RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 ESF1Q9H501 851 aaKnown RBP18.19■□□□□ 0.5
SCARB2-221ENST00000640341 PPIP5K1Q6PFW1 1433 aa18.18■□□□□ 0.5
SCARB2-221ENST00000640341 VIRMAQ69YN4 1812 aaKnown RBP18.18■□□□□ 0.5
SCARB2-221ENST00000640341 NCBP3Q53F19 620 aaKnown RBP18.18■□□□□ 0.5
SCARB2-221ENST00000640341 BMP2KLQ5H9B9 411 aa18.18■□□□□ 0.5
SCARB2-221ENST00000640341 ADGRB2O60241 1585 aa18.17■□□□□ 0.5
SCARB2-221ENST00000640341 IL13P35225 146 aa18.17■□□□□ 0.5
SCARB2-221ENST00000640341 GCC1Q96CN9 775 aa18.17■□□□□ 0.5
SCARB2-221ENST00000640341 NUDT16Q96DE0 195 aaKnown RBP18.17■□□□□ 0.5
SCARB2-221ENST00000640341 SMARCA5O60264 1052 aaPredicted RBP18.17■□□□□ 0.5
SCARB2-221ENST00000640341 SLC4A10Q6U841 1118 aa18.17■□□□□ 0.5
SCARB2-221ENST00000640341 PIK3C2BO00750 1634 aa18.17■□□□□ 0.5
SCARB2-221ENST00000640341 IFT57Q9NWB7 429 aa18.16■□□□□ 0.5
SCARB2-221ENST00000640341 LRRC7Q96NW7 1537 aa18.16■□□□□ 0.5
SCARB2-221ENST00000640341 WASLO00401 505 aaPredicted RBP18.16■□□□□ 0.5
SCARB2-221ENST00000640341 OTUD7AQ8TE49 926 aaPredicted RBP18.16■□□□□ 0.5
SCARB2-221ENST00000640341 ZMYM3Q14202 1370 aa18.15■□□□□ 0.5
SCARB2-221ENST00000640341 USP32Q8NFA0 1604 aa18.15■□□□□ 0.5
SCARB2-221ENST00000640341 RBM25P49756 843 aaKnown RBP18.15■□□□□ 0.5
SCARB2-221ENST00000640341 PNPLA6Q8IY17 1366 aa18.15■□□□□ 0.5
SCARB2-221ENST00000640341 DDX11L8A8MPP1 907 aa18.15■□□□□ 0.5
SCARB2-221ENST00000640341 NCLP19338 710 aaKnown RBP18.15■□□□□ 0.5
SCARB2-221ENST00000640341 CFAP44Q96MT7 982 aa18.14■□□□□ 0.49
SCARB2-221ENST00000640341 CHMP4BQ9H444 224 aaKnown RBP18.14■□□□□ 0.49
SCARB2-221ENST00000640341 NECTIN2Q92692 538 aa18.13■□□□□ 0.49
SCARB2-221ENST00000640341 GBP4Q96PP9 640 aa18.13■□□□□ 0.49
SCARB2-221ENST00000640341 API5Q9BZZ5 524 aaKnown RBP18.13■□□□□ 0.49
SCARB2-221ENST00000640341 SSFA2P28290 1259 aa18.13■□□□□ 0.49
SCARB2-221ENST00000640341 DIP2CQ9Y2E4 1556 aa18.12■□□□□ 0.49
SCARB2-221ENST00000640341 FAM135BQ49AJ0 1406 aa18.12■□□□□ 0.49
SCARB2-221ENST00000640341 ZNF692Q9BU19 519 aaPredicted RBP18.12■□□□□ 0.49
SCARB2-221ENST00000640341 GAS2L2Q8NHY3 880 aa18.12■□□□□ 0.49
SCARB2-221ENST00000640341 CDC45O75419 566 aa18.11■□□□□ 0.49
