RNA–Protein interactions for RNA: YAL021C

CCR4, Transcript of Component of the CCR4-NOT transcriptional complex, yeastyeast

Gene CCR4, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCR4YAL021C ADH4P10127 382 aa8□□□□□ -1.13
CCR4YAL021C VMA1P17255 1071 aaKnown RBP8□□□□□ -1.13
CCR4YAL021C MRM1P25270 412 aa8□□□□□ -1.13
CCR4YAL021C SMY1P32364 656 aaKnown RBP8□□□□□ -1.13
CCR4YAL021C SLA2P33338 968 aa8□□□□□ -1.13
CCR4YAL021C MET1P36150 593 aa8□□□□□ -1.13
CCR4YAL021C HSM3P38348 480 aa8□□□□□ -1.13
CCR4YAL021C SIP3P38717 1229 aa8□□□□□ -1.13
CCR4YAL021C SAK1P38990 1142 aa8□□□□□ -1.13
CCR4YAL021C YTA6P40328 754 aa8□□□□□ -1.13
CCR4YAL021C DAS1P47005 663 aa8□□□□□ -1.13
CCR4YAL021C YGL242CP53066 181 aa8□□□□□ -1.13
CCR4YAL021C PDS5Q04264 1277 aa8□□□□□ -1.13
CCR4YAL021C PUF6Q04373 656 aaKnown RBP8□□□□□ -1.13
CCR4YAL021C CMS1Q07897 291 aaKnown RBP8□□□□□ -1.13
CCR4YAL021C MET7Q08645 548 aa8□□□□□ -1.13
CCR4YAL021C RPB4P20433 221 aaPredicted RBP7.99□□□□□ -1.13
CCR4YAL021C CDC10P25342 322 aaKnown RBP7.99□□□□□ -1.13
CCR4YAL021C RTG2P32608 588 aaKnown RBP7.99□□□□□ -1.13
CCR4YAL021C LHS1P36016 881 aa7.99□□□□□ -1.13
CCR4YAL021C HEL1P36113 551 aa7.99□□□□□ -1.13
CCR4YAL021C RTS1P38903 757 aa7.99□□□□□ -1.13
CCR4YAL021C MPT5P39016 859 aaKnown RBP RIP-Chip data7.99□□□□□ -1.13not detected
CCR4YAL021C PRP31P49704 494 aaPredicted RBP7.99□□□□□ -1.13
CCR4YAL021C ESF2P53743 316 aaKnown RBP7.99□□□□□ -1.13
CCR4YAL021C IRC3Q06683 689 aa7.99□□□□□ -1.13
CCR4YAL021C FUS1P11710 512 aa7.99□□□□□ -1.13
CCR4YAL021C PTR2P32901 601 aa7.99□□□□□ -1.13
CCR4YAL021C BMH2P34730 273 aaKnown RBP7.99□□□□□ -1.13
CCR4YAL021C VID28P40547 921 aa7.99□□□□□ -1.13
CCR4YAL021C RLP7P40693 322 aaKnown RBP7.99□□□□□ -1.13
CCR4YAL021C RKM1Q08961 583 aaPredicted RBP7.99□□□□□ -1.13
CCR4YAL021C YRF1-4O13559 1382 aa7.99□□□□□ -1.13
CCR4YAL021C YML133CQ03099 1374 aa7.99□□□□□ -1.13
CCR4YAL021C YLL067CQ07888 1374 aa7.99□□□□□ -1.13
CCR4YAL021C YLL066CQ99208 1374 aa7.99□□□□□ -1.13
CCR4YAL021C BUD31P25337 157 aaPredicted RBP7.98□□□□□ -1.13
CCR4YAL021C MNR2P35724 969 aa7.98□□□□□ -1.13
CCR4YAL021C MIC60P36112 540 aa7.98□□□□□ -1.13
CCR4YAL021C SVL3Q03088 825 aaKnown RBP7.98□□□□□ -1.13
CCR4YAL021C SRC1Q03707 834 aa7.98□□□□□ -1.13
CCR4YAL021C YOR352WQ08816 343 aa7.98□□□□□ -1.13
CCR4YAL021C RVB2Q12464 471 aaKnown RBP7.98□□□□□ -1.13
CCR4YAL021C CYC8P14922 966 aa7.98□□□□□ -1.13
CCR4YAL021C SLD2P34252 453 aa7.98□□□□□ -1.13
CCR4YAL021C SRL3P36167 246 aa7.98□□□□□ -1.13
CCR4YAL021C FYV8P46949 817 aaKnown RBP7.98□□□□□ -1.13
CCR4YAL021C JJJ2P46997 583 aa7.98□□□□□ -1.13
CCR4YAL021C YML108WQ03759 105 aa7.98□□□□□ -1.13
CCR4YAL021C RRN11Q04712 507 aa7.98□□□□□ -1.13
CCR4YAL021C MMR1Q06324 491 aa7.98□□□□□ -1.13
CCR4YAL021C SLK19Q08581 821 aaKnown RBP7.98□□□□□ -1.13
CCR4YAL021C GEA1P47102 1408 aaPredicted RBP7.97□□□□□ -1.13
CCR4YAL021C HNM1P19807 563 aa7.97□□□□□ -1.13
CCR4YAL021C HSP104P31539 908 aaKnown RBP7.97□□□□□ -1.13
CCR4YAL021C ECM4P36156 370 aa7.97□□□□□ -1.13
CCR4YAL021C PBY1P38254 753 aa7.97□□□□□ -1.13
CCR4YAL021C IRR1P40541 1150 aa7.97□□□□□ -1.13
CCR4YAL021C ASI1P54074 624 aa7.97□□□□□ -1.13
CCR4YAL021C HAP5Q02516 242 aa7.97□□□□□ -1.13
CCR4YAL021C ECM11Q04110 302 aa7.97□□□□□ -1.13
CCR4YAL021C SPP382Q06411 708 aaPredicted RBP7.97□□□□□ -1.13
CCR4YAL021C TSR1Q07381 788 aaKnown RBP7.97□□□□□ -1.13
CCR4YAL021C SSK2P53599 1579 aa7.97□□□□□ -1.13
CCR4YAL021C DPS1P04802 557 aaKnown RBP7.97□□□□□ -1.13
CCR4YAL021C SUI3P09064 285 aaKnown RBP7.97□□□□□ -1.13
CCR4YAL021C OTU2P38747 307 aaKnown RBP7.97□□□□□ -1.13
CCR4YAL021C PXA1P41909 870 aa7.97□□□□□ -1.13
CCR4YAL021C RPN4Q03465 531 aa7.97□□□□□ -1.13
CCR4YAL021C LCB5Q06147 687 aaKnown RBP7.97□□□□□ -1.13
CCR4YAL021C RRP36Q12481 300 aaPredicted RBP7.97□□□□□ -1.13
CCR4YAL021C GCN2P15442 1659 aa7.97□□□□□ -1.13
CCR4YAL021C SPE2P21182 396 aa7.96□□□□□ -1.13
CCR4YAL021C TRZ1P36159 838 aaPredicted RBP7.96□□□□□ -1.13
CCR4YAL021C REI1P38344 393 aaPredicted RBP7.96□□□□□ -1.13
CCR4YAL021C MON1P53129 644 aa7.96□□□□□ -1.13
CCR4YAL021C DIP5P53388 608 aa7.96□□□□□ -1.13
CCR4YAL021C ESBP6P53918 673 aa7.96□□□□□ -1.13
CCR4YAL021C RNH1Q04740 348 aa7.96□□□□□ -1.13
CCR4YAL021C RSA3Q05942 220 aaKnown RBP7.96□□□□□ -1.13
CCR4YAL021C TSR2Q06672 205 aaKnown RBP7.96□□□□□ -1.13
CCR4YAL021C YOL036WQ08206 761 aa7.96□□□□□ -1.13
CCR4YAL021C SYG1P40528 902 aa7.96□□□□□ -1.14
CCR4YAL021C SPN1Q06505 410 aaPredicted RBP7.96□□□□□ -1.14
CCR4YAL021C COP1P53622 1201 aaKnown RBP7.95□□□□□ -1.14
CCR4YAL021C CUS1Q02554 436 aaPredicted RBP7.95□□□□□ -1.14
CCR4YAL021C TCB1Q12466 1186 aa7.95□□□□□ -1.14
CCR4YAL021C REV3P14284 1504 aa7.95□□□□□ -1.14
CCR4YAL021C SCC2Q04002 1493 aa7.95□□□□□ -1.14
CCR4YAL021C PRT1P06103 763 aaKnown RBP7.95□□□□□ -1.14
CCR4YAL021C DSF1P0CX08 502 aa7.95□□□□□ -1.14
CCR4YAL021C YNR073CP0CX09 502 aa7.95□□□□□ -1.14
CCR4YAL021C PXA2P34230 853 aa7.95□□□□□ -1.14
CCR4YAL021C SSN8P47821 323 aa7.95□□□□□ -1.14
CCR4YAL021C TAF8Q03750 510 aa7.95□□□□□ -1.14
CCR4YAL021C ROM2P51862 1356 aaKnown RBP7.95□□□□□ -1.14
CCR4YAL021C SSC1P0CS90 654 aaKnown RBP7.94□□□□□ -1.14
CCR4YAL021C PKC1P24583 1151 aa7.94□□□□□ -1.14
CCR4YAL021C BMH1P29311 267 aaKnown RBP7.94□□□□□ -1.14
CCR4YAL021C YEL043WP32618 956 aa7.94□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 117.1 ms