RNA–Protein interactions for RNA: ENST00000640463.1

SPIN3-239, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,133 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-239ENST00000640463 METP08581 1390 aa17.52■□□□□ 0.39
SPIN3-239ENST00000640463 TWISTNBQ3B726 338 aaPredicted RBP17.52■□□□□ 0.39
SPIN3-239ENST00000640463 NUDT16Q96DE0 195 aaKnown RBP17.52■□□□□ 0.39
SPIN3-239ENST00000640463 HSCBQ8IWL3 235 aa17.51■□□□□ 0.39
SPIN3-239ENST00000640463 SIRT2Q8IXJ6 389 aa17.51■□□□□ 0.39
SPIN3-239ENST00000640463 IFT57Q9NWB7 429 aa17.51■□□□□ 0.39
SPIN3-239ENST00000640463 MCM4P33991 863 aa17.5■□□□□ 0.39
SPIN3-239ENST00000640463 COG3Q96JB2 828 aa17.5■□□□□ 0.39
SPIN3-239ENST00000640463 ZNF853P0CG23 659 aa17.49■□□□□ 0.39
SPIN3-239ENST00000640463 BRPF1P55201 1214 aaPredicted RBP17.49■□□□□ 0.39
SPIN3-239ENST00000640463 CHMP5Q9NZZ3 219 aa17.49■□□□□ 0.39
SPIN3-239ENST00000640463 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.49■□□□□ 0.39
SPIN3-239ENST00000640463 RIMBP3CA6NJZ7 1639 aa17.49■□□□□ 0.39
SPIN3-239ENST00000640463 RIMBP3BA6NNM3 1639 aa17.49■□□□□ 0.39
SPIN3-239ENST00000640463 RIMBP3Q9UFD9 1639 aa17.49■□□□□ 0.39
SPIN3-239ENST00000640463 CALD1Q05682 793 aaKnown RBP17.49■□□□□ 0.39
SPIN3-239ENST00000640463 ZNF428Q96B54 188 aa17.49■□□□□ 0.39
SPIN3-239ENST00000640463 CPSF1Q10570 1443 aaKnown RBP17.49■□□□□ 0.39
SPIN3-239ENST00000640463 EDC4Q6P2E9 1401 aaKnown RBP17.49■□□□□ 0.39
SPIN3-239ENST00000640463 NUTM2FA1L443 756 aa17.48■□□□□ 0.39
SPIN3-239ENST00000640463 CPS1P31327 1500 aa17.48■□□□□ 0.39
SPIN3-239ENST00000640463 DLC1Q96QB1 1528 aa17.48■□□□□ 0.39
SPIN3-239ENST00000640463 DLG5Q8TDM6 1919 aa17.48■□□□□ 0.39
SPIN3-239ENST00000640463 SETD1AO15047 1707 aaKnown RBP17.48■□□□□ 0.39
SPIN3-239ENST00000640463 AEBP1Q8IUX7 1158 aa17.47■□□□□ 0.39
SPIN3-239ENST00000640463 KRT24Q2M2I5 525 aa17.47■□□□□ 0.39
SPIN3-239ENST00000640463 CFAP44Q96MT7 982 aa17.47■□□□□ 0.39
SPIN3-239ENST00000640463 ARHGAP45Q92619 1136 aa17.47■□□□□ 0.39
SPIN3-239ENST00000640463 PTCH1Q13635 1447 aa17.46■□□□□ 0.39
SPIN3-239ENST00000640463 BMP2KLQ5H9B9 411 aa17.46■□□□□ 0.39
SPIN3-239ENST00000640463 GCC1Q96CN9 775 aa17.46■□□□□ 0.39
SPIN3-239ENST00000640463 CCDC61Q9Y6R9 512 aa17.46■□□□□ 0.39