SCARB2-221ENST00000640341 GSPT1P15170 499 aaKnown RBP18.11■□□□□ 0.49
SCARB2-221ENST00000640341 NAP1L5Q96NT1 182 aaPredicted RBP18.11■□□□□ 0.49
SCARB2-221ENST00000640341 KIF2CQ99661 725 aa18.11■□□□□ 0.49
SCARB2-221ENST00000640341 MYO5BQ9ULV0 1848 aa18.11■□□□□ 0.49
SCARB2-221ENST00000640341 K7ELQ4 463 aaPredicted RBP18.11■□□□□ 0.49
SCARB2-221ENST00000640341 LMOD3Q0VAK6 560 aa18.11■□□□□ 0.49
SCARB2-221ENST00000640341 FOXD4L5Q5VV16 416 aaPredicted RBP18.11■□□□□ 0.49
SCARB2-221ENST00000640341 FOXD4L4Q8WXT5 416 aaPredicted RBP18.11■□□□□ 0.49
SCARB2-221ENST00000640341 CCDC61Q9Y6R9 512 aa18.11■□□□□ 0.49
SCARB2-221ENST00000640341 ZNF428Q96B54 188 aa18.11■□□□□ 0.49
SCARB2-221ENST00000640341 ZFYVE9O95405 1425 aa18.11■□□□□ 0.49
SCARB2-221ENST00000640341 GRPEL1Q9HAV7 217 aa18.1■□□□□ 0.49
SCARB2-221ENST00000640341 HSP90AB2PQ58FF8 381 aa18.1■□□□□ 0.49
SCARB2-221ENST00000640341 ARHGEF40Q8TER5 1519 aa18.1■□□□□ 0.49
SCARB2-221ENST00000640341 ARHGAP31Q2M1Z3 1444 aa18.09■□□□□ 0.49
SCARB2-221ENST00000640341 F6X3S4 739 aa18.09■□□□□ 0.49
SCARB2-221ENST00000640341 ARHGAP45Q92619 1136 aa18.09■□□□□ 0.49
SCARB2-221ENST00000640341 ALKQ9UM73 1620 aa18.09■□□□□ 0.49
SCARB2-221ENST00000640341 TSHZ3Q63HK5 1081 aa18.08■□□□□ 0.49
SCARB2-221ENST00000640341 PLEKHM2Q8IWE5 1019 aa18.08■□□□□ 0.49
SCARB2-221ENST00000640341 MEIS3Q99687 375 aa18.08■□□□□ 0.49
SCARB2-221ENST00000640341 NEO1Q92859 1461 aa18.08■□□□□ 0.49
SCARB2-221ENST00000640341 METP08581 1390 aa18.08■□□□□ 0.49
SCARB2-221ENST00000640341 PLEKHG5O94827 1062 aa18.08■□□□□ 0.48
SCARB2-221ENST00000640341 SLC4A2P04920 1241 aa18.08■□□□□ 0.48
SCARB2-221ENST00000640341 ABCC4O15439 1325 aa18.08■□□□□ 0.48
SCARB2-221ENST00000640341 FOXO3O43524 673 aa18.08■□□□□ 0.48
SCARB2-221ENST00000640341 MRE11P49959 708 aa18.08■□□□□ 0.48
SCARB2-221ENST00000640341 SNX21Q969T3 373 aa18.08■□□□□ 0.48
SCARB2-221ENST00000640341 CFAP74Q9C0B2 1584 aa18.08■□□□□ 0.48
SCARB2-221ENST00000640341 EIF4A2Q14240 407 aaKnown RBP18.07■□□□□ 0.48
SCARB2-221ENST00000640341 NOL8Q76FK4 1167 aaKnown RBP18.07■□□□□ 0.48
SCARB2-221ENST00000640341 TRIM44Q96DX7 344 aaPredicted RBP18.07■□□□□ 0.48
SCARB2-221ENST00000640341 FSD2A1L4K1 749 aa18.07■□□□□ 0.48
SCARB2-221ENST00000640341 ZNF853P0CG23 659 aa18.07■□□□□ 0.48
SCARB2-221ENST00000640341 GAS2L3Q86XJ1 694 aa18.07■□□□□ 0.48
SCARB2-221ENST00000640341 RIMS2Q9UQ26 1411 aa18.07■□□□□ 0.48
SCARB2-221ENST00000640341 DDX49Q9Y6V7 483 aaKnown RBP18.07■□□□□ 0.48
SCARB2-221ENST00000640341 GOLGA6L22H0YM25 854 aa18.05■□□□□ 0.48
SCARB2-221ENST00000640341 RAB3GAP1Q15042 981 aa18.05■□□□□ 0.48
SCARB2-221ENST00000640341 MCTP1Q6DN14 999 aa18.05■□□□□ 0.48
SCARB2-221ENST00000640341 TRHP20396 242 aaPredicted RBP18.04■□□□□ 0.48
SCARB2-221ENST00000640341 TPRNQ4KMQ1 711 aa18.04■□□□□ 0.48
SCARB2-221ENST00000640341 TMEM131LA2VDJ0 1609 aa18.04■□□□□ 0.48
SCARB2-221ENST00000640341 NUTM2GQ5VZR2 741 aa18.04■□□□□ 0.48
SCARB2-221ENST00000640341 SLC26A8Q96RN1 970 aa18.04■□□□□ 0.48
SCARB2-221ENST00000640341 PKP1Q13835 747 aa18.03■□□□□ 0.48
SCARB2-221ENST00000640341 CHAMP1Q96JM3 812 aa18.03■□□□□ 0.48
SCARB2-221ENST00000640341 MED14O60244 1454 aa18.03■□□□□ 0.48
SCARB2-221ENST00000640341 SDSP20132 328 aa18.03■□□□□ 0.48
SCARB2-221ENST00000640341 BRPF1P55201 1214 aaPredicted RBP18.03■□□□□ 0.48
SCARB2-221ENST00000640341 TTC22Q5TAA0 569 aa18.03■□□□□ 0.48
SCARB2-221ENST00000640341 RTF1Q92541 710 aaKnown RBP18.03■□□□□ 0.48
SCARB2-221ENST00000640341 DCTPP1Q9H773 170 aa18.03■□□□□ 0.48
SCARB2-221ENST00000640341 EXOC6BQ9Y2D4 811 aa18.02■□□□□ 0.48
SCARB2-221ENST00000640341 FOXD4L6Q3SYB3 417 aaPredicted RBP18.02■□□□□ 0.47
SCARB2-221ENST00000640341 FOXD4L3Q6VB84 417 aaPredicted RBP18.02■□□□□ 0.47
SCARB2-221ENST00000640341 G2E3Q7L622 706 aa18.02■□□□□ 0.47
SCARB2-221ENST00000640341 TSPYL4Q9UJ04 414 aa18.02■□□□□ 0.47
SCARB2-221ENST00000640341 PRR36Q9H6K5 1346 aa18.01■□□□□ 0.47
SCARB2-221ENST00000640341 LTV1Q96GA3 475 aaPredicted RBP18.01■□□□□ 0.47
SCARB2-221ENST00000640341 EDC4Q6P2E9 1401 aaKnown RBP18.01■□□□□ 0.47
SCARB2-221ENST00000640341 CEP85Q6P2H3 762 aa18.01■□□□□ 0.47
SCARB2-221ENST00000640341 CASC1Q6TDU7 716 aa18.01■□□□□ 0.47
SCARB2-221ENST00000640341 PTCH1Q13635 1447 aa18.01■□□□□ 0.47
SCARB2-221ENST00000640341 MSH6P52701 1360 aa18.01■□□□□ 0.47
SCARB2-221ENST00000640341 DDIT3P35638 169 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms