOC3P43596 787 aa6.7□□□□□ -1.34
YPK3YBR028C NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.7□□□□□ -1.34not detected
YPK3YBR028C ELG1Q12050 791 aa6.7□□□□□ -1.34
YPK3YBR028C TRP2P00899 507 aaKnown RBP6.69□□□□□ -1.34
YPK3YBR028C SAC7P17121 654 aa6.69□□□□□ -1.34
YPK3YBR028C RAD27P26793 382 aa6.69□□□□□ -1.34
YPK3YBR028C ARL1P38116 183 aaKnown RBP6.69□□□□□ -1.34
YPK3YBR028C MTR4P47047 1073 aaKnown RBP6.69□□□□□ -1.34
YPK3YBR028C ENT3P47160 408 aa6.69□□□□□ -1.34
YPK3YBR028C EST2Q06163 884 aa6.69□□□□□ -1.34
YPK3YBR028C MKK2P32491 506 aa6.69□□□□□ -1.34
YPK3YBR028C FAL1Q12099 399 aaKnown RBP6.69□□□□□ -1.34
YPK3YBR028C BAS1P22035 811 aa6.68□□□□□ -1.34
YPK3YBR028C GRX1P25373 110 aaKnown RBP6.68□□□□□ -1.34
YPK3YBR028C REI1P38344 393 aaPredicted RBP6.68□□□□□ -1.34
YPK3YBR028C SPF1P39986 1215 aaKnown RBP6.68□□□□□ -1.34
YPK3YBR028C RAT1Q02792 1006 aaKnown RBP6.68□□□□□ -1.34
YPK3YBR028C ADD66P36040 267 aa6.67□□□□□ -1.34
YPK3YBR028C SBE2P42223 864 aaKnown RBP6.67□□□□□ -1.34
YPK3YBR028C SPO74P45819 413 aa6.67□□□□□ -1.34
YPK3YBR028C YJL049WP47048 450 aa6.67□□□□□ -1.34
YPK3YBR028C TYW3P53177 273 aa6.67□□□□□ -1.34
YPK3YBR028C ESC2Q06340 456 aa6.67□□□□□ -1.34
YPK3YBR028C ALG6Q12001 544 aaKnown RBP6.67□□□□□ -1.34
YPK3YBR028C LYP1P32487 611 aa6.66□□□□□ -1.34
YPK3YBR028C AFG2P32794 780 aa6.66□□□□□ -1.34
YPK3YBR028C TDA5Q06417 326 aaKnown RBP6.66□□□□□ -1.34
YPK3YBR028C AIM44Q99299 758 aa6.66□□□□□ -1.34
YPK3YBR028C MAE1P36013 669 aaKnown RBP6.65□□□□□ -1.34
YPK3YBR028C RRM3P38766 723 aa6.65□□□□□ -1.34
YPK3YBR028C FAR11P53917 953 aa6.65□□□□□ -1.34
YPK3YBR028C RKM2Q03942 479 aa6.65□□□□□ -1.34
YPK3YBR028C YMR074CQ04773 145 aa6.65□□□□□ -1.34
YPK3YBR028C SEA4P38164 1038 aa6.65□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 74.2 ms