SPIN3-239ENST00000640463 ABCC4O15439 1325 aa17.46■□□□□ 0.39
SPIN3-239ENST00000640463 RBM25P49756 843 aaKnown RBP17.46■□□□□ 0.39
SPIN3-239ENST00000640463 FOXD4L1Q9NU39 408 aa17.46■□□□□ 0.39
SPIN3-239ENST00000640463 SOX12O15370 315 aa17.45■□□□□ 0.38
SPIN3-239ENST00000640463 ZNF692Q9BU19 519 aaPredicted RBP17.45■□□□□ 0.38
SPIN3-239ENST00000640463 CDK12Q9NYV4 1490 aaPredicted RBP17.44■□□□□ 0.38
SPIN3-239ENST00000640463 TBC1D9Q6ZT07 1266 aa17.44■□□□□ 0.38
SPIN3-239ENST00000640463 RBM42Q9BTD8 480 aaKnown RBP17.44■□□□□ 0.38
SPIN3-239ENST00000640463 PIK3R4Q99570 1358 aa17.44■□□□□ 0.38
SPIN3-239ENST00000640463 PRR36Q9H6K5 1346 aa17.44■□□□□ 0.38
SPIN3-239ENST00000640463 SULT6B1Q6IMI4 303 aa17.43■□□□□ 0.38
SPIN3-239ENST00000640463 NRXN3Q9Y4C0 1643 aa17.43■□□□□ 0.38
SPIN3-239ENST00000640463 CD2BP2O95400 341 aaKnown RBP17.43■□□□□ 0.38
SPIN3-239ENST00000640463 SPATA31D1Q6ZQQ2 1576 aa17.43■□□□□ 0.38
SPIN3-239ENST00000640463 TRAK2O60296 914 aa17.43■□□□□ 0.38
SPIN3-239ENST00000640463 KIF2CQ99661 725 aa17.43■□□□□ 0.38
SPIN3-239ENST00000640463 HSP90AB1P08238 724 aaKnown RBP17.42■□□□□ 0.38
SPIN3-239ENST00000640463 LMOD3Q0VAK6 560 aa17.42■□□□□ 0.38
SPIN3-239ENST00000640463 CHMP4BQ9H444 224 aaKnown RBP17.42■□□□□ 0.38
SPIN3-239ENST00000640463 AATKQ6ZMQ8 1374 aa17.42■□□□□ 0.38
SPIN3-239ENST00000640463 MCM10Q7L590 875 aa17.42■□□□□ 0.38
SPIN3-239ENST00000640463 API5Q9BZZ5 524 aaKnown RBP17.41■□□□□ 0.38
SPIN3-239ENST00000640463 EIF4A2Q14240 407 aaKnown RBP17.41■□□□□ 0.38
SPIN3-239ENST00000640463 ESF1Q9H501 851 aaKnown RBP17.41■□□□□ 0.38
SPIN3-239ENST00000640463 L1TD1Q5T7N2 865 aaKnown RBP17.41■□□□□ 0.38
SPIN3-239ENST00000640463 C16orf71Q8IYS4 520 aaPredicted RBP17.41■□□□□ 0.38
SPIN3-239ENST00000640463 PPP6R1Q9UPN7 881 aa17.41■□□□□ 0.38
SPIN3-239ENST00000640463 APBB1O00213 710 aa17.4■□□□□ 0.38
SPIN3-239ENST00000640463 XRCC6P12956 609 aaKnown RBP eCLIP17.39■□□□□ 0.37
SPIN3-239ENST00000640463 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.39■□□□□ 0.37
SPIN3-239ENST00000640463 SNX21Q969T3 373 aa17.39■□□□□ 0.37
SPIN3-239ENST00000640463 DIP2BQ9P265 1576 aa17.39■□□□□ 0.37
SPIN3-239ENST00000640463 GOLGA6L3A6NEY3 463 aa17.39■□□□□ 0.37
SPIN3-239ENST00000640463 PANK2Q9BZ23 570 aa17.39■□□□□ 0.37
SPIN3-239ENST00000640463 GSPT1P15170 499 aaKnown RBP17.38■□□□□ 0.37
SPIN3-239ENST00000640463 AGLP35573 1532 aa17.38■□□□□ 0.37
SPIN3-239ENST00000640463 HSP90AA1P07900 732 aaKnown RBP17.38■□□□□ 0.37
SPIN3-239ENST00000640463 DDIT3P35638 169 aa17.38■□□□□ 0.37
SPIN3-239ENST00000640463 HSP90AB2PQ58FF8 381 aa17.38■□□□□ 0.37
SPIN3-239ENST00000640463 TNPO1Q92973 898 aaKnown RBP17.38■□□□□ 0.37
SPIN3-239ENST00000640463 MIS18AQ9NYP9 233 aa17.38■□□□□ 0.37
SPIN3-239ENST00000640463 KNDC1Q76NI1 1749 aa17.37■□□□□ 0.37
SPIN3-239ENST00000640463 NCOA3Q9Y6Q9 1424 aa17.37■□□□□ 0.37
SPIN3-239ENST00000640463 OTUD7AQ8TE49 926 aaPredicted RBP17.37■□□□□ 0.37
SPIN3-239ENST00000640463 MON2Q7Z3U7 1717 aa17.37■□□□□ 0.37
SPIN3-239ENST00000640463 PLEKHM2Q8IWE5 1019 aa17.36■□□□□ 0.37
SPIN3-239ENST00000640463 FAM43AQ8N2R8 423 aa17.36■□□□□ 0.37
SPIN3-239ENST00000640463 ROBO2Q9HCK4 1378 aa17.36■□□□□ 0.37
SPIN3-239ENST00000640463 ACEP12821 1306 aa17.35■□□□□ 0.37
SPIN3-239ENST00000640463 TTC21BQ7Z4L5 1316 aa17.35■□□□□ 0.37
SPIN3-239ENST00000640463 SMARCA5O60264 1052 aaPredicted RBP17.35■□□□□ 0.37
SPIN3-239ENST00000640463 CDC45O75419 566 aa17.35■□□□□ 0.37
SPIN3-239ENST00000640463 C3P01024 1663 aa17.35■□□□□ 0.37
SPIN3-239ENST00000640463 FSD2A1L4K1 749 aa17.34■□□□□ 0.37
SPIN3-239ENST00000640463 DCTPP1Q9H773 170 aa17.34■□□□□ 0.37
SPIN3-239ENST00000640463 ITSN1Q15811 1721 aa17.34■□□□□ 0.37
SPIN3-239ENST00000640463 REREQ9P2R6 1566 aa17.34■□□□□ 0.37
SPIN3-239ENST00000640463 FOXO3O43524 673 aa17.34■□□□□ 0.37
SPIN3-239ENST00000640463 AKAP12Q02952 1782 aa17.34■□□□□ 0.37
SPIN3-239ENST00000640463 DDX11L8A8MPP1 907 aa17.33■□□□□ 0.37
SPIN3-239ENST00000640463 INTS3Q68E01 1043 aaKnown RBP17.33■□□□□ 0.37
SPIN3-239ENST00000640463 RRAGDQ9NQL2 400 aaPredicted RBP17.33■□□□□ 0.37
SPIN3-239ENST00000640463 CHL1O00533 1208 aa17.33■□□□□ 0.36
SPIN3-239ENST00000640463 K7ELQ4 463 aaPredicted RBP17.32■□□□□ 0.36
SPIN3-239ENST00000640463 GAS2L2Q8NHY3 880 aa17.32■□□□□ 0.36
SPIN3-239ENST00000640463 MEIS3Q99687 375 aa17.32■□□□□ 0.36
SPIN3-239ENST00000640463 MSH6P52701 1360 aa17.32■□□□□ 0.36
SPIN3-239ENST00000640463 HDGFP51858 240 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